Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01481 ATGGATTTCCTCCGTTTTTTGGCCCTTTCCCTGTTGGGATCCATCGCCATTCTTCTTCACAACTGCATTGCTCTTGATGCCGTTTCCCCTCAACTCAACGACGATATTCTCGGCTTGATTGTCTTCAAATCTGCCCTCCACGACCCCTCTTCCCTTCTCGCCTCCTGGAATGAAGACGATGATTCTCCTTGTTCCTGGGAGTTCGTTAAATGCAACCCCATCAATGGCAGAGTTTCCGAGCTTTCCATCGATGGATTCGGGCTATCAGGGAGAATCGGACGAGGGTTTGAGAAATTGCAGCATCTCAAGGTACTCTCGCTTTCTGGCAATAATTTCACTGGCAATCTTAGTCCTGAGCTTGTTCTTCCTCCCAGTCTTCAGAGAGTTACTTTCAGTCGTAATCGTTTATCTGGGCGGATACCCACTTCTTTAATCTCTATGTCCTCCATTAGATTTCTTGATTTTTCTGATAACCTGTTCTCTGGGCCGATTCCTGATGAAATGTTTGCTAACTGTTCTTCGCTTCATTATCTTTCTCTTGCGTCTAATATGCTTCAAGGCCCTGTCCCCAACACATTGCACACAAGGTGTTTGTATTTAAACACTCTGAATCTTTCGGCCAATCAGTTCTCTGGTAGCTTGGATTTATGGTCTTTGACAAGGCTCAGGACATTGGATCTTTCCAAAAATGCTTTCTCTGGGTATTTACCGCAAGGGATTTCAGCCATCCATAGCTTGAAAGAGCTCAAGTTACAGAGCAATCAGTTCTCAGGGCCATTGCCTACAGACTTGGGACTATGTCTCCACTTATCTACATTGGATGTTAGCAGGAACCGCCTCACCGGGCCATTACCGGAGTCGATGAGGCTCTTAACCTCCTTGACCTTCTTGAACATTGGGTTCAACACGTTTTCAGGGGAGCTCCCGCAGTGGATTGGGAACATGACAAGCTTGAACTACGTGGAATTCTCAAGCAATGGCTTCACTGGCAGCCTTCCCTTGGCAATGGGGGGATTGAGATCTGTCAAATACATGAGTTTTTCAAACAACAAGCTGTCTGGGAACATCCCAGAGACATTGATGAAGTGTTCTGAGCTATCTGTGCTCAAGCTAGAAGGAAACAGCTTGAATGGAAGGGTGCCAGAGGGGCTGTTTGAACTGGGTTTGGAGGAGATCAATTTGTCTCAGAACGAGCTGATTGGTTCAGTCCCAGTAGGATCAAGCAAGCTGTATGAAAAGCTCACAAGGATGGACCTGTCAAGGAACAGATTAGAAGGCAACTTCCCAGCAGAAATGGGATTGTACAAAAATTTGAAGTACTTGAATCTCTCATGGAACAACTTTAAAGCAAAGATTCCACCGGAAATGGGTTTGTTTCAGAACTTGAATGTGTTGGACCTCAGAAGCAGTGATCTGCATGGCTCAATCCCCGGAGAACTGTGTGATTCTGGCAGTCTGGGGATTCTTCAGCTCGATGGCAACTCTTTGATTGGTCCAATTCCCGACGAGATTGGAAATTGTGTCTCACTATACTTGCTGAGTTTATCCCACAACAATCTAAGCGGAGAAATTCCAAAGTCAATCTCGAAGCTAAGCAAGCTAGAGATTCTAAGGCTCGAATCAAATGAATTGAGTGGAGAAATACCCCAAGAGCTTGGAATTCTTCAAAACCTGCTTGCTGTTAACATTTCATACAATATGCTGACAGGTAGGCTTCCTGTTGGGGGCATCTTTCCAAGCTTGGATCAAAGTGCTCTGCAAGGGAACTTGGGCCTTTGCTCCCCTTTGCTTAAAGGACCTTGCAAAATGAATGTCCCTAAGCCCCTTGTTCTTGACCCCAATGCCTATCCCAGCCAAATGGGTGGCCAAACCAGCAGGGACAAGCCCTCACAATACTCTAATTCTTCTCCCCATCATGTGTTCTTCAGTGTCTCTGCCATTGTTGCCATTTCTGCTGCCACTTTCATTGCCCTTGGGGTGCTTGTGGTTACCTTGCTCAATGTCTCGGCTCGGAGGAGATCGCTTGCGTTTGTCGACAATGCGTTGGAAAGCATGTGCTCGAGCTCTTCGAAATCAGGGACTGCGACTGCTGGTAAGCTTGTTTTGTTTGATTCGAACTCGAGGGGTTCACCGAACTGGGTTAGTAACCATGAAGCCTTGCTGAACAAGGCCTCTGAGATTGGTGCTGGAGTTTTTGGAACGGTTTATAAGGTTTCGTTGGGAGATCAAGGTGGAAGAGACGTAGCTATCAAGAAGCTTGTGAAGTCGAACATGATTCAGAATGTGGAAGATTTTGACCGGGAAATCCAAATCTTGGGCAAGGTCAAGCACCCCAATTTGATCAGCTTAAAGGGTTACTACTGGACTGCACAAACTCAGCTCTTGGTAATGGAGTATGCTACCAATGGAAGTCTTCAAACTCAACTCCATGGAAGGCTTCCTTCATCTCCACCACTCTCTTGGGATAACCGGTTCAAGATTGTGCTTGGGACAGCCAAAGGACTAGCACATTTACACCACTCATTCCGTCCGCCAATCGTTCACTACGATCTCAAGCCAACCAACATCCTTCTCGACGAAAACTTCAACCCGAAGATCTCCGATTACGGGCTTGCAAGACTGCTAACAAAGCTTGACAAGCACATCGTAAACAACAGATTCCAAAGTGCTTTGGGGTACATTGCACCAGAACTGGCATGCCAGAGCATAAGGGTGAACGAGAAATGCGACGTACACGGGTTCGGGGTGATGGTTCTCGAGATCGTAACAGGACGAAGGCCAGTCGAGTACGGAGAAGACAATGTGGTAATATTGACAGACCATGTGAGGTATTTGCTAGAGAGAGGGAATGTGTTGGATTGTGTTGATCCAAGCATGAGTGAGTATTCAGAAGATGAAGTGGTGCCCATACTCAAGCTGGCTTTGGTCTGCATTTCTCAAATTCCTTCAAGCAGGCCATCCATGGCTGAAGTGGTGCAGATTCTGCAAGTCATCAAGGCTCCACTCCCACAAACAATACCACAAGGATTTTGA 3033 46.49 MDFLRFLALSLLGSIAILLHNCIALDAVSPQLNDDILGLIVFKSALHDPSSLLASWNEDDDSPCSWEFVKCNPINGRVSELSIDGFGLSGRIGRGFEKLQHLKVLSLSGNNFTGNLSPELVLPPSLQRVTFSRNRLSGRIPTSLISMSSIRFLDFSDNLFSGPIPDEMFANCSSLHYLSLASNMLQGPVPNTLHTRCLYLNTLNLSANQFSGSLDLWSLTRLRTLDLSKNAFSGYLPQGISAIHSLKELKLQSNQFSGPLPTDLGLCLHLSTLDVSRNRLTGPLPESMRLLTSLTFLNIGFNTFSGELPQWIGNMTSLNYVEFSSNGFTGSLPLAMGGLRSVKYMSFSNNKLSGNIPETLMKCSELSVLKLEGNSLNGRVPEGLFELGLEEINLSQNELIGSVPVGSSKLYEKLTRMDLSRNRLEGNFPAEMGLYKNLKYLNLSWNNFKAKIPPEMGLFQNLNVLDLRSSDLHGSIPGELCDSGSLGILQLDGNSLIGPIPDEIGNCVSLYLLSLSHNNLSGEIPKSISKLSKLEILRLESNELSGEIPQELGILQNLLAVNISYNMLTGRLPVGGIFPSLDQSALQGNLGLCSPLLKGPCKMNVPKPLVLDPNAYPSQMGGQTSRDKPSQYSNSSPHHVFFSVSAIVAISAATFIALGVLVVTLLNVSARRRSLAFVDNALESMCSSSSKSGTATAGKLVLFDSNSRGSPNWVSNHEALLNKASEIGAGVFGTVYKVSLGDQGGRDVAIKKLVKSNMIQNVEDFDREIQILGKVKHPNLISLKGYYWTAQTQLLVMEYATNGSLQTQLHGRLPSSPPLSWDNRFKIVLGTAKGLAHLHHSFRPPIVHYDLKPTNILLDENFNPKISDYGLARLLTKLDKHIVNNRFQSALGYIAPELACQSIRVNEKCDVHGFGVMVLEIVTGRRPVEYGEDNVVILTDHVRYLLERGNVLDCVDPSMSEYSEDEVVPILKLALVCISQIPSSRPSMAEVVQILQVIKAPLPQTIPQGF 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11254750 11258518 - CmaCh14G014810.1 Cma14g01481 308464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01481 1010 Gene3D Ribonuclease Inhibitor 388 600 IPR032675 -
Cma14g01481 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Cma14g01481 1010 Gene3D Ribonuclease Inhibitor 287 387 IPR032675 -
