Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01475 ATGTTTGGCTGGAGAGGTGGATTGTTTGTAGAACTGGTTGTTTTTGCAGATATGTGTTTTTTAGTGTCTGGTTTAGGTTCAATGTCTCCTGTTGCTGTGTCTTATGGCGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTAGTCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTTACTGCTGGTGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCAAACCAACCTTATTGTTGGGGAAGTAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCTATGAGCAAAGGAGCTCAATATCAAGAAATCAGTGCTGGTGATTATCATCTCTGTGGACTTCGAATGCCTTTGACTGGAAGGCGTAGGAACATGTCTTTTGTGGATTGTTGGGGATATAACATGACTAGAACCTTTGAGTTTGATGGCCCTATTGAGTCGATCTCGGCGGGGTCTGAGTTCAATTGTGGACTGTTTTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACAAGCAGCCGGGTGATCAGTTTGATACCTAAAGATATGAGGTTTCAAAAGATTGCCTCTGGTGGATATCATGTTTGCGGGATTCTAGAGGGCATGCGGTCGAGAGCGTTCTGTTGGGGAAGGAGCTTAGACATTGAAGAGGAGATTTCGGTAGCATATTCGGGTGAAGGAAATGTAGACTTGGTTCCTGTTGATCCATTAGCTTCTGTTGTGGGGGGCAAGTTCCATGCCTGTGGGATCAAAAGCTCGGACCGTGGTGTGATTTGTTGGGGCTTTACAGTCAAACCGAGTACTCCGGCACCGGATGGGATTAAAGTTTACGACATTGCAGCTGGCGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTCTGCTGGGGGCTTGGATTTCCTACTTCTCTACCTTTAGCTGTCTCTCCTGGAATCTGTAAAGCAACTCCTTGTTCTCCGGGTTTCTACGAAATAAGCCAAGACAAAGCTCGGTGTAAGTCGCCAAGTTTTCATGTTTGCATGCCCTGCAGTACTGCTTGCCCTCCTGGGATGTACCAAAAATTTGAGTGTTCCTTAAAATCTGATAGGCAGTGTGAGTATAATTGTTCAAGTTGCTTTTCTGGTGAATGCATATCAAACTGTTCATCTATGATATCAAATGGTTTGTTGGTGAAGAAAAATGGTAAGCTCTGGTCTATGCAGCTGCCAGTTCTTGTAGCTGAGATTGCTTTTGCTGTGTTTTTGATAGCTATTGTGTCAATAACTGCGATCTTTTACGTTCGATACAAGCTACGGAATTGCCATTGCTCAGGAAAGGAGTTGAAGTCGAAGAAGAACAAAGTGACAGCCTCTGCCTTCCAGAAGGAAAGCTATAAAATACGTCCCGACTTAGATGAGCTTAAGATAAGGCGGGCTCAGATGTTCACCTATGAAGAACTCGAGAGAGCAACGTGTGGGTTTAAGGAAGAGTCTATCGTAGGAAAGGGGAGTTTCTCTTGTGTTTTTCGAGGTGTTTTGAAGGACGGGACAGTCGTAGCAGTCAAACGAGCTATAATGTCTCCTAATATGCAGAAGAATTCAAAAGAGTTCCACACTGAACTTGACTTGTTATCAAGATTAAACCATGCCCATTTGCTTAATTTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTGGTTTATGAGTTCATGGCTCATGGCTCCTTGTACCAGCACCTCCATGGCAAGAACGAGACCTTAAAAGAGCAATTAGATTGGATAAGAAGAGTTACAATTGCAGTTCAAGCAGCCAGGGGAATCGAATACTTGCATGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATTAAGTCGTCAAACATTCTCATCGACGAAGAGCACAATGCTCGAGTCGCTGATTTTGGCTTGTCATTGTTGGGACCAACAGATAGTAGCTCTCCATTAGCCGAGCTACCAGCTGGGACACTTGGCTATCTCGATCCCGAATACTATAGACTTCATTACCTTACCACAAAGTCCGATGTGTATAGCTTCGGTGTTTTGCTACTAGAAATTCTCAGTGGTCGAAAAGCCATTGATATGCAATATGAAGAAGGTAACATAGTAGAATGGGCAGTGCCTTTGATAAGATCTGGAGATATATCTGCAATTTTAGATCCGATATTAAAACCGCCCTCCGATATCGAAGCCTTGAAGAGGATTGCAAATGTAGCTTGCAAATGTGTGAGAATGAGAGCTAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTAGAGCGTGCTCTTGCCCAACTGATGGGAAGTCCGTGTAACGAACAACCGATCTTACCAACTGAGGTGGTTTTGGGAAGCAGCAGACTACACAAAAAGTCATCTCAAAGATCATCGAACCGTTCAGTGTCTGAAACGGATATAGCAGAAGCTGAGGATCAAAGGTTCGAGTTTAGAGCTCCATCGTGGATTACCTTCCCGAGCGTGACGTCGTCCCAGAGGAGGAAATCCTCAGTGTCAGAAGCAGATGTTGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAATTGTGGAGGTGTTGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAGGAAAAGCTGTTTTTGGAGCACAATTTCTAA 2715 44.24 