Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01601 ATGGCCGTCGCCGTCGCCGATCTGATCTTCTTAATCATCTTTACGACCATACCCTTTTCGATTTCTCAGCCAACTGAGAAAGCTCCGCCTCCCGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAGCCAAGCTTCCCCCAAATCTCACTGTTATGGCACGCCAGCCTTACCGATTCGAGTCCACTCTCTCGATTCTCAACAACGGTCTTCAGGAGCTCAAGTCTTGGAAGGTTTTTGTAGGGTTTCAACACGATGAGTTCTTGGTTTCGGCCTCCGGCGCCGTCCTCGCCGATGGTAATTCTATCCCTGGTAACGTTGGTAATGGGACCGTCTTTGCTGGTTTTCCGATGAGTAACTTGAAGACGGCCATTGAAACTGCTGGGGATTTCACTCAGATGCAGGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGTTGCCCCTCCGAATAATCCGATGCCTTCCAATATATCTCTTGCCAATGATGGATATCTCTGCACCAAGCCAATTCTACAAGGAAAGAGTGAAATGCACGTCTGTTGCTCACCCGATCCACGCGTTAAAACAAACATCACAACCAGTGAAGTGTTCTTAGCTCGTCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGAACATATGATTCAAGTTACTGGGCACAAGTCACAATTTCTAACCACAATCCTCTTGGTCGTCTTGATTATTGGAAATTGAGCTGGGATTGGATGAGGGATGAGTTTATCTATTCAATGAAAGGTGCTTATCCTTCTGTTGTTGATTCTACTGAATGCATTTTTGGTAGACAAGGCACTTACTATAGGGATTTAGACTTTTTCAATGTATTAAGTTGTAAAAGAAGGCCTACCATTGTTGATTTACCTCCAACTAAGGCTAACGACACCACTCTCGGGTTGATCCCGTTCTGCTGTCGAAATGGGACGCTCTTGCCATCGCATATGGACCCGAGCAAGTCGATTTCTGCATTTCAGATGCAAGTGCTTAAAATGCCACCAGATCTTAATAGATCTCAGATTACACCACCTCAAAATTGGCAGATCAGTGGCGTTCTTAACCCGGCATATAAATGTGGTCAGCCAGTGAGAGTAAGTCCTAGCGAATTCCCTGACTCGAGTGGTTTACCGTTGAATTCGACTGCGGTGGTTAGTTGGCAGATTGTTTGCAATATTACACATGTAAAGAAGGACATCCCAAAGTGCTGTGTTTCGTTTTCGTCGTACTACAATGAATCTGTCATCCCGTGCAGAACGTGTGCTTGTGGATGCTCGCTTAACTCTGCTCGTACATGTAATGCTACCTCCCCTGTAATGCTACTCCCAGCTGAAGCTCTTCTCGTGCCTTTTGAGAATAGGACTGCTATGGCTATTGCTTGGGCTGGTCTTAAACATTTCCCGGTTCCAAACCCGATGCCTTGTTCGGATAACTGCGGAGTTAGTATCAACTGGCATTTGTATACCGATTATAGAGACGGATGGAGTGCGAGGATCACTCTCTTCAACTGGGGAGAAGTGAACTTTGCAGATTGGTTTGCTGCAGTTCAGATGAAGAAAGCAGCACCTGGCTTCCAGGCAATGTACTCTCTCAACGCAACGACCTTGGAATTGGATGGTTCGAACAGTACTATCTTTATGCAGGGTCATCTCGGACTAAACTATCTTGTCGGAGAAACAGATGGAGTGAACCCAGCTAAGGATCCGCGCGTACCTGGAAAACAGCAATCCGTAATCTCATTCACAAAGAAGAACATACAAGGTCTTAACATGGCTGCCGGAGATGGGTTCCCCACCAAGGTGTTCTTCAATGGGGAGGAATGCTTGCTTCCTAAAATACTCCCTGCCAACAACAGCCGAAGAAACTTAGCTCGGTTCATTCCGAGCATCCTAATGCTAGGATTCGTGTTCTTGTTCATACAGCAATAA 1959 46.15 MAVAVADLIFLIIFTTIPFSISQPTEKAPPPAADSCNGIFLSYSFNQGAKLPPNLTVMARQPYRFESTLSILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFAGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNISLANDGYLCTKPILQGKSEMHVCCSPDPRVKTNITTSEVFLARQNGDLTIMYDVTRTYDSSYWAQVTISNHNPLGRLDYWKLSWDWMRDEFIYSMKGAYPSVVDSTECIFGRQGTYYRDLDFFNVLSCKRRPTIVDLPPTKANDTTLGLIPFCCRNGTLLPSHMDPSKSISAFQMQVLKMPPDLNRSQITPPQNWQISGVLNPAYKCGQPVRVSPSEFPDSSGLPLNSTAVVSWQIVCNITHVKKDIPKCCVSFSSYYNESVIPCRTCACGCSLNSARTCNATSPVMLLPAEALLVPFENRTAMAIAWAGLKHFPVPNPMPCSDNCGVSINWHLYTDYRDGWSARITLFNWGEVNFADWFAAVQMKKAAPGFQAMYSLNATTLELDGSNSTIFMQGHLGLNYLVGETDGVNPAKDPRVPGKQQSVISFTKKNIQGLNMAAGDGFPTKVFFNGEECLLPKILPANNSRRNLARFIPSILMLGFVFLFIQQ 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12039793 12042600 + CmaCh14G016010.1 Cma14g01601 308584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01601 652 PANTHER COBRA-LIKE PROTEIN 7 9 650 - -
Cma14g01601 652 PANTHER COBRA-LIKE PROTEIN 7 9 650 - -
Cma14g01601 652 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01550 Cma14g01601 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01601 Cma-Chr14:12039793 Cma16g00850 Cma-Chr16:5020925 0 dispersed
Cma14g01601 Cma-Chr14:12039793 Cma06g01550 Cma-Chr6:9706162 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01601 - - csv:101209258 1204.5