Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01602 ATGTCAGTCTCCGGTGGGGTTTCCATTGCCCGAATCCGTGGCGAGAATCGTTTCTATCATCCCCCTGCGATGCGGCGTCGTTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACACCAGCAGAAGCAGAGCGCTTTGGATTCTAAGGACGTTGTGGCGGCTGCTTCTGCTAGGATCGATGACTTGGAGAAGAGGAGTGAGTTTGACGAGTGTCGTTCTTGGTCCACTCGCTCTGATTGCTCTGTTTCGGATCGTGGACTTGCTGATTCTACTAATTTGGATCGCTTCTTGGAGCAAACTACTCCCCTTGTTTTGGCTCATTGTATTCCGAAGACGAGGCTGAGGGGATGGAGAACTCGTGAAGTCTCAGAGGCACCTCCTTATTTTGTGCTCGGGGATCTTTGGGAATCTTACAAGGAATGGAGTGCGTACGGAGCTGGTATCCCTCTATTGTTAAATGGTAGTGACTCAGTTGTACAGTACTATGTTCCATATCTGTCCGGCATTCAACTCTATATCTATCCATCAAAGTCCTCTGCCCTAAGTAGAAGGCGTGGTACAGATAGTGATGCTGAGTCTTCAAAGGAAACAAGTAGTGATGGAAGCAGTAATTGTGGGGCAGAAAAAAAAACCAAGGCCAATCTTCAGGATGAGTGTATTCAGGACTTAAGTATTTCAGGGTCACAGAGAGCTCTTCAAATGAATACACCTTCTGCCGAGTCATCGAGTGATGAAAGTGACTCTTGCTACCGTCATGGTCAGCTTGTATTTGAATACATGGAGCGTGATCCACCATTTTGTCGCGAACCATTAACCGATAAGATCAATATCCTTGCATCCCGTTTTCCTGAATTAAAGACATATAGGAGCTGTGATTTATCTCCTTCCAGTTGGATTTCTGTGGCATGGTATCCCATTTATCGGATTCCCACGGGTCCAACCCTACAAAGTCTTGATGCTTGTTTCTTGACCTTCCACAATCTGTCAACAGCATTTCAAGGCATCAGCTCTGATGGTTTGCAATTCCAATGGCCAAGAGTTAGAGAGGTGTACACTGCGGATTGCCCTCTCAAACTGCAGTTGCCAATATTTGGACTTGCTTCCTATAAGTTCAAACTTCCTTTTTGGAATTCGACTGGTACCGAGGAATGTTCAAAGGCTCAATCTTTGTGGCAAGATGCTGAATACTGGCTTAGGGTAAATCTGAATCAAGTTGAGGGATCGATGTCTACGGCGAGTTCGAGCTCTGTAAGGAAAGCCGGGGAAGCTGTTCCCGACCAGTTTCCGGTCGGGCTTCGTGTTCTTGTTGTGGATGATGATCCGACCTGTCTTATGATCTTGGAGAAGATGCTTCGTATTTGCCGCTATGATGACACCGGAAGCTGTGTTATTAACGAACAAGTTGTCTGGTTTTTGAGTGTTTCAGTAACGAATTGTAGTCGAGCCGAGGATGCATTGTCTCTTCTCAGACGATACAAAAACGGGTTCGATATCGTTTTAAGCGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAATACATAGGATTAGAAATGGACTTGCCTGTAATCATGATGTCAGTGGATGACGGGAAAAACGTCGTCATGAAGGGAGTAACTCATGGTGCTTGTGACTATTTAATAAAACCTGTTCGAATTGAAGCGATAAAGAACATATGGCAGCACGTTGTTCGTAAGCGGAAGAATGAATGGAAAGACTTGGAGCAATCAGGATGTGTCGATGATGTCGTCGATCGACAGCAGAAAACTAATGAAGATGCAGATTATTCATCGTCTGCTAATGAAGGGAGTTGGAAGAACTCAAAGAGGAGGAAGGAGGACGTAGAAGACGTCGAGGAGAGGGACGATTCATCGACCTTAAAGAAACCGAGGGTCGTTTGGTCCGTTGAGCTCCATCAACAGTTTATGGCTGCTGTTAATCAACTAGGAATTGATAAGGCCGTTCCGAAGAAGATACTCGAGTTGATGAATGTCCCTGGACTCACTAGAGAAAACGTTGCCAGCCACCTTCAGAAATATCGTTTGTACCTGAGAAGAGTAAGTGGAATCACACAACACCAGAGTAATTTAAACAACACGTTCATGAGTGCCCAAGACGTGTTTGGCTCGTCGTTGAATGGTCTTGATCTTCGAACTCTCGCTGCTGCTGGTCAGCTCCAGCCACAAAGCCTTGCTACACTTCAAGCAGCTGGATTCGGTAGGTCTACAGTGAAATCGAGCATGCCTATGCCTCTTGTAGATCAAAGGAACCACATTTTTAGCTTCGAAAATCCGAAGTTGAGATTCGGTGACGAGCAACAGCAACATTTGAATGGTAGTAAATCGATGAATCTACTTCATGGAATCCCGACAACGATGGAGCCGAAACAGCTTGCTAATCTGCAGCAATCGGCGCAATCTCATGGGAATATGACAATGCAAGTTAGTGCACAAGGAAGCCAATCTAGCTCTCAACCACAAGCTAGAGCACAGATTCTCAAAGAAAGTACCTCAACGAGCGTAACGAGGCTTCCACCGACATCGCAGCAGCCAATTTTGCCGAATGGAACGGCCAGTGGAGGGTACAGTGTAGTTTCACCAGCCTCAACAATGTTAAATTTCCCCGAATTTCCCGGTAATAGTTTTCCTCTTCAAAGTACCCCAGGAATGTCGAGTGTCGTACCAAAGGGAAGATTCCCAGACGACGTTAACTCGAACATTAATCGATCGGAAGGTTTTGTGCCAAACTATGATATGTTCAGGGACCTGCATCCTCAGAAGCCCCATGATTGGGACTTGCAACATGTCGGTGTGACGTTTGATATGTCTCAAGGTAGTCTCAACGTTCCATCCTCAGCTTTCGCTCACCAAGGGTATGCTGCCTCTAGCCAACAAAATGGACAAAACAGAAACGCATCTACTGCAGGCAAGGCCATGTTCTTGTTGGACAAACGAAGTGACAATGGGAACGAACAAAGTATAAGCCAACAACTCGACCCTCGTTTCGTCGATGGTTCAGTGAGAGTCAAAGCTGAAAGAGCTCCTGATACAAGCAGTCAGACCGACCTTTTCTCTGAACACTTCGGACCAGAGGACCTAATGAGTGCAGTTCTTAAGCAGGTTAGACCGCAGTACCGTCCTGGCATTCCTAAGACGAAACTCGGGAAGTTTAAGGTTGTTTTTATTAATGATGTGGTAAATGTTTTATTTGACAGCAACAGGGGAGCATTGCAGCAGCTGAAAGTGAACTGGAATGGATGTTTCATCATAACACTCCTGTTTAGAATGTTGCTGTAG 3306 45.95 MSVSGGVSIARIRGENRFYHPPAMRRRLQQQQQQQQQQQHQQKQSALDSKDVVAAASARIDDLEKRSEFDECRSWSTRSDCSVSDRGLADSTNLDRFLEQTTPLVLAHCIPKTRLRGWRTREVSEAPPYFVLGDLWESYKEWSAYGAGIPLLLNGSDSVVQYYVPYLSGIQLYIYPSKSSALSRRRGTDSDAESSKETSSDGSSNCGAEKKTKANLQDECIQDLSISGSQRALQMNTPSAESSSDESDSCYRHGQLVFEYMERDPPFCREPLTDKINILASRFPELKTYRSCDLSPSSWISVAWYPIYRIPTGPTLQSLDACFLTFHNLSTAFQGISSDGLQFQWPRVREVYTADCPLKLQLPIFGLASYKFKLPFWNSTGTEECSKAQSLWQDAEYWLRVNLNQVEGSMSTASSSSVRKAGEAVPDQFPVGLRVLVVDDDPTCLMILEKMLRICRYDDTGSCVINEQVVWFLSVSVTNCSRAEDALSLLRRYKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRIEAIKNIWQHVVRKRKNEWKDLEQSGCVDDVVDRQQKTNEDADYSSSANEGSWKNSKRRKEDVEDVEERDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGITQHQSNLNNTFMSAQDVFGSSLNGLDLRTLAAAGQLQPQSLATLQAAGFGRSTVKSSMPMPLVDQRNHIFSFENPKLRFGDEQQQHLNGSKSMNLLHGIPTTMEPKQLANLQQSAQSHGNMTMQVSAQGSQSSSQPQARAQILKESTSTSVTRLPPTSQQPILPNGTASGGYSVVSPASTMLNFPEFPGNSFPLQSTPGMSSVVPKGRFPDDVNSNINRSEGFVPNYDMFRDLHPQKPHDWDLQHVGVTFDMSQGSLNVPSSAFAHQGYAASSQQNGQNRNASTAGKAMFLLDKRSDNGNEQSISQQLDPRFVDGSVRVKAERAPDTSSQTDLFSEHFGPEDLMSAVLKQVRPQYRPGIPKTKLGKFKVVFINDVVNVLFDSNRGALQQLKVNWNGCFIITLLFRMLL 1101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12043159 12055287 - CmaCh14G016020.1 Cma14g01602 308585

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01602 1101 Gene3D - 433 582 - -
Cma14g01602 1101 Pfam Myb-like DNA-binding domain 634 684 IPR001005 -
Cma14g01602 1101 PANTHER TWO-COMPONENT RESPONSE REGULATOR 406 1039 IPR045279 GO:0009736
Cma14g01602 1101 MobiDBLite consensus disorder prediction 183 210 - -
Cma14g01602 1101 CDD REC_typeB_ARR-like 435 567 - -
Cma14g01602 1101 MobiDBLite consensus disorder prediction 817 858 - -
Cma14g01602 1101 MobiDBLite consensus disorder prediction 29 48 - -
Cma14g01602 1101 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 631 688 IPR017930 -
Cma14g01602 1101 Gene3D - 629 691 - -
Cma14g01602 1101 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 632 685 IPR006447 GO:0003677
Cma14g01602 1101 MobiDBLite consensus disorder prediction 585 626 - -
Cma14g01602 1101 SUPERFAMILY CheY-like 432 574 IPR011006 -
Cma14g01602 1101 MobiDBLite consensus disorder prediction 608 626 - -
