Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01637 GATGTCAGTTTCTTCTTCGATTTGGTGATCTGCTCCTCGGCCGTGTTGGTTGCGATCTTTCCCTGTAATGGGTACTCCGAATTCTTGAGTTTGATAGCGATTAAGACCAAGAAAAGGGGTTTTCATGGCAATTTGGAGATGGTTTGGCTCTGTAATTGGGTTTGTTCTAGTGGGGTTTCTTTCTTTGTTGTTGTTTTTGGTTGTTTTCATTTGATTATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGACGGTAATGGTGTGAAGGATGCTACTAAGAAGGATTCAGCTAAGGATGGCTCTGCTGCTCAGTCTCACCATGTTACCAGATTGCTAGTTCTTACAGATAAATCGAAGTCGAAGAGTGTATCCGATGCTAAGAAGGAGCCAACGGTTCAAAAGGATGGAACAACGGCACATATTGCAGCCCAAACGTTTACATTTCGGGAGCTCGCTACAGCCACGAAGAACTTCAGATCCGAATGCTTGCTGGGAGAAGGGGGGTTCGGAAGGGTTTACAAGGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTCGACCGTAACGGTCTTCAAGGAAATCGGGAGTTTTTGGTGGAGGTTCTCATGCTTAGCCTGTTACATCACCCGAATCTTGTTAACTTGATAGGTTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTACGAGTTTATGCCATTGGGTTCGTTGGAAGATCATTTGCACGATCTTCCACCTGATAAGGAGCCCTTGGATTGGAATATTAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAGTATTTGCACGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTCGATGAGGGCTACCACCCGAAGCTGTCAGATTTCGGTCTAGCAAAACTCGGTCCAGTTGGTGATAAGACTCACGTCTCGACGAGAGTGATGGGAACATATGGTTATTGTGCTCCAGAGTATGCTATGACTGGTCAGCTCACTCTCAAATCAGATGTATATAGTTTTGGAGTCGTCTTTCTAGAACTCATCACAGGGCGTAAGGCGATCGATAATACTAGAGGTCCCGGGGAGCATAATCTCGTGGCATGGGCTCGACCACTTTTTAAAGATCGTCGGAAGTTCCCGAAGATGGCCGATCCACTGCTGCAAGGTCGTTATCCCATGCGGGGACTTTATCAGGCATTGGCCGTTGCAGCAATGTGCTTGCAGGAACAGGCTGCAACAAGACCTCTAATTGGGGATGTTGTTACTGCATTGACATATTTAGCTTCCCAAGCTTATGATCCAAATGCAGCTGCTTCTCAAAGCAATCGAATGGGTGGATCGACTCCACGAGCTCGAGATGATCGACGAGGTTTATCTGATGGACTGGATAGTCCGGATGAGCGTGGACGAGGACGTGGTTCCCCATCGAACTACAGAAACTCACCGGACTACCGAAGGAAAGACCTCCATAGGGAATTGAGTTGTGGAGGTACAGAGCTGAACAAAATCGACACGGGAGGCGGATCCGGTCGAAAATGGGGATTGGATGAGCTAGAACGACAAGAATCTCTTCGAGACAGTCCTGTATATACGGGGAGAGGTAGGGAAACGCCGAGGAACCGTGACCTGAACAGAGAACGTGCAGTCGCTGAAGCAAAAGTGTGGGGCGAAAACTGGAGAGAGCGGAAGCGGGCAAACGCTCAAGGGAGCTTTGATGGTTCACAGGAATGA 1761 47.81 DVSFFFDLVICSSAVLVAIFPCNGYSEFLSLIAIKTKKRGFHGNLEMVWLCNWVCSSGVSFFVVVFGCFHLIMGGCFPCFGSSDEDGNGVKDATKKDSAKDGSAAQSHHVTRLLVLTDKSKSKSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNIRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQAYDPNAAASQSNRMGGSTPRARDDRRGLSDGLDSPDERGRGRGSPSNYRNSPDYRRKDLHRELSCGGTELNKIDTGGGSGRKWGLDELERQESLRDSPVYTGRGRETPRNRDLNRERAVAEAKVWGENWRERKRANAQGSFDGSQE 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12259054 12263718 + CmaCh14G016370.1 Cma14g01637 308620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01637 586 ProSiteProfiles Protein kinase domain profile. 160 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01637 586 CDD STKc_IRAK 166 435 - -
Cma14g01637 586 Pfam Protein kinase domain 164 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01637 586 Gene3D Transferase(Phosphotransferase) domain 1 237 455 - -
Cma14g01637 586 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 73 580 - -
Cma14g01637 586 SMART serkin_6 160 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01637 586 Gene3D Phosphorylase Kinase; domain 1 130 236 - -
Cma14g01637 586 PANTHER OS07G0668900 PROTEIN 73 580 - -
Cma14g01637 586 MobiDBLite consensus disorder prediction 446 555 - -
Cma14g01637 586 MobiDBLite consensus disorder prediction 491 507 - -
Cma14g01637 586 ProSitePatterns Protein kinases ATP-binding region signature. 166 189 IPR017441 GO:0005524
Cma14g01637 586 MobiDBLite consensus disorder prediction 458 483 - -
Cma14g01637 586 SUPERFAMILY Protein kinase-like (PK-like) 142 434 IPR011009 -
Cma14g01637 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01475 Cma14g01637 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00010 Cma-Chr8:56342 Cma14g01637 Cma-Chr14:12259054 0 dispersed
Cma10g01034 Cma-Chr10:5682435 Cma14g01637 Cma-Chr14:12259054 3.38E-154 dispersed
Cma13g00169 Cma-Chr13:1291866 Cma14g01637 Cma-Chr14:12259054 1.24E-180 dispersed
Cma14g00183 Cma-Chr14:761708 Cma14g01637 Cma-Chr14:12259054 0 dispersed
Cma14g01086 Cma-Chr14:7401524 Cma14g01637 Cma-Chr14:12259054 7.25E-91 dispersed
Cma14g01637 Cma-Chr14:12259054 Cma17g01421 Cma-Chr17:9377727 0 dispersed
Cma14g01637 Cma-Chr14:12259054 Cma06g01475 Cma-Chr6:9381522 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69095 PF00069 Pkinase 2.10E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01637 - - cmax:111479363 1070.46