Cma14g01481 1010 SMART LRR_typ_2 243 267 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 291 315 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 219 242 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 435 459 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 531 555 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 363 387 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 147 171 IPR003591 -
Cma14g01481 1010 SMART LRR_typ_2 99 123 IPR003591 -
Cma14g01481 1010 Pfam Leucine Rich repeat 99 114 IPR001611 GO:0005515
Cma14g01481 1010 Gene3D Transferase(Phosphotransferase) domain 1 801 1004 - -
Cma14g01481 1010 Pfam Protein kinase domain 723 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01481 1010 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 1005 - -
Cma14g01481 1010 SUPERFAMILY L domain-like 308 583 - -
Cma14g01481 1010 ProSitePatterns Protein kinases ATP-binding region signature. 727 752 IPR017441 GO:0005524
Cma14g01481 1010 SUPERFAMILY L domain-like 50 399 - -
Cma14g01481 1010 PANTHER BNAA09G02190D PROTEIN 6 1005 - -
Cma14g01481 1010 SMART serkin_6 721 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01481 1010 Gene3D Phosphorylase Kinase; domain 1 710 799 - -
Cma14g01481 1010 Gene3D Ribonuclease Inhibitor 33 195 IPR032675 -
Cma14g01481 1010 Gene3D Ribonuclease Inhibitor 196 286 IPR032675 -
Cma14g01481 1010 ProSiteProfiles Protein kinase domain profile. 721 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01481 1010 SUPERFAMILY Protein kinase-like (PK-like) 724 999 IPR011009 -
Cma14g01481 1010 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Cma14g01481 1010 CDD STKc_IRAK 727 996 - -
Cma14g01481 1010 Pfam Leucine Rich Repeat 437 454 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00102 Cma-Chr4:508360 Cma14g01481 Cma-Chr14:11254750 0 dispersed
Cma04g01061 Cma-Chr4:5479046 Cma14g01481 Cma-Chr14:11254750 0 dispersed
Cma06g00186 Cma-Chr6:954289 Cma14g01481 Cma-Chr14:11254750 0 dispersed
Cma06g00738 Cma-Chr6:3728629 Cma14g01481 Cma-Chr14:11254750 2.72E-160 dispersed
Cma14g01481 Cma-Chr14:11254750 Cma15g00170 Cma-Chr15:777070 0 dispersed
Cma14g01481 Cma-Chr14:11254750 Cma06g01641 Cma-Chr6:10203861 7.57E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69092 PF00069 Pkinase 7.50E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01481 - - csv:101217545 1756.11