MFGWRGGLFVELVVFADMCFLVSGLGSMSPVAVSYGEKGPVFCGLKSDGSSLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMSKGAQYQEISAGDYHLCGLRMPLTGRRRNMSFVDCWGYNMTRTFEFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQKIASGGYHVCGILEGMRSRAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLASVVGGKFHACGIKSSDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCSPGFYEISQDKARCKSPSFHVCMPCSTACPPGMYQKFECSLKSDRQCEYNCSSCFSGECISNCSSMISNGLLVKKNGKLWSMQLPVLVAEIAFAVFLIAIVSITAIFYVRYKLRNCHCSGKELKSKKNKVTASAFQKESYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNETLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIRSGDISAILDPILKPPSDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNCGGVGDGLKSLEEEIGPASPQEKLFLEHNF 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11222094 11224808 - CmaCh14G014750.1 Cma14g01475 308458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01475 904 Pfam Protein tyrosine and serine/threonine kinase 509 778 IPR001245 GO:0004672|GO:0006468
Cma14g01475 904 MobiDBLite consensus disorder prediction 847 880 - -
Cma14g01475 904 CDD STKc_IRAK 512 781 - -
Cma14g01475 904 SUPERFAMILY Protein kinase-like (PK-like) 488 779 IPR011009 -
Cma14g01475 904 PANTHER RECEPTOR-LIKE KINASE 8 904 - -
Cma14g01475 904 MobiDBLite consensus disorder prediction 807 823 - -
Cma14g01475 904 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 904 - -
Cma14g01475 904 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Cma14g01475 904 MobiDBLite consensus disorder prediction 807 826 - -
Cma14g01475 904 SMART serkin_6 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01475 904 Gene3D - 20 234 IPR009091 -
Cma14g01475 904 SUPERFAMILY RCC1/BLIP-II 25 277 IPR009091 -
Cma14g01475 904 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01475 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Cma14g01475 904 Gene3D Transferase(Phosphotransferase) domain 1 584 791 - -
Cma14g01475 904 Gene3D - 235 325 IPR009091 -
Cma14g01475 904 Gene3D Phosphorylase Kinase; domain 1 478 583 - -
Cma14g01475 904 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 336 384 IPR001368 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01648 Cma14g01475 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00244 Cma-Chr1:1124298 Cma14g01475 Cma-Chr14:11222094 4.59E-75 dispersed
Cma03g01243 Cma-Chr3:8219198 Cma14g01475 Cma-Chr14:11222094 1.60E-100 dispersed
Cma04g00154 Cma-Chr4:764144 Cma14g01475 Cma-Chr14:11222094 3.14E-15 dispersed
Cma07g00930 Cma-Chr7:4466956 Cma14g01475 Cma-Chr14:11222094 9.69E-106 dispersed
Cma13g00062 Cma-Chr13:520644 Cma14g01475 Cma-Chr14:11222094 1.99E-89 dispersed
Cma14g00981 Cma-Chr14:5140778 Cma14g01475 Cma-Chr14:11222094 6.03E-73 dispersed
Cma03g01292 Cma-Chr3:8394317 Cma14g01475 Cma-Chr14:11222094 2.49E-46 transposed
Cma14g01475 Cma-Chr14:11222094 Cma06g01648 Cma-Chr6:10224990 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69091 PF07714 PK_Tyr_Ser-Thr 1.60E-43 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01475 - - csv:101210393 1762.66