Cma14g01602 1101 Pfam Response regulator receiver domain 435 561 IPR001789 GO:0000160
Cma14g01602 1101 PANTHER TWO-COMPONENT RESPONSE REGULATOR 406 1039 - -
Cma14g01602 1101 Pfam Protein of unknown function (DUF789) 92 401 IPR008507 -
Cma14g01602 1101 SMART REC_2 433 563 IPR001789 GO:0000160
Cma14g01602 1101 MobiDBLite consensus disorder prediction 29 50 - -
Cma14g01602 1101 SUPERFAMILY Homeodomain-like 629 689 IPR009057 -
Cma14g01602 1101 ProSiteProfiles Response regulatory domain profile. 434 567 IPR001789 GO:0000160
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01602 - - K14491 csv:101209013 1033.86
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma06g01547 Cma14g01602 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01493 Cma-Chr4:7588079 Cma14g01602 Cma-Chr14:12043159 3.87E-80 dispersed
Cma04g02081 Cma-Chr4:14373690 Cma14g01602 Cma-Chr14:12043159 1.78E-29 dispersed
Cma06g01548 Cma-Chr6:9701157 Cma14g01602 Cma-Chr14:12043159 0 dispersed
Cma11g00478 Cma-Chr11:2318504 Cma14g01602 Cma-Chr14:12043159 4.30E-90 dispersed
Cma14g01602 Cma-Chr14:12043159 Cma15g00927 Cma-Chr15:4880285 2.63E-93 dispersed
Cma18g01000 Cma-Chr18:8409298 Cma14g01602 Cma-Chr14:12043159 2.82E-87 dispersed
Cma19g00442 Cma-Chr19:5383218 Cma14g01602 Cma-Chr14:12043159 1.22E-26 dispersed
Cma14g01602 Cma-Chr14:12043159 Cma17g00351 Cma-Chr17:1926092 0 wgd
Cma14g01602 Cma-Chr14:12043159 Cma06g01547 Cma-Chr6:9691269 0 wgd
Cma14g01602 Cma-Chr14:12043159 Cma08g01254 Cma-Chr8:7655266 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g115 . . . . . Bpe14g01109 . . . . Cma06g01547 Cma14g01602 Car06g01313 Car14g01421 Sed02g1153 Cpe08g00166 Cpe03g01345 Bhi01g01056 Tan10g1049 Cmetu02g1991 . Hepe05g1405 . Lcy11g1370 . . . . . . . . . Cone7ag0121 Cone4ag0124 . . . . Blo02g00488 . . Bda13g00205 . Bpe13g00681 . Bma06g01484 . . Cmo14g01637 . . . . . . . . . . . . . Cla05g00678 Cam05g0745 Cec05g0751 Cco05g0751 Clacu05g0737 Cmu05g0702 Cre05g0776 . Csa03g01496 Chy06g00734 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma12g00050 . 52 256 Response Regulator Gene Family AT3G16857 51.3 6.3e-52 203.0
Cma05g00062 . 310 514 Response Regulator Gene Family AT3G16857 51.3 8.3e-52 202.6
Cma11g00478 CST 18 380 Response Regulator Gene Family AT4G31920 53.8 1.7e-85 314.3
Cma10g00483 . 18 355 Response Regulator Gene Family AT4G31920 55.6 2.0e-81 300.8
Cma08g01254 CCT,CST,ECH 17 281 Response Regulator Gene Family AT4G31920 53.6 1.9e-71 267.7
Cma17g00351 CCT,CST,ECH 27 272 Response Regulator Gene Family AT4G31920 56.5 2.1e-70 264.2
Cma06g01548 CCT,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 8.6e-69 258.8
Cma14g01602 CST 425 699 Response Regulator Gene Family AT4G31920 50.4 1.5e-65 248.1
Cma05g00062 . 269 517 Response Regulator Gene Family AT4G31920 52.4 2.9e-64 243.8
