Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01665 ATGAGAATCTTAGAAGAGGTTTTCTTGCAAGAAACTTGTTCTTGCACGAATTTGGTTCTTGGAAGAGAATCCATGGGTTGTGTTCTTGGAAAGTGTTTAACTTCCAGTCGCTACCCGCGGCCTTCTGACGGCGATATGACCCAATCCTGCGATGCTCCGCCGTGTAGTTTAGAAGGAAAACATGTACTAACGGGAAGGTTATTGGAGTCTGTTCGTGTGCCTTCTCATAACTTCCGTTTGGAGTACTCGCTCCTGACCCAGCGCGGCTACTACCCTGATTCCCCTGATAAAGAAAACCAAGACAGCTTCTGTGTCAGTACACAAATGGGAGGTAATCCGAATATCCATTTATTTGGTGTCTTTGATGGCCATGGTCAATTCGGATCGCTGTGTTCTAATTTCGTTAAGGAGAAGATTGTGCAAATGCTATGTAACGATTCTAAATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTTTTGACCTTAAATGATGAATTGCGTAGTAGTGATATTGATGATTCCATGAGCGGCACTACAGCCATTACTGCTCTTGTTCTTGGGAATACCCTTTACGTTGCCAATGTGGGCGATTCGAGGGCAGTAATGGCTGTTAGAGTTGGGAATCGAATTGTTGCCGAGGATATGTCCCATGATCAAACACCATTTAGGAAGGATGAGTGCGAGAGAGTAAAGCTGGCCGGGGCTAGAGTGTTGACCATTGATCAAATTGAAGGGCTTAAAGATCCGGATATTCAAGTATGGGGTGATGAGGAGACCGAGGGAAATGATCCTCCTCGATTGTGGTTTGCTGATAGCTTGTACCCTGGTACTGCATTTACACGGAGCGTAGGAGACAGTACAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTAGTTGAGCTGACTCAAAACCATCTTTTCTTTGTTGTTGCAAGCGATGGAGTTTTCGAGTTCCTTACGAGCCAAGCTGTTGTTGATATGGCTGCAAGGTATACCGATCCACGGGATGCATGCTCAGCTATTGCTGGAGAATCATATAAGCTATGGCTGGATCATGAAAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAGGGCTTCTCTAGTTCAGGCGCTGCTGCAATTGTTGGGCAGCATGGACTCCGCATAAGCCATGCAAGTTCAGAGTGGGGAAGCTCGGAGGCCTTTTGCTCCATTAGAAGTGATTTCTCAGATCCACAGGTCTCTCAGCATGTGGGCTTGATGAACAGGAACACAGCAATTGCTGTTCCATCTCTCACGCAGTACCGACCATTGGAAGTGGTGAGAAGTGGGTTAATGGGGAGTATGCCTTCCCCTAGCTGCTAA 1368 46.13 MRILEEVFLQETCSCTNLVLGRESMGCVLGKCLTSSRYPRPSDGDMTQSCDAPPCSLEGKHVLTGRLLESVRVPSHNFRLEYSLLTQRGYYPDSPDKENQDSFCVSTQMGGNPNIHLFGVFDGHGQFGSLCSNFVKEKIVQMLCNDSKLLEDPVKAYNSAFLTLNDELRSSDIDDSMSGTTAITALVLGNTLYVANVGDSRAVMAVRVGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLKDPDIQVWGDEETEGNDPPRLWFADSLYPGTAFTRSVGDSTAEKIGVTAVPEVSVVELTQNHLFFVVASDGVFEFLTSQAVVDMAARYTDPRDACSAIAGESYKLWLDHENRTDDITIIIVHIKGFSSSGAAAIVGQHGLRISHASSEWGSSEAFCSIRSDFSDPQVSQHVGLMNRNTAIAVPSLTQYRPLEVVRSGLMGSMPSPSC 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12453529 12456698 - CmaCh14G016650.1 Cma14g01665 308648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01665 455 Gene3D - 72 373 IPR036457 -
Cma14g01665 455 SUPERFAMILY PP2C-like 68 373 IPR036457 -
Cma14g01665 455 ProSiteProfiles PPM-type phosphatase domain profile. 81 371 IPR001932 -
Cma14g01665 455 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 61 440 - -
Cma14g01665 455 SMART PP2C_4 77 369 IPR001932 -
Cma14g01665 455 Pfam Protein phosphatase 2C 106 347 IPR001932 -
Cma14g01665 455 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Cma14g01665 455 CDD PP2Cc 97 371 IPR001932 -
Cma14g01665 455 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 61 440 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g01186 Cma14g01665 CCT
Cma14g01665 Cma17g00286 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00630 Cma-Chr11:3041094 Cma14g01665 Cma-Chr14:12453529 1.51E-136 dispersed
Cma14g01665 Cma-Chr14:12453529 Cma03g00317 Cma-Chr3:4017893 1.81E-28 dispersed
Cma01g00090 Cma-Chr1:416403 Cma14g01665 Cma-Chr14:12453529 0 transposed
Cma14g01665 Cma-Chr14:12453529 Cma17g00286 Cma-Chr17:1524974 0 wgd
Cma14g01665 Cma-Chr14:12453529 Cma08g01186 Cma-Chr8:7303681 5.44E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01665 - - cmax:111480068 843.188