Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01733 ATGGATTCGAAAGTAAATGACGTGAAGGAGGGTACTACAATCCCTGAAGAGACGCAGAGCCCGGATACCACGGGAAGCTGGAAACGGGTGCTACCACAAAAAAGGTCGGAGGAGGGGAAATATGGAGACATACCACGTTCGCGCTGGTCATGTTGTTGGTCGAAGGAGTGGGAAGATGTGGAACACATTGGTCTAAGTTTTGGCCCGACGAAGGGGAGCAAAGAATGCCCTTGGACGGAGGAGTGGAAGATTGATTTTTCTAAACTCGTATCCAGAAAGTTGTTGCTCACGGGACTTATAGAACTGTATTCAGAGGAACATATGACAACCAAGATGTCGCAGGTAAACATCCTTTTCGCTTTTGATTTTGCTTCTGCTGCTTACATTCCGACAGCTGAACCCTACTTTTTCCATATTACAGTGAAGATATTGGAGTGGGGGGATGGCCCTGTTTTGAGGGAATCATTTCGGCAAAAAGTTGATGCTTGGCACAAGCTTCACCATCCTAATGTTACGGAATTTGTTGGGGCTTCAACAAAAGCTATAAGTCTTCAGATTCCTTCAAAATCAAAAGTCTCTTCAACGAATCATCAAAACTCCATTTTACCTACGGCTTGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAAGAGTTGTTGATGAGGTGCAAGAACAGGAAACTTCCCTTTAAGGATGTGATTCAATTGGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAAGAACATTGTGCATCAAGATGTCAAACCTGAAAATATGTTGATAGATGCTCACAGAACTCTTAAAATTGCTGATATTGGGGTTGCACATGTTAAAGCTCGGAATCCAAATGATATGACTGGGGAATTTACTAGTACTCTCGAATACGTTGCCCCAGAGGTTATTGAAGGGAAGCCATACAATAAAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGAAAATTTACAGTTGCGATATACCATACCCCGATCTTCGCTCTGCTGACAATCTGCGACCCGATATCCCCGAATGCTGTCCTAATTCTCTGGCAAAAGTGATGAGGAAGTGCTGGGATAGAAATCCATCCAAACGCCCTGAAATGCATAAGGTTGTCGAAATGTTGGAAGCCATTGAAAAAAGTAAAGGAGAGGGGATGGTTTCTCCTAACAAAGTTTCTTGCAGCTTCTGTTTCAGCCCTTTTGGCACGCCCAGTGGTCCTTAA 1239 43.74 MDSKVNDVKEGTTIPEETQSPDTTGSWKRVLPQKRSEEGKYGDIPRSRWSCCWSKEWEDVEHIGLSFGPTKGSKECPWTEEWKIDFSKLVSRKLLLTGLIELYSEEHMTTKMSQVNILFAFDFASAAYIPTAEPYFFHITVKILEWGDGPVLRESFRQKVDAWHKLHHPNVTEFVGASTKAISLQIPSKSKVSSTNHQNSILPTACCVVVEYLPGGTLKELLMRCKNRKLPFKDVIQLALDLSRGLSYLHSKNIVHQDVKPENMLIDAHRTLKIADIGVAHVKARNPNDMTGEFTSTLEYVAPEVIEGKPYNKRCDVYSFGICLWKIYSCDIPYPDLRSADNLRPDIPECCPNSLAKVMRKCWDRNPSKRPEMHKVVEMLEAIEKSKGEGMVSPNKVSCSFCFSPFGTPSGP 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12718658 12721504 - CmaCh14G017330.1 Cma14g01733 308716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01733 412 Gene3D Transferase(Phosphotransferase) domain 1 133 387 - -
Cma14g01733 412 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 399 - -
Cma14g01733 412 MobiDBLite consensus disorder prediction 1 32 - -
Cma14g01733 412 PANTHER KINASE-LIKE PROTEIN 139 399 - -
Cma14g01733 412 ProSiteProfiles Protein kinase domain profile. 112 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01733 412 Pfam Protein tyrosine and serine/threonine kinase 138 380 IPR001245 GO:0004672|GO:0006468
Cma14g01733 412 CDD STKc_MAP3K-like 141 380 - -
Cma14g01733 412 SUPERFAMILY Protein kinase-like (PK-like) 130 386 IPR011009 -
Cma14g01733 412 PRINTS Tyrosine kinase catalytic domain signature 351 373 IPR001245 GO:0004672|GO:0006468
Cma14g01733 412 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Cma14g01733 412 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Cma14g01733 412 MobiDBLite consensus disorder prediction 12 30 - -
Cma14g01733 412 SMART serkin_6 135 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01733 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01390 Cma14g01733 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01731 Cma-Chr14:12710656 Cma14g01733 Cma-Chr14:12718658 6.66E-133 dispersed
Cma14g01733 Cma-Chr14:12718658 Cma13g00640 Cma-Chr13:6076993 1.03E-49 dispersed
Cma14g01732 Cma-Chr14:12712805 Cma14g01733 Cma-Chr14:12718658 2.01E-85 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69101 PF07714 PK_Tyr_Ser-Thr 3.20E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01733 - - cmos:111457468 557.37