Cma12g00050 . 11 259 Response Regulator Gene Family AT4G31920 50.4 3.0e-61 233.8
Cma06g01548 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cma09g00420 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.4e-39 159.8
Cma01g01650 . 93 255 Response Regulator Gene Family AT1G67710 52.4 7.1e-37 152.5
Cma11g00478 CST 16 384 Response Regulator Gene Family AT2G25180 54.1 4.0e-96 349.7
Cma10g00483 . 16 364 Response Regulator Gene Family AT2G25180 53.7 3.5e-84 310.1
Cma08g01254 CCT,CST,ECH 19 281 Response Regulator Gene Family AT2G25180 56.7 3.0e-75 280.4
Cma12g00050 . 11 256 Response Regulator Gene Family AT2G25180 55.2 1.9e-69 261.2
Cma05g00062 . 269 514 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cma06g01548 CCT,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 5.0e-53 205.7
Cma05g00062 . 330 517 Response Regulator Gene Family AT2G01760 51.0 5.3e-47 185.7
Cma11g00478 CST 79 276 Response Regulator Gene Family AT2G01760 53.6 1.2e-43 174.5
Cma01g01650 . 73 261 Response Regulator Gene Family AT2G01760 51.9 2.1e-43 173.7
Cma10g00483 . 79 276 Response Regulator Gene Family AT2G01760 54.6 6.1e-43 172.2
Cma01g01650 . 8 360 Response Regulator Gene Family AT5G58080 50.3 4.5e-77 286.6
Cma17g00351 CCT,CST,ECH 21 271 Response Regulator Gene Family AT5G58080 55.6 9.3e-67 252.3
Cma05g00062 . 267 516 Response Regulator Gene Family AT5G58080 51.4 3.1e-62 237.3
Cma12g00050 . 9 258 Response Regulator Gene Family AT5G58080 50.2 5.8e-61 233.0
Cma08g01254 CCT,CST,ECH 18 243 Response Regulator Gene Family AT4G16110 66.2 1.9e-78 291.2
Cma17g00351 CCT,CST,ECH 27 251 Response Regulator Gene Family AT4G16110 66.5 2.5e-78 290.8
Cma06g01548 CCT,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.7e-77 287.3
Cma14g01602 CST 421 670 Response Regulator Gene Family AT4G16110 60.3 2.2e-74 277.7
Cma09g00420 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cma01g01650 . 11 233 Response Regulator Gene Family AT4G16110 56.4 4.4e-59 226.9
Cma12g00050 . 10 235 Response Regulator Gene Family AT4G16110 54.5 9.7e-59 225.7
Cma05g00062 . 268 493 Response Regulator Gene Family AT4G16110 53.6 6.3e-58 223.0
Cma10g00483 . 10 249 Response Regulator Gene Family AT4G16110 55.2 1.1e-57 222.2
Cma11g00478 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 4.1e-57 220.3
Cma10g00154 . 27 192 Response Regulator Gene Family AT3G48100 64.7 2.2e-53 206.1
Cma04g00304 . 29 162 Response Regulator Gene Family AT3G48100 73.1 1.2e-51 200.3
Cma04g01600 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.3e-50 196.8
Cma15g00834 . 11 151 Response Regulator Gene Family AT3G48100 59.6 4.4e-41 165.2
Cma03g00130 CST 10 156 Response Regulator Gene Family AT3G48100 57.1 1.7e-40 163.3
Cma14g00515 . 3 154 Response Regulator Gene Family AT3G48100 53.9 4.8e-40 161.8
