Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01583 ATGGCGTCGTCAATGATTCTAAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAGAAAGTGGCGAGGGAAAATGATCGTCAAGGTCAGGATCACATCCAGTGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTTCCGAGTCGGCACCAAACGAGACTCCGCGCCGCGGCCGAGCTGTGCGGGAGGCGTCTGATACAGTTCTGGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTCAAGCTCAAGTTTCGAAAGCACAACCGGCAGAAGGCTCATGCGACTGGAAACAGCAGAACGAAGAAGCCGAGAGTTAGCGTTTTCCGGTTGAGAGGGAAGGGATTACCAACTTTACAGAGTAAAGCTCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCAGAAAGCAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATACCCGCTCTGGAAATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCTTCTTCTTCTGGTATGGATTCTTCCATCTCCCCACCTTCTACCTGA 642 51.87 MASSMILNPVASSERSRDSSRKKKKKKKVARENDRQGQDHIQWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSSSGMDSSISPPST 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11891942 11892583 - CmaCh14G015830.1 Cma14g01583 308566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01583 213 MobiDBLite consensus disorder prediction 65 86 - -
Cma14g01583 213 MobiDBLite consensus disorder prediction 1 48 - -
Cma14g01583 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 210 IPR044660 GO:0006355
Cma14g01583 213 CDD bHLH_AtIBH1_like 138 191 IPR044549 GO:0006355
Cma14g01583 213 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01583 Cma-Chr14:11891942 Cma17g00376 Cma-Chr17:2094890 1.34E-84 wgd
Cma14g01583 Cma-Chr14:11891942 Cma06g01569 Cma-Chr6:9819218 1.56E-104 wgd
Cma14g01583 Cma-Chr14:11891942 Cma08g01285 Cma-Chr8:7781060 5.15E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01583 - - cpep:111791819 343.969