Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01512 ATGTCCAGTTCCAGTCATTCTCCGTCCGCCTTCGACAGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGAACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATTGGAAGGAATGATTTGAAGAATCTGGATCCATTTCTCATGCTCGATGATTTCTCTGTCAGTCCACCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTATATGTTACAAGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACGATTAGAACAGGGGATGTCCAGTGGATGACAGCGGGACGAGGTATAGTCCATTCTGAAATGCCTGCTGGTGCAGGTTCTCAAAAGGGCTTGCAGCTTTGGATCAATCTTGCATCCCGTGACAAAATGATGAAGCCAAGGTATCAGGAGATCCCAAGCGACAACATTCCGAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGCGAGTCCATGGGAGTCCGTTCTCCAATCTACACTCAAACGCCAACTATGTACCTCGACTTCATTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATCCCGGACACGTGGACCTCTTTTGTGTACATAATCGACGGTGAAGGAGTGTTCGGGTCCCCAAGTTCATCCCCGGTGGCTGCTCACCATGTCCTAGTATTGGGAGGTGGAAATGGGGTAAGTGTGTGGAACAAATCTTCAAAGCCATTGAGGTTTGTTCTGATTGCAGGGAAGCCTCTGAATGAACCAATTGTTCAATATGGACCGTTTGTGATGAACTCGCAATCTGAAATTGCACAAGCATTTGAGGACTACCGCTATGCCAAAAATGGCTTTGAAATGGCGAAGTATTGGAGATCTCAGTGA 888 48.65 MSSSSHSPSAFDRPRSVIKKILAKLQNEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIVHSEMPAGAGSQKGLQLWINLASRDKMMKPRYQEIPSDNIPRAEKDGVEVRVIAGESMGVRSPIYTQTPTMYLDFILKPRAQVHQSIPDTWTSFVYIIDGEGVFGSPSSSPVAAHHVLVLGGGNGVSVWNKSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIAQAFEDYRYAKNGFEMAKYWRSQ 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11428180 11430254 + CmaCh14G015120.1 Cma14g01512 308495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01512 295 CDD cupin_pirin_C 177 253 - -
Cma14g01512 295 Gene3D Jelly Rolls 28 280 IPR014710 -
Cma14g01512 295 PANTHER PIRIN-LIKE PROTEIN 5 295 - -
Cma14g01512 295 SUPERFAMILY RmlC-like cupins 15 293 IPR011051 -
Cma14g01512 295 CDD cupin_pirin_N 32 129 - -
Cma14g01512 295 PANTHER PIRIN-RELATED 5 295 IPR012093 -
Cma14g01512 295 PIRSF Pirin 13 293 IPR012093 -
Cma14g01512 295 Pfam Pirin C-terminal cupin domain 180 285 IPR008778 -
Cma14g01512 295 Pfam Pirin 35 127 IPR003829 -
Cma14g01512 295 Gene3D Jelly Rolls 149 254 IPR014710 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01623 Cma14g01512 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01512 Cma-Chr14:11428180 Cma16g00937 Cma-Chr16:7193013 9.68E-138 dispersed
Cma14g01512 Cma-Chr14:11428180 Cma06g01623 Cma-Chr6:10098128 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01512 K06911 - csv:101205861 550.051