Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01731 ATGGGTTCGAAAGGAAAGGATATGGGGGGCACTACGATCCCAAAGGAGACACAGAAACAGGATAGAACTCCGAACTCAAAGGTGGCTGGTATGGGAAGCATTAGCAGCAAAGATATGGTATTCAGAGCAGATATGATAGATTTGAAAACCCTAGATATGCAGCTGGAGAAACACTTTAGCCGTGTTTGGTCAATGACCCAGAATCAAAGGCCAAAGGAGGAGTGGGAGATTGATTTGTCTAAGCTTGACATTCAAAAAGTTATTGCTCATGGGACTTACGGAACAGTATATAAGGGTGCATATGACAATAAAAAGGTTGCAGTGAAACTGTTGGACTGGGGGGAGGATGGTCTTGCCACTACTGCTGAAACTGCTGCTCTGCGGGCATCGTTTCGGCAAGAGGTCGCTGTTTGGCACAAGCTTGAACATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGTGCTACAAATCTTAAGATTCCTACAACGGAGGATCAAAATTCGCTTCCATCTAGGGCCTGTTGTGTTGTTGTTGAGTATATTCCTTGTGGAACATTAAAACAATTATTGATAAGGCACAAGAAAAGGAAACTTCCCTTTAAGGATGTGGTTCAGTTAGCTTTGGATCTCTCCAGAGGGCTTAGCTACCTACACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGATAGGTGCTCACAGATCTCTCAAAATTGCCGACTTTGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTTGAAGGGAAGCCATACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGGAAATTTACTGCTGCGACATGCCATACCCCAATCTTAGTTTCGTTGATGTGTCATCTGCAGTTGTTCGACAGAATCTGCGGCCCAGTATTCCGAAATGTTGCCCAAATTCTCTGGCAAATGTGATGAGGAAATGCTGGGATAGCAATCCATCCAAACGCCCTGAAATGCATGAGGTTGTGAAAATGTTGGAAGCTATTGATACAAGTAACGGAGGGGGGATGATTACTCGCGAGTACTTCTTTGGTTGCTTCTGTTTCAGGCCTTTCCACAGGCTCCGTGGTCCATAA 1167 44.56 MGSKGKDMGGTTIPKETQKQDRTPNSKVAGMGSISSKDMVFRADMIDLKTLDMQLEKHFSRVWSMTQNQRPKEEWEIDLSKLDIQKVIAHGTYGTVYKGAYDNKKVAVKLLDWGEDGLATTAETAALRASFRQEVAVWHKLEHPNVTKFVGASMGATNLKIPTTEDQNSLPSRACCVVVEYIPCGTLKQLLIRHKKRKLPFKDVVQLALDLSRGLSYLHSKKIVHRDVKTENMLIGAHRSLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFVDVSSAVVRQNLRPSIPKCCPNSLANVMRKCWDSNPSKRPEMHEVVKMLEAIDTSNGGGMITREYFFGCFCFRPFHRLRGP 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12710656 12712753 - CmaCh14G017310.1 Cma14g01731 308714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01731 388 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01731 388 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Cma14g01731 388 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Cma14g01731 388 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Cma14g01731 388 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672|GO:0006468
Cma14g01731 388 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01731 388 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 371 - -
Cma14g01731 388 CDD STKc_MAP3K-like 88 356 - -
Cma14g01731 388 Gene3D Transferase(Phosphotransferase) domain 1 182 367 - -
Cma14g01731 388 MobiDBLite consensus disorder prediction 13 31 - -
Cma14g01731 388 MobiDBLite consensus disorder prediction 1 31 - -
Cma14g01731 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Cma14g01731 388 SUPERFAMILY Protein kinase-like (PK-like) 61 356 IPR011009 -
Cma14g01731 388 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Cma14g01731 388 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 5 371 - -
Cma14g01731 388 Gene3D Phosphorylase Kinase; domain 1 71 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00131 Cma-Chr10:595793 Cma14g01731 Cma-Chr14:12710656 0 dispersed
Cma11g00103 Cma-Chr11:548654 Cma14g01731 Cma-Chr14:12710656 0 dispersed
Cma11g01426 Cma-Chr11:9401145 Cma14g01731 Cma-Chr14:12710656 0 dispersed
Cma14g01731 Cma-Chr14:12710656 Cma14g01733 Cma-Chr14:12718658 6.66E-133 dispersed
Cma14g01731 Cma-Chr14:12710656 Cma14g01732 Cma-Chr14:12712805 9.55E-86 tandem
Cma14g01731 Cma-Chr14:12710656 Cma17g01198 Cma-Chr17:8264821 7.46E-21 wgd
Cma14g01731 Cma-Chr14:12710656 Cma06g01390 Cma-Chr6:9017207 0 wgd
Cma14g01731 Cma-Chr14:12710656 Cma08g00330 Cma-Chr8:1899823 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69099 PF07714 PK_Tyr_Ser-Thr 7.00E-61 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01731 - - csv:101218975 619.002