Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01555 ATGAGAGTTGGGAACTATGAGTTGGGGAAGACTCTTGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGATATCCGTACCGGTCGCCGTTACGCTGTCAAGATCCTCGACAAGACTAGGATTCTCCGTCTCAACTTCTCCGACCAGATTAAGCGTGAAATAAGTACTCTGAAGCTCCTCAGGCATCCGAATGTTGTAAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAATCCAAAGGTAAGATGGATGAAGCGGAAGGTCGAAGGCTCTTCCAGCAGCTTATTGATGGTCTCAGCTACTGCCATGAAAAAGGAGTTTACCACAGGGATCTCAAGCTGGAAAACGTGCTTGTTGATGACAAGGGAAATATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCGCAGAATTGCAGGGAAGACGGTTTGCTGCACACCACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTTCTTGCTAACAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATTTTGTATGTCATTCTTACGGCCTGTCTTCCTTTCGACGAGACCAATCTATCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCGGCAGGTGCCAGAAAGTTGATAGGGAGAACTCTTGACCCCAATCCCAACACACGCATTACAATAGCAGGAATTAAAGAGAATGAGTGGTTCAAGACCGACTATAATCCTGCTTCTCCTTGTTATGACGATGAGGAGGAGGGTCCACTTGATGATCAGGATGATGCCATCTCAACGCCTGATGAGCCATCCGACGTCGAAAACAGCCCAAAATCTCCATCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGATCTGTCTGGTTTCTTTGAGCAAGAGGATGTTTCCGAGAGGAAGATCAGATTTACATCCAACCATTCGGCCAAGGACTTGCTTGAGAGAATTGAAATTATCGCAACAGATATGGGATTTCGAGTCCAAAAGAAAAGTGGAAAGTTGAAAGTGATGCAAGAGGTAAGATGCCAAAGAAGCCTAAGTAATCTATCATTTGTGGCAGAGGTCTTTGAGATAAGCCCGTTGCTTCATGTAGTTGAACTGAAAAAATCTTTTGGAGATTCATCAGCTTACAGACAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCAGAGCTCGAACGGCATAATTCAAGCTCCTTAGCAGTAAACAGTACATGTTAG 1326 44.12 MRVGNYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTRILRLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIESKGKMDEAEGRRLFQQLIDGLSYCHEKGVYHRDLKLENVLVDDKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLSLLYKKTLRGDFQIPKWLSAGARKLIGRTLDPNPNTRITIAGIKENEWFKTDYNPASPCYDDEEEGPLDDQDDAISTPDEPSDVENSPKSPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEVRCQRSLSNLSFVAEVFEISPLLHVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSSSLAVNSTC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11700857 11704156 - CmaCh14G015550.1 Cma14g01555 308538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01555 441 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Cma14g01555 441 Gene3D Kinase associated domain 1, KA1 306 423 - -
Cma14g01555 441 CDD CIPK_C 307 418 - -
Cma14g01555 441 Pfam NAF domain 303 362 IPR004041 GO:0007165
Cma14g01555 441 MobiDBLite consensus disorder prediction 270 291 - -
Cma14g01555 441 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Cma14g01555 441 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01555 441 MobiDBLite consensus disorder prediction 266 301 - -
Cma14g01555 441 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01555 441 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Cma14g01555 441 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Cma14g01555 441 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01555 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Cma14g01555 441 PANTHER - 1 427 - -
Cma14g01555 441 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 427 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01555 Cma-Chr14:11700857 Cma14g02137 Cma-Chr14:14655135 2.31E-153 dispersed
Cma14g01555 Cma-Chr14:11700857 Cma17g00399 Cma-Chr17:2265968 2.47E-41 wgd
Cma14g01555 Cma-Chr14:11700857 Cma06g01592 Cma-Chr6:9929518 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69094 PF00069 Pkinase 2.80E-71 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01555 K07198 - csv:101205987 816.224