Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g01480 | ATGGCTATTACGATGGCTAGGTCTTTTCTGCAGGTTGCTGCTACGGAAGAGGTTGCTACCCCTCTCCGAGTGGTTCAGATTGAAGGATTGGGAATTTCCTCCTTTCCTTTTTCTTATTTTGTGTCTGATTTGATTTTGAAGTTGAACCTTCCAATTTGGATTCAGAATTGCTGTTATATCGGTTCTGCCTCGTTCCTGTCCACACTGTCTTCTTTGCGAAGGAAGAAAATTTTTTATAGTTCTCTTTGGCACGTTATATTGAAGATAATCAAGCATTGCAAAGAGTTTTCACCAGCCCTTGTGACTGGGCAGCTTCTTGGATTAGATGTTGGTAGTGTTCTTGAAGTCACTAATTGCTTTCCCTTTCCGACACGGGAGGAGGATGAGGAGATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAACACTGTCGGATGGTATCAGTCGACCTTCTTAGGTTCATATCAGACAGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAATATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGTAACAACTTTACAGGAGAGAAGTTGAGAGAGAAGAACTTATCATGGGTGGATATTTTTGAAGAAATACCTGTATGTCACTTGGACCCCCCATATCCTTGTCCGGATCTTACTCTGATAATTGGTCAAAAATCAAAGTTTCATAGTGATTTTATGACGGAGCTTGAAGCTGACTCGCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTCCAGCGAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCGGTCGAGCAGCAGAAGTTCCAATTCTATTATCGAAGCCTGACACGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGGAGGGCAGAGAATGCGATGAGGAAAGCAGCAGGAGAAGAACCTCTCCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAATTACTGCAATCAAATTAATGGGGTTGGTGGACAGAGTTTCAACAAGCTTCATTTGATGAAGGCTTTGCACGACAGTTAA | 1221 | 42.42 | MAITMARSFLQVAATEEVATPLRVVQIEGLGISSFPFSYFVSDLILKLNLPIWIQNCCYIGSASFLSTLSSLRRKKIFYSSLWHVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPVCHLDPPYPCPDLTLIIGQKSKFHSDFMTELEADSPVTQCDYDRLQLPANPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENAMRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGVGGQSFNKLHLMKALHDS | 406 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 11250182 | 11254694 | + | CmaCh14G014800.1 | Cma14g01480 | 308463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g01480 | 406 | MobiDBLite | consensus disorder prediction | 338 | 363 | - | - | |
Cma14g01480 | 406 | Pfam | C-terminal region of eIF3h | 197 | 404 | IPR045810 | - | |
Cma14g01480 | 406 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 85 | 180 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Cma14g01480 | 406 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 86 | 405 | - | - | |
Cma14g01480 | 406 | Gene3D | Cytidine Deaminase, domain 2 | 79 | 247 | - | - | |
Cma14g01480 | 406 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 3 | 32 | - | - | |
Cma14g01480 | 406 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H | 86 | 405 | - | - | |
Cma14g01480 | 406 | SMART | pad1_6 | 76 | 211 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Cma14g01480 | 406 | ProSiteProfiles | MPN domain profile. | 79 | 212 | IPR037518 | - | |
Cma14g01480 | 406 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H | 3 | 32 | - | - | |
Cma14g01480 | 406 | Hamap | Eukaryotic translation initiation factor 3 subunit H [EIF3H]. | 75 | 406 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 | |
Cma14g01480 | 406 | CDD | MPN_eIF3h | 85 | 355 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g01480 | Cma-Chr14:11250182 | Cma06g01642 | Cma-Chr6:10206666 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g01480 | K03247 | - | csv:101211860 | 571.622 |