Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma14g01527 | ATGAGAAATTTTTGTTTTCCTGCTCGAATCGCATACCCTTTTCGTCTATTTCTCACCCTCGTTGATTTCTTACTCATTTTTCCCGCCATGGAGGACGATTTTGAGTTTCCATCTGCAAGCAATGTGGACGAGGAAATGGACATGCCTGAGGATGAAGCGGAGAGCCCGGTTCTGAAGGTTGGCGAGGAGAAGGAGATTGGGAAGAATGGGCTGAAGAAGAAACTTGTTAAAGAAGGTGAAGGATGGGAAACTCCCGACACTGGTGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGGACTAAATTTGATTCCAGCCGTGACCGAGGAACGCCTTTCAAATTCAAGCTCGGGGAAGGGCAAGTGATTAAAGGATGGGATGAAGGTATCAGAACTATGAAGAAGGGTGAAAATGCAGTATTCACGATACCCCCTGGATTAGCCTATGGAGAGTCCGGTTCTCCTCCAACCATTCCACCGAATGCTACTCTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCCTCAAAAAGATTCTCGTCAAAGGAGATGGGTGGGATAAACCGAAGGATCTAGACGAAGTCATGGTTCATTACGAGGCTCGCCGTGAAGATGGTACGCTAATCTCGAAGTGTAATGGGGTTGAATTCATCGTTGAAAATGGCTACTTCTGCCCTGCTTTGGCAACAGCTGTGAAAACGATGAAGAAGGGAGAGAAGGCGTTGTTAACCGTGAGGCCTCAATATGGGTTTGGGGAGTCCGGTAGGCCTGCGGTGGGAGAAGAAGGTGTTGTGCCTCCTAATGCCACACTTCAGATAACCCTTGAATTGGTTTCTTGGAAAACTGTTATAGACATCACTAAAGATAAGAAAGTCCTGAAGAAGACTTTAAAGGAGGGAGAAGGATATGAACAACCAAATGATGGAGCAGAGGTGCAAGTGAAACTCATCGGTAAACTAGCTGATGGGACGATCTTTGCCAAGAAGGGCAATGACGAGAAGCCTTTTGAGTTCAAAACTGATGAAGAACAAGTCATTGAAGGACTCGATTTGGCTGTGAAAAAAATGAAGAAGGGAGAAGTTGCCATGGTGACTATCCATCCCAAGTATGCTTTTGGGTCTTCCGATTCATCTCAAGATCTTGCTGTGGTTCCTGCAAACTCAACTGTTCATTACGAAGTTGAGCTTGTCTCATTTGTCAAAGAAAAAGAATCTTTCGATCTGAAAACAGCGGAAGAGAAAATAGAAGCAGCAGGGAGAAAGAAGGAAGAGGGAAACGTATTGTTCAAAGCTGGTAAGTATGCCAGAGCATCAAGCAGATATGAAAAGGCTGTGCGTTACATTGAATATGATACCTCCTTCAACGATGAGGAGAAGCAACAGTGCAAGGCACTAAAGATTTTGTGCAATCTAAACAATGCTGCTTGCAAATTGAAAGTCAAGGACCACAGGCAAGCAGAAAAGCTCTGTTCAAAGGTGTTGGAACTTGACAGTAGAAATGTGAAAGCTCTATATAGAAGGGCTCAAGCATATATTCAACTCGTTGATCTTGATCTTGCTGAGCAGGACCTCAAGAAAGCCCTTGAGATTGACCCTGAAAACAGACAAGTGAAGATTGAATATCGACATTTGAAGGAGAAAGTAAGGGAATACAACAAGAGAGATGCACAATTTTATGGCAACATCTTTGCAAAAATGAGCAAGTTGGAGTCAGGGAAGGCTGCCAGTTCAGCGGTGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAG | 1815 | 44.24 | MRNFCFPARIAYPFRLFLTLVDFLLIFPAMEDDFEFPSASNVDEEMDMPEDEAESPVLKVGEEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMKKGENAVFTIPPGLAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDLDEVMVHYEARREDGTLISKCNGVEFIVENGYFCPALATAVKTMKKGEKALLTVRPQYGFGESGRPAVGEEGVVPPNATLQITLELVSWKTVIDITKDKKVLKKTLKEGEGYEQPNDGAEVQVKLIGKLADGTIFAKKGNDEKPFEFKTDEEQVIEGLDLAVKKMKKGEVAMVTIHPKYAFGSSDSSQDLAVVPANSTVHYEVELVSFVKEKESFDLKTAEEKIEAAGRKKEEGNVLFKAGKYARASSRYEKAVRYIEYDTSFNDEEKQQCKALKILCNLNNAACKLKVKDHRQAEKLCSKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDLKKALEIDPENRQVKIEYRHLKEKVREYNKRDAQFYGNIFAKMSKLESGKAASSAVKQEAVPMTIDSKA | 604 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 11556106 | 11559170 | - | CmaCh14G015270.1 | Cma14g01527 | 308510 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma14g01527 | 604 | SUPERFAMILY | FKBP-like | 180 | 294 | - | - | |
