Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g01644 | ATGGGGTGTGTTTTTGGCCGAGAGGTCTCTGCGAAGCCTGTCCAGAGAGCGGAGGCGGAGGCGGAGGAGGAGGAGAGACCGAAGGCCGCAGCGGCGGCGGAGGAAATTAGGGCTTCTGCTAAACCGGTGGTTGCTGTGGCTAATGCTAATGCTAATGCTAATGCTCGCAATGGTGGCTGCAGGAAGGAGGTTGAGGATCATAGAGGTTTGAGGTCGAGAGGCGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCCGGTTGGCCTGCTTGGCTCTCCGCTGTTGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGATTCTTTCGAGAAGCTTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTTATGGCTCGAGAAATTCTCATTCTGCGACGTTTGGATCATCCTAATGTTGTGAAACTCGAAGGTTTAGTGACATCCCGGATGTCATGTAGTTTATATCTTGTGTTTGAATACATGGAGCATGATTTGGCTGGACTTGCTGCGAGCCCAACGATCAAGTTTACCGAACCGCAGGTTAAATGTTATATGAACCAATTGTTATCAGGGCTCGAACACTGCCACAACCGTCACGTGCTGCATCGCGATATAAAGGGATCGAATCTTCTGATTGGTAATGATGGGATCCTTAGGATAGCTGATTTCGGGTTAGCTTCCGTCTTTGATCCGAACCAGAAGCAGCCTATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTCGGAGCTACCGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAGGAATACTGGAAGAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACGTTTAAAGACTTCCCGCCATCGTCTCTGCCGCTAATCGAGACACTTCTTGCAATCGACCCAGATGAACGCCTGACTGCCACTGCTGCGTTACATAGTGAGTTTTTCACTACCAAGCCATATGCCTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGGTGCAATGCAGATGGGGTGAAGAAATCACGGGCACGCGATCGAGCTGTTCGTGCAATTCCCGTTCCAGAAGCCAATGCTGAGCTTCAGGCCAATCTCGATCGGCGACGTCTCATTACACACGCAAATGCAAAGAGCAAGAGCGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACTATCTAGGAACTTCACATCACATCGATCCAATCTATGATCCTCCCGACGTTCCATTTAGCTCCATGAATTTCTCGTACCCGAAAGCAAACATTCATACATGGTCTGGTCCATTGATGGATCCAGCTGCTGTTGGTGCTCCAAGACGAAAAAAACACACAGCAGGGGATTGTCATTCATCAAAGGACTTACGAAAAGATAAACACTCTGCTCGAGTCTAA | 1737 | 49.45 | MGCVFGREVSAKPVQRAEAEAEEEERPKAAAAAEEIRASAKPVVAVANANANANARNGGCRKEVEDHRGLRSRGERRRRPNPRSSNPPKHVHGEQVAAGWPAWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDPNQKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCISETFKDFPPSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRCNADGVKKSRARDRAVRAIPVPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYYLGTSHHIDPIYDPPDVPFSSMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDCHSSKDLRKDKHSARV | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 12296897 | 12300335 | + | CmaCh14G016440.1 | Cma14g01644 | 308627 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g01644 | 578 | MobiDBLite | consensus disorder prediction | 13 | 32 | - | - | |
Cma14g01644 | 578 | Pfam | Protein kinase domain | 123 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01644 | 578 | CDD | STKc_CDK9_like | 123 | 407 | - | - | |
Cma14g01644 | 578 | MobiDBLite | consensus disorder prediction | 551 | 578 | - | - | |
Cma14g01644 | 578 | PANTHER | OS01G0367700 PROTEIN | 67 | 562 | - | - | |
Cma14g01644 | 578 | PANTHER | CELL DIVISION PROTEIN KINASE | 67 | 562 | - | - | |
Cma14g01644 | 578 | SMART | serkin_6 | 123 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01644 | 578 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cma14g01644 | 578 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 243 | 255 | IPR008271 | GO:0004672|GO:0006468 | |
Cma14g01644 | 578 | Gene3D | Transferase(Phosphotransferase) domain 1 | 206 | 446 | - | - | |
Cma14g01644 | 578 | ProSiteProfiles | Protein kinase domain profile. | 123 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01644 | 578 | Gene3D | Phosphorylase Kinase; domain 1 | 110 | 205 | - | - | |
Cma14g01644 | 578 | MobiDBLite | consensus disorder prediction | 548 | 578 | - | - | |
Cma14g01644 | 578 | ProSitePatterns | Protein kinases ATP-binding region signature. | 129 | 152 | IPR017441 | GO:0005524 | |
Cma14g01644 | 578 | SUPERFAMILY | Protein kinase-like (PK-like) | 116 | 412 | IPR011009 | - | |
Cma14g01644 | 578 | MobiDBLite | consensus disorder prediction | 51 | 95 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma06g01464 | Cma14g01644 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma12g01100 | Cma-Chr12:8707865 | Cma14g01644 | Cma-Chr14:12296897 | 0 | dispersed | |
Cma13g00826 | Cma-Chr13:6918269 | Cma14g01644 | Cma-Chr14:12296897 | 0 | dispersed | |
Cma14g01644 | Cma-Chr14:12296897 | Cma18g00299 | Cma-Chr18:1596685 | 0 | dispersed | |
Cma15g00248 | Cma-Chr15:1187701 | Cma14g01644 | Cma-Chr14:12296897 | 0 | dispersed | |
Cma14g01644 | Cma-Chr14:12296897 | Cma06g01464 | Cma-Chr6:9351664 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69096 | PF00069 | Pkinase | 2.60E-68 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g01644 | K08819 | - | csv:101217952 | 1009.59 |