Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01644 ATGGGGTGTGTTTTTGGCCGAGAGGTCTCTGCGAAGCCTGTCCAGAGAGCGGAGGCGGAGGCGGAGGAGGAGGAGAGACCGAAGGCCGCAGCGGCGGCGGAGGAAATTAGGGCTTCTGCTAAACCGGTGGTTGCTGTGGCTAATGCTAATGCTAATGCTAATGCTCGCAATGGTGGCTGCAGGAAGGAGGTTGAGGATCATAGAGGTTTGAGGTCGAGAGGCGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCCGGTTGGCCTGCTTGGCTCTCCGCTGTTGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGATTCTTTCGAGAAGCTTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTTATGGCTCGAGAAATTCTCATTCTGCGACGTTTGGATCATCCTAATGTTGTGAAACTCGAAGGTTTAGTGACATCCCGGATGTCATGTAGTTTATATCTTGTGTTTGAATACATGGAGCATGATTTGGCTGGACTTGCTGCGAGCCCAACGATCAAGTTTACCGAACCGCAGGTTAAATGTTATATGAACCAATTGTTATCAGGGCTCGAACACTGCCACAACCGTCACGTGCTGCATCGCGATATAAAGGGATCGAATCTTCTGATTGGTAATGATGGGATCCTTAGGATAGCTGATTTCGGGTTAGCTTCCGTCTTTGATCCGAACCAGAAGCAGCCTATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTCGGAGCTACCGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAGGAATACTGGAAGAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACGTTTAAAGACTTCCCGCCATCGTCTCTGCCGCTAATCGAGACACTTCTTGCAATCGACCCAGATGAACGCCTGACTGCCACTGCTGCGTTACATAGTGAGTTTTTCACTACCAAGCCATATGCCTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGGTGCAATGCAGATGGGGTGAAGAAATCACGGGCACGCGATCGAGCTGTTCGTGCAATTCCCGTTCCAGAAGCCAATGCTGAGCTTCAGGCCAATCTCGATCGGCGACGTCTCATTACACACGCAAATGCAAAGAGCAAGAGCGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACTATCTAGGAACTTCACATCACATCGATCCAATCTATGATCCTCCCGACGTTCCATTTAGCTCCATGAATTTCTCGTACCCGAAAGCAAACATTCATACATGGTCTGGTCCATTGATGGATCCAGCTGCTGTTGGTGCTCCAAGACGAAAAAAACACACAGCAGGGGATTGTCATTCATCAAAGGACTTACGAAAAGATAAACACTCTGCTCGAGTCTAA 1737 49.45 MGCVFGREVSAKPVQRAEAEAEEEERPKAAAAAEEIRASAKPVVAVANANANANARNGGCRKEVEDHRGLRSRGERRRRPNPRSSNPPKHVHGEQVAAGWPAWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDPNQKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCISETFKDFPPSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRCNADGVKKSRARDRAVRAIPVPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYYLGTSHHIDPIYDPPDVPFSSMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDCHSSKDLRKDKHSARV 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12296897 12300335 + CmaCh14G016440.1 Cma14g01644 308627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01644 578 MobiDBLite consensus disorder prediction 13 32 - -
Cma14g01644 578 Pfam Protein kinase domain 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01644 578 CDD STKc_CDK9_like 123 407 - -
Cma14g01644 578 MobiDBLite consensus disorder prediction 551 578 - -
Cma14g01644 578 PANTHER OS01G0367700 PROTEIN 67 562 - -
Cma14g01644 578 PANTHER CELL DIVISION PROTEIN KINASE 67 562 - -
Cma14g01644 578 SMART serkin_6 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01644 578 MobiDBLite consensus disorder prediction 1 33 - -
Cma14g01644 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Cma14g01644 578 Gene3D Transferase(Phosphotransferase) domain 1 206 446 - -
Cma14g01644 578 ProSiteProfiles Protein kinase domain profile. 123 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01644 578 Gene3D Phosphorylase Kinase; domain 1 110 205 - -
Cma14g01644 578 MobiDBLite consensus disorder prediction 548 578 - -
Cma14g01644 578 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Cma14g01644 578 SUPERFAMILY Protein kinase-like (PK-like) 116 412 IPR011009 -
Cma14g01644 578 MobiDBLite consensus disorder prediction 51 95 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01464 Cma14g01644 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g01100 Cma-Chr12:8707865 Cma14g01644 Cma-Chr14:12296897 0 dispersed
Cma13g00826 Cma-Chr13:6918269 Cma14g01644 Cma-Chr14:12296897 0 dispersed
Cma14g01644 Cma-Chr14:12296897 Cma18g00299 Cma-Chr18:1596685 0 dispersed
Cma15g00248 Cma-Chr15:1187701 Cma14g01644 Cma-Chr14:12296897 0 dispersed
Cma14g01644 Cma-Chr14:12296897 Cma06g01464 Cma-Chr6:9351664 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69096 PF00069 Pkinase 2.60E-68 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01644 K08819 - csv:101217952 1009.59