| Cma14g01527 | 604 | Gene3D | - | 60 | 179 | IPR046357 | GO:0003755 | |
| Cma14g01527 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 88 | 176 | IPR001179 | GO:0003755 | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 411 | 589 | - | - | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 43 | 300 | - | - | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 305 | 412 | - | - | |
| Cma14g01527 | 604 | SUPERFAMILY | FKBP-like | 298 | 424 | - | - | |
| Cma14g01527 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 315 | 409 | IPR001179 | GO:0003755 | |
| Cma14g01527 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 83 | 173 | IPR001179 | GO:0003755 | |
| Cma14g01527 | 604 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 200 | 290 | IPR001179 | GO:0003755 | |
| Cma14g01527 | 604 | Pfam | Tetratricopeptide repeat | 513 | 546 | IPR001440 | GO:0005515 | |
| Cma14g01527 | 604 | ProSiteProfiles | TPR repeat profile. | 513 | 546 | IPR019734 | GO:0005515 | |
| Cma14g01527 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 321 | 412 | IPR001179 | GO:0003755 | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 411 | 589 | - | - | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 43 | 300 | - | - | |
| Cma14g01527 | 604 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 305 | 412 | - | - | |
| Cma14g01527 | 604 | Gene3D | - | 180 | 293 | IPR046357 | GO:0003755 | |
| Cma14g01527 | 604 | Coils | Coil | 546 | 566 | - | - | |
| Cma14g01527 | 604 | SMART | tpr_5 | 479 | 512 | IPR019734 | GO:0005515 | |
| Cma14g01527 | 604 | SMART | tpr_5 | 430 | 463 | IPR019734 | GO:0005515 | |
| Cma14g01527 | 604 | SMART | tpr_5 | 513 | 546 | IPR019734 | GO:0005515 | |
| Cma14g01527 | 604 | Gene3D | - | 294 | 418 | IPR046357 | GO:0003755 | |
| Cma14g01527 | 604 | Gene3D | Tetratricopeptide repeat domain | 419 | 573 | IPR011990 | GO:0005515 | |
| Cma14g01527 | 604 | SUPERFAMILY | TPR-like | 424 | 578 | IPR011990 | GO:0005515 | |
| Cma14g01527 | 604 | SUPERFAMILY | FKBP-like | 57 | 184 | - | - | |
| Cma14g01527 | 604 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 204 | 293 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma07g01025 | Cma-Chr7:5343053 | Cma14g01527 | Cma-Chr14:11556106 | 8.33E-73 | dispersed | |
| Cma08g00246 | Cma-Chr8:1389187 | Cma14g01527 | Cma-Chr14:11556106 | 0 | dispersed | |
| Cma13g00433 | Cma-Chr13:4880711 | Cma14g01527 | Cma-Chr14:11556106 | 2.00E-11 | dispersed | |
| Cma14g01527 | Cma-Chr14:11556106 | Cma17g01293 | Cma-Chr17:8722251 | 3.35E-06 | dispersed | |
| Cma14g01527 | Cma-Chr14:11556106 | Cma17g01292 | Cma-Chr17:8717436 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma14g01527 | K09571 | - | csv:101210041 | 989.949 |