Cma04g02197 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.8e-40 161.8
Cma07g01364 CST 10 169 Response Regulator Gene Family AT3G48100 52.5 3.1e-39 159.1
Cma04g02368 . 19 176 Response Regulator Gene Family AT3G48100 52.2 1.1e-36 150.6
Cma04g01600 . 1 175 Response Regulator Gene Family AT1G59940 66.5 8.1e-59 224.9
Cma04g00304 . 1 166 Response Regulator Gene Family AT1G59940 65.9 7.1e-55 211.8
Cma10g00154 . 12 188 Response Regulator Gene Family AT1G59940 57.5 3.4e-49 193.0
Cma15g00834 . 5 152 Response Regulator Gene Family AT1G59940 58.1 3.8e-40 162.9
Cma04g02197 . 9 157 Response Regulator Gene Family AT1G59940 58.4 3.8e-40 162.9
Cma14g00515 . 8 152 Response Regulator Gene Family AT1G59940 57.2 6.5e-40 162.2
Cma03g00130 CST 17 154 Response Regulator Gene Family AT1G59940 58.0 6.0e-38 155.6
Cma04g01330 . 9 175 Response Regulator Gene Family AT1G59940 54.5 1.0e-37 154.8
Cma07g01364 CST 11 167 Response Regulator Gene Family AT1G59940 51.0 1.8e-37 154.1
Cma04g02368 . 19 162 Response Regulator Gene Family AT1G59940 57.2 8.7e-37 151.8
Cma04g01600 . 16 226 Response Regulator Gene Family AT1G10470 57.0 3.7e-56 215.7
Cma04g00304 . 23 187 Response Regulator Gene Family AT1G10470 68.5 3.0e-53 206.1
Cma10g00154 . 30 174 Response Regulator Gene Family AT1G10470 64.8 2.1e-46 183.3
Cma14g00515 . 10 152 Response Regulator Gene Family AT1G10470 58.0 1.4e-39 160.6
Cma04g02197 . 15 162 Response Regulator Gene Family AT1G10470 56.8 4.1e-39 159.1
Cma15g00834 . 11 157 Response Regulator Gene Family AT1G10470 57.1 5.4e-39 158.7
Cma03g00130 CST 17 154 Response Regulator Gene Family AT1G10470 60.1 2.7e-38 156.4
Cma07g01364 CST 17 167 Response Regulator Gene Family AT1G10470 55.0 1.7e-37 153.7
Cma04g01330 . 11 182 Response Regulator Gene Family AT1G10470 52.9 1.1e-36 151.0
Cma10g00154 . 27 192 Response Regulator Gene Family AT3G48100 64.7 2.2e-53 206.1
Cma04g00304 . 29 162 Response Regulator Gene Family AT3G48100 73.1 1.2e-51 200.3
Cma04g01600 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.3e-50 196.8
Cma15g00834 . 11 151 Response Regulator Gene Family AT3G48100 59.6 4.4e-41 165.2
Cma03g00130 CST 10 156 Response Regulator Gene Family AT3G48100 57.1 1.7e-40 163.3
Cma14g00515 . 3 154 Response Regulator Gene Family AT3G48100 53.9 4.8e-40 161.8
Cma04g02197 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.8e-40 161.8
Cma07g01364 CST 10 169 Response Regulator Gene Family AT3G48100 52.5 3.1e-39 159.1
Cma04g02368 . 19 176 Response Regulator Gene Family AT3G48100 52.2 1.1e-36 150.6
Cma04g00304 . 11 158 Response Regulator Gene Family AT5G62920 67.6 8.8e-50 194.1
Cma10g00154 . 36 169 Response Regulator Gene Family AT5G62920 73.9 2.6e-49 192.6
Cma04g01600 . 25 168 Response Regulator Gene Family AT5G62920 68.8 7.5e-49 191.0
Cma15g00834 . 11 151 Response Regulator Gene Family AT5G62920 59.6 2.2e-40 162.9
