Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01621 ATGGGTTTGCCTTTAATATGCATATTTCGTCTATCTTCACTTCTTCTTCTTTTCATTTCTTTTGATCTTCATCTGCTTCGATTCCCTCCTCTTCGGTCATATACTATGCTTCACGAAGCTTCGACAAAACATGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGGTAATATAGATGAAATCCGTGAGGTTTCCGACAAGTTTGAGATCCAGCCTGGACTTCAAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCTACCCTAGCAAACACAAATATATGCAATGGGTTAATAGGAGAAGAAATTCTTCCGACTTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCCACGTCGATGCAGAGTAGTCTGTCAAACTTAAGTTGCAGTCCATCTACCCCAACATCTGATTATGATTCATACTTATCGAAATCCATGAGTGCCCCTTCCGGAAGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGGAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAGCCTCCGACGGTTTGGAGATGGATAATTCACATCCTCTGGATGATGGTAGCATTACTCATGAAAGATTTTCTCCTTTGAAAAACAATAGTAATAATGCTTCAGATATCCACAGTGTATTCGAGAACCATTCATATGCCAAAGCAGGAATGACTAACTATCCTCTGAGGCATGGGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAGCAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTCTCTGTTGGATCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTATACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGACGTGAGAGGAGATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCATGGCTACATCATGATCATCCTGATGATCCGACAATCATTATCGGTGGGAAAGTTAAAGGAAAACTAAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGTCGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCGAGTTCCTAGCCTAATAAGCCCTCCCTATGTTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTGTTTGACTTTTTTGGCAATGAGGAAGCAGTGAACCTTGTCCGTTCATATATCTTGAGCAACCCTACCGGTGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAA 1662 41.64 MGLPLICIFRLSSLLLLFISFDLHLLRFPPLRSYTMLHEASTKHEGELEVSFGYKCNGNIDEIREVSDKFEIQPGLQRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSMQSSLSNLSCSPSTPTSDYDSYLSKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNEASDGLEMDNSHPLDDGSITHERFSPLKNNSNNASDIHSVFENHSYAKAGMTNYPLRHGVLDSLQRALSQAENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDVRGDGGLKAVQLTESHTVDNELERAWLHHDHPDDPTIIIGGKVKGKLKVTRAFGVGYLKSKKFNDALMGILRVPSLISPPYVSTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVRSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12163289 12168381 + CmaCh14G016210.1 Cma14g01621 308604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01621 553 CDD PP2Cc 187 540 IPR001932 -
Cma14g01621 553 Pfam Protein phosphatase 2C 271 491 IPR001932 -
Cma14g01621 553 SUPERFAMILY PP2C-like 188 541 IPR036457 -
Cma14g01621 553 Gene3D - 154 549 IPR036457 -
Cma14g01621 553 SMART PP2C_4 165 538 IPR001932 -
Cma14g01621 553 ProSiteProfiles PPM-type phosphatase domain profile. 174 540 IPR001932 -
Cma14g01621 553 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 39 552 - -
Cma14g01621 553 PANTHER PROTEIN PHOSPHATASE 2C 39 552 IPR015655 GO:0004722|GO:0006470
Cma14g01621 553 Coils Coil 302 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01621 Cma-Chr14:12163289 Cma20g00405 Cma-Chr20:1941128 7.25E-75 dispersed
Cma14g01621 Cma-Chr14:12163289 Cma06g01497 Cma-Chr6:9510194 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01621 - - bhj:120073713 915.605