Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01732 ATGGATTCGAAAGGAAATGATGTGGAGGTGTATGGCCTTCTTATTATGGGAAGCGATCAATATCCGCGATACATACTACAGGGGGGCTCGGAATGTCCCTGGTCCGAGGAGTGGGACATTGATTTTTCTAAACTTGATATCCAAAAAGTTGTTGCTCACGGGACTTGTAGAACTGTATTCAAGGGAACATATGACAAACAACTTGTTGCAGTGAAGATATTGGACTGTGGGGACGGCCCTGCTTTGTGCGAATTTTTTCGGCAAAGAGTTGATGTATGGCACAAGCTTCACCATCCTAATGTTACGAAATTTGTTGGGGCTTCAACAAAAGCTAGAAATCTTCAGATTCCTTCAAAACTCTCTTCAATGGATCATCAAAGCTCCATTTCACCTACGGCTTGTTGTGTTGTTATTGAGTATCTTCCTGGTGGGACATTAATAGAGTTTTTGATTAGGAACAGGAAAAGGAAACTCCCCTTCAAGGATGCCATTCAATTAGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAACAAGATTATGCATCATGATGTCAGAACTGTAAATATGTTGATAGATGCCCACAGAACCCTTAAAATTGCTGATATTGGAGCTGCTCGTGTTAAAGCTTGGAATCCAAGAGATATGAATGGAAAAACTGGTACCGTTGAATACATGGCCGAGAGAGTCAGTGTCGATTCCGAAGGCTATAATATATGCAAATCAACCCGCGCTTTTCTGTTGATCGTTACGAAGTTCGTGTGGTGCTTCGATCCGTATAGCCGGTTTTCGATTTTTGGTTGCCTTGCGATACTCTGTTCTTCCATAACCCTTTTCACGTCCAGTGGGTTTGCCGCAGCGAACCCATTGGGACGAAATCGTGTTTTTGAATTCTCTGATTTTCATGATAGCGCCAATGGCGCTTCTATGATTTTCGTCCTACTTCGTCGCCTTCGCCTCCTTACCGGCTGTTTCATGGTCGCGCTTCGTATTGGCCTTTCGGCTATCATAATTTGGGACGTTAAAGGGTTATCTCCAATAATGGGAATTATGAAAGACAACAAAATGCTGTATAGTTCTTACTTTACCGGAATGCATCATCCTTCATGCTGTTTGATCTCTCAGGTTTGA 1137 42.83 MDSKGNDVEVYGLLIMGSDQYPRYILQGGSECPWSEEWDIDFSKLDIQKVVAHGTCRTVFKGTYDKQLVAVKILDCGDGPALCEFFRQRVDVWHKLHHPNVTKFVGASTKARNLQIPSKLSSMDHQSSISPTACCVVIEYLPGGTLIEFLIRNRKRKLPFKDAIQLALDLSRGLSYLHSNKIMHHDVRTVNMLIDAHRTLKIADIGAARVKAWNPRDMNGKTGTVEYMAERVSVDSEGYNICKSTRAFLLIVTKFVWCFDPYSRFSIFGCLAILCSSITLFTSSGFAAANPLGRNRVFEFSDFHDSANGASMIFVLLRRLRLLTGCFMVALRIGLSAIIIWDVKGLSPIMGIMKDNKMLYSSYFTGMHHPSCCLISQV 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12712805 12717590 - CmaCh14G017320.1 Cma14g01732 308715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01732 378 ProSiteProfiles Protein kinase domain profile. 45 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01732 378 PANTHER KINASE-LIKE PROTEIN 35 266 - -
Cma14g01732 378 SUPERFAMILY Protein kinase-like (PK-like) 25 236 IPR011009 -
Cma14g01732 378 Gene3D Phosphorylase Kinase; domain 1 34 121 - -
Cma14g01732 378 Pfam Protein tyrosine and serine/threonine kinase 46 229 IPR001245 GO:0004672|GO:0006468
Cma14g01732 378 Gene3D Transferase(Phosphotransferase) domain 1 123 246 - -
Cma14g01732 378 ProSitePatterns Tyrosine protein kinases specific active-site signature. 182 194 IPR008266 GO:0004672|GO:0006468
Cma14g01732 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 266 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01732 Cma-Chr14:12712805 Cma10g00131 Cma-Chr10:595793 3.13E-68 dispersed
Cma14g01731 Cma-Chr14:12710656 Cma14g01732 Cma-Chr14:12712805 9.55E-86 tandem
Cma14g01732 Cma-Chr14:12712805 Cma14g01733 Cma-Chr14:12718658 2.01E-85 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69100 PF07714 PK_Tyr_Ser-Thr 5.60E-25 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01732 - - cmax:111479256 477.633