Cma04g02197 . 15 156 Response Regulator Gene Family AT5G62920 59.2 3.7e-40 162.2
Cma03g00130 CST 12 156 Response Regulator Gene Family AT5G62920 57.2 1.8e-39 159.8
Cma14g00515 . 10 154 Response Regulator Gene Family AT5G62920 55.9 3.2e-39 159.1
Cma07g01364 CST 12 169 Response Regulator Gene Family AT5G62920 52.5 7.0e-39 157.9
Cma10g00154 . 43 191 Response Regulator Gene Family AT1G19050 68.9 1.2e-50 197.2
Cma04g01600 . 15 185 Response Regulator Gene Family AT1G19050 57.0 2.5e-45 179.5
Cma04g00304 . 28 186 Response Regulator Gene Family AT1G19050 60.6 7.3e-45 177.9
Cma15g00834 . 3 154 Response Regulator Gene Family AT1G19050 52.0 4.6e-39 158.7
Cma04g02197 . 9 159 Response Regulator Gene Family AT1G19050 53.0 1.3e-38 157.1
Cma14g00515 . 8 154 Response Regulator Gene Family AT1G19050 54.4 2.3e-38 156.4
Cma03g00130 CST 11 156 Response Regulator Gene Family AT1G19050 55.5 2.3e-38 156.4
Cma07g01364 CST 11 169 Response Regulator Gene Family AT1G19050 50.3 1.1e-37 154.1
Cma03g00130 CST 8 265 Response Regulator Gene Family AT2G41310 52.7 8.7e-60 227.6
Cma14g00515 . 1 156 Response Regulator Gene Family AT2G41310 73.1 6.9e-57 218.0
Cma07g01364 CST 8 171 Response Regulator Gene Family AT2G41310 66.9 9.3e-54 207.6
Cma15g00834 . 8 153 Response Regulator Gene Family AT2G41310 66.4 3.1e-49 192.6
Cma04g02197 . 12 158 Response Regulator Gene Family AT2G41310 66.7 2.0e-48 189.9
Cma04g02368 . 11 161 Response Regulator Gene Family AT2G41310 58.8 3.7e-42 169.1
Cma04g00304 . 25 158 Response Regulator Gene Family AT2G41310 58.9 3.7e-42 169.1
Cma04g01600 . 25 158 Response Regulator Gene Family AT2G41310 59.6 3.1e-41 166.0
Cma15g00671 . 29 170 Response Regulator Gene Family AT2G41310 60.4 2.9e-39 159.5
Cma10g00154 . 42 172 Response Regulator Gene Family AT2G41310 59.0 3.8e-39 159.1
Cma03g00130 CST 8 265 Response Regulator Gene Family AT3G57040 53.1 1.0e-63 240.7
Cma14g00515 . 1 158 Response Regulator Gene Family AT3G57040 75.9 4.1e-60 228.8
Cma15g00834 . 1 153 Response Regulator Gene Family AT3G57040 69.9 1.6e-51 200.3
Cma04g02197 . 12 158 Response Regulator Gene Family AT3G57040 68.0 2.2e-50 196.4
Cma04g01330 . 4 184 Response Regulator Gene Family AT3G57040 59.6 3.6e-48 189.1
Cma04g02368 . 15 187 Response Regulator Gene Family AT3G57040 54.6 5.3e-44 175.3
Cma04g00304 . 25 158 Response Regulator Gene Family AT3G57040 60.1 7.0e-44 174.9
Cma04g01600 . 25 158 Response Regulator Gene Family AT3G57040 59.4 1.7e-42 170.2
Cma10g00154 . 42 172 Response Regulator Gene Family AT3G57040 59.6 6.1e-40 161.8
Cma15g00671 . 29 170 Response Regulator Gene Family AT3G57040 60.4 8.0e-40 161.4
Cma04g00100 . 14 144 Response Regulator Gene Family AT3G57040 55.1 1.8e-36 150.2
Cma10g00154 . 43 191 Response Regulator Gene Family AT1G74890 71.1 1.4e-51 200.3
Cma04g00304 . 25 188 Response Regulator Gene Family AT1G74890 60.8 2.7e-47 186.0
Cma04g01600 . 25 187 Response Regulator Gene Family AT1G74890 61.8 2.7e-47 186.0
Cma15g00834 . 7 146 Response Regulator Gene Family AT1G74890 58.6 1.4e-40 163.7
Cma14g00515 . 8 152 Response Regulator Gene Family AT1G74890 55.9 6.0e-39 158.3
Cma03g00130 CST 12 149 Response Regulator Gene Family AT1G74890 58.7 1.7e-38 156.8
Cma04g02197 . 15 151 Response Regulator Gene Family AT1G74890 58.4 2.3e-38 156.4
Cma07g01364 CST 12 162 Response Regulator Gene Family AT1G74890 55.0 3.0e-38 156.0
Cma04g01330 . 5 166 Response Regulator Gene Family AT1G74890 53.7 7.3e-37 151.4
Cma04g00100 . 16 145 Response Regulator Gene Family AT2G40670 66.4 6.0e-42 167.9
Cma04g00304 . 26 159 Response Regulator Gene Family AT2G40670 56.2 3.3e-40 162.2
Cma14g00515 . 6 154 Response Regulator Gene Family AT2G40670 56.0 4.3e-40 161.8
Cma04g01600 . 26 159 Response Regulator Gene Family AT2G40670 55.5 3.7e-39 158.7
Cma03g00130 CST 13 156 Response Regulator Gene Family AT2G40670 52.4 1.3e-36 150.2
Cma04g00100 . 16 145 Response Regulator Gene Family AT3G56380 67.9 3.0e-43 172.2
Cma04g00304 . 26 159 Response Regulator Gene Family AT3G56380 55.6 6.2e-41 164.5
Cma04g01600 . 26 159 Response Regulator Gene Family AT3G56380 54.8 4.0e-40 161.8
Cma14g00515 . 6 154 Response Regulator Gene Family AT3G56380 54.0 4.5e-39 158.3
Cma10g00154 . 32 172 Response Regulator Gene Family AT3G56380 58.3 3.8e-38 155.2
Cma04g02197 . 15 159 Response Regulator Gene Family AT3G56380 54.1 9.3e-37 150.6
Cma12g00050 . 52 256 Response Regulator Gene Family AT3G16857 51.3 6.3e-52 203.0
Cma05g00062 . 310 514 Response Regulator Gene Family AT3G16857 51.3 8.3e-52 202.6
Cma08g01254 CCT,CST,ECH 18 243 Response Regulator Gene Family AT4G16110 66.2 1.9e-78 291.2
Cma17g00351 CCT,CST,ECH 27 251 Response Regulator Gene Family AT4G16110 66.5 2.5e-78 290.8
Cma06g01548 CCT,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.7e-77 287.3
Cma14g01602 CST 421 670 Response Regulator Gene Family AT4G16110 60.3 2.2e-74 277.7
Cma09g00420 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cma01g01650 . 11 233 Response Regulator Gene Family AT4G16110 56.4 4.4e-59 226.9
Cma12g00050 . 10 235 Response Regulator Gene Family AT4G16110 54.5 9.7e-59 225.7
Cma05g00062 . 268 493 Response Regulator Gene Family AT4G16110 53.6 6.3e-58 223.0
Cma10g00483 . 10 249 Response Regulator Gene Family AT4G16110 55.2 1.1e-57 222.2
Cma11g00478 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 4.1e-57 220.3
Cma11g00478 CST 18 380 Response Regulator Gene Family AT4G31920 53.8 1.7e-85 314.3
Cma10g00483 . 18 355 Response Regulator Gene Family AT4G31920 55.6 2.0e-81 300.8
Cma08g01254 CCT,CST,ECH 17 281 Response Regulator Gene Family AT4G31920 53.6 1.9e-71 267.7
Cma17g00351 CCT,CST,ECH 27 272 Response Regulator Gene Family AT4G31920 56.5 2.1e-70 264.2
Cma06g01548 CCT,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 8.6e-69 258.8
Cma14g01602 CST 425 699 Response Regulator Gene Family AT4G31920 50.4 1.5e-65 248.1
Cma05g00062 . 269 517 Response Regulator Gene Family AT4G31920 52.4 2.9e-64 243.8
Cma12g00050 . 11 259 Response Regulator Gene Family AT4G31920 50.4 3.0e-61 233.8
Cma06g01548 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cma09g00420 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.4e-39 159.8
Cma01g01650 . 93 255 Response Regulator Gene Family AT1G67710 52.4 7.1e-37 152.5
Cma11g00478 CST 16 384 Response Regulator Gene Family AT2G25180 54.1 4.0e-96 349.7
Cma10g00483 . 16 364 Response Regulator Gene Family AT2G25180 53.7 3.5e-84 310.1
Cma08g01254 CCT,CST,ECH 19 281 Response Regulator Gene Family AT2G25180 56.7 3.0e-75 280.4
Cma12g00050 . 11 256 Response Regulator Gene Family AT2G25180 55.2 1.9e-69 261.2
Cma05g00062 . 269 514 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cma06g01548 CCT,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 5.0e-53 205.7
Cma05g00062 . 330 517 Response Regulator Gene Family AT2G01760 51.0 5.3e-47 185.7
Cma11g00478 CST 79 276 Response Regulator Gene Family AT2G01760 53.6 1.2e-43 174.5
Cma01g01650 . 73 261 Response Regulator Gene Family AT2G01760 51.9 2.1e-43 173.7
Cma10g00483 . 79 276 Response Regulator Gene Family AT2G01760 54.6 6.1e-43 172.2
Cma01g01650 . 8 360 Response Regulator Gene Family AT5G58080 50.3 4.5e-77 286.6
Cma17g00351 CCT,CST,ECH 21 271 Response Regulator Gene Family AT5G58080 55.6 9.3e-67 252.3
Cma05g00062 . 267 516 Response Regulator Gene Family AT5G58080 51.4 3.1e-62 237.3
Cma12g00050 . 9 258 Response Regulator Gene Family AT5G58080 50.2 5.8e-61 233.0
Cma01g00801 . 6 552 Response Regulator Gene Family AT5G61380 50.7 8.6e-142 501.5
Cma13g01146 . 425 948 Response Regulator Gene Family AT5G61380 51.4 1.4e-139 494.2
Cma07g00944 . 40 216 Response Regulator Gene Family AT5G60100 70.2 6.4e-61 232.3
Cma03g00464 . 38 205 Response Regulator Gene Family AT5G60100 67.3 8.4e-53 205.3
Cma15g00995 . 374 515 Response Regulator Gene Family AT5G60100 57.7 1.0e-42 171.8
Cma14g02156 . 105 239 Response Regulator Gene Family AT5G60100 61.5 9.6e-41 165.2
Cma03g00464 . 77 205 Response Regulator Gene Family AT5G24470 58.1 4.0e-37 153.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001295 2 3 2 2 2 2 4 2 2 2 2 2 4 2 2 4 2 4 4 2 2 2 2 2 2 2 2 7 3 1 76
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36306 PF05623 DUF789 7.80E-95 No_clan Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma14g01602 Cma_Chr14 FPKM 6.03929 5.626109 10.821076 11.227719 5.558659 6.385341 4.930206 4.590246 4.559993 4.287551