Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01741 ATGGGTAATGAAGAGATTGAAAGCCCTCGCCGTGTGGCCATTCCTCCGACCAAGCCGTTCTTGGTGTCCTTAGGCGCCAACCTCAAAGAAACCTTCTTCCCCGATGACCCTTTCAAACAGTTCAAAAACCAGCCTTTCGGAGCCCAGATTCTTCTCTGGCTTAAATACTTCATTCCCTTCCTCGAATGGGCTCCTCGCTACACCTTCAATTTCTTCAAAGCCGACCTCGTTGCCGGCATCACCATCGCCAGTTTGGCCGTCCCTCAGGGCATCAGCTATGCCAATCTTGCCACCATCCCCCCCATCATTGGCCTTTATTCCAGCTTCGTGCCGCCATTGATATACGCCATGCTTGGAAGCTCCAAAGATTTGGCGGTGGGGACTGTGGCGGTCGTGTCACTTCTCATGTCCGCCCTATTGGGGAAGGAAGTCAGCCCGGTGGAGCATCCGAAGGAATACGTGCAATTGGTTTTCACTGCCACATTCTTCGCCGGAGCTTTTCAGGCCTCTCTCGGTTTTGTCAGACTAGGGGTTATTGTGGACTTTCTGTCGCATGCAGCGATTGTGGGGTTCATGGGTGGTGCGGCGACGGTGGTTTGTCTTCAGCAGCTAAAAGGCATAATGGGATTGGTTCATTTCACGCATGAGACTGATGTCGTATCCGTCACGCGCTCTCTTTTCTCCCAAATTCATCAGTGGAGATGGCAAAGTGTAGTGTTGGGTTGCAGTTTTCTCTCCTTTCTCCTCCTCACCAGATACTTGATCAAGAAGAAACCAATCTTCTTTTGGATAAATGCATTGGCGCCTTTGCTTTCCATCATCTTGGGAAGTCTTCTCGTCTACTTCACCCACGCTGAACGCCATGGAGTTCAAGTGATTGGGATTTTGAAGAAAGGGTTGAATCCCTTATCTGTATCTGATTTAGTATTTGGGCCCCCTCATCTTCCCATTGCCATCAAAACAGGGATCATCATCGGAATCATAGGGCTCGCTGAAGGAGTTGCCGTGGGGAGAAGTTTTGCTACACTTAAGAACTACCACATTGATGGAAACAAGGAAATGATTGCATTTGGGATGATGAATATTGTTGGTTCTTGCACTTCTTGCTACCTTACCGCAGGGCCATTTTCGAGGACTGCAGTGAATTTCAATGCAGGATGTAAAACTGCAGTCTCCAATATTGTCATGGCAATGTCTTTGATGATCACTCTGTTGTTTTTGACGCCATTTTTTCGTTACACACCCCTTGCGGTGCTTTCCTCCATAATCATCACGGCTGTGATTGGCCTAATCAACTATGAAGAGGTTGTCCACCTTTGGAAAATCGACAAATTCGACTTTGTCGTCTGCGTCGGTGCATACATCGGTGTCGTATTTGGCAGTATTGAAACAGGCTTGATCATTGCAATTACAATCTCTTTGTTAAGGGTGCTTCTCGTCACCGCAAGGCCAAGAACTTCAGTATTAGGCAACATTCCCAACTCCACAATTTACAGAAGCATTGATCAATACCCAACAGCCAACCGTGTGCCTGGAGCTCTCATCCTTCAATTGGAGGCCCCAATCTATTTTGCCAACTCAAACTACGTGAGAGAGAGGCTTTCAAGGTGGATCACAGACGAAGAAAAAAGGATAAAATCATCGGGCCTAACCAGCTTGCAGTACATAATTCTAGACGTTTCCGGCGTAAGCAGCATTGACTCAAGTGGGATCAGCATGCTTGAAGAGGTTAACAAGAGTACTGAAAAAAGGGGTCTCATACTTTTGCTTGCAAATCCAAGAAGCGAAGTGATCAAAAAATTAAACGTGTCGAAGTTCATCGAGGCGATCGGACATGAACGGTTCTATCTCACGGTGGGAGAGGCTGTAACAGCCTGCAATCTCAAGCTCCACACCTGCAAGCCAAATCCTGTTGGTGCTGAATTAGACTCAACTGTGTAG 1941 47.4 MGNEEIESPRRVAIPPTKPFLVSLGANLKETFFPDDPFKQFKNQPFGAQILLWLKYFIPFLEWAPRYTFNFFKADLVAGITIASLAVPQGISYANLATIPPIIGLYSSFVPPLIYAMLGSSKDLAVGTVAVVSLLMSALLGKEVSPVEHPKEYVQLVFTATFFAGAFQASLGFVRLGVIVDFLSHAAIVGFMGGAATVVCLQQLKGIMGLVHFTHETDVVSVTRSLFSQIHQWRWQSVVLGCSFLSFLLLTRYLIKKKPIFFWINALAPLLSIILGSLLVYFTHAERHGVQVIGILKKGLNPLSVSDLVFGPPHLPIAIKTGIIIGIIGLAEGVAVGRSFATLKNYHIDGNKEMIAFGMMNIVGSCTSCYLTAGPFSRTAVNFNAGCKTAVSNIVMAMSLMITLLFLTPFFRYTPLAVLSSIIITAVIGLINYEEVVHLWKIDKFDFVVCVGAYIGVVFGSIETGLIIAITISLLRVLLVTARPRTSVLGNIPNSTIYRSIDQYPTANRVPGALILQLEAPIYFANSNYVRERLSRWITDEEKRIKSSGLTSLQYIILDVSGVSSIDSSGISMLEEVNKSTEKRGLILLLANPRSEVIKKLNVSKFIEAIGHERFYLTVGEAVTACNLKLHTCKPNPVGAELDSTV 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12745410 12750127 - CmaCh14G017410.1 Cma14g01741 308724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01741 646 Pfam Sulfate permease family 72 451 IPR011547 GO:0016021
Cma14g01741 646 PANTHER BNAA04G05880D PROTEIN 4 640 IPR030311 GO:0008272|GO:0009507|GO:0015116
Cma14g01741 646 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Cma14g01741 646 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Cma14g01741 646 Gene3D STAS domain 483 629 IPR036513 -
Cma14g01741 646 TIGRFAM sulP: sulfate permease 59 622 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cma14g01741 646 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Cma14g01741 646 SUPERFAMILY SpoIIaa-like 506 626 IPR036513 -
Cma14g01741 646 PANTHER SULFATE TRANSPORTER 4 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cma14g01741 646 Pfam STAS domain 504 622 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00603 Cma-Chr10:2788367 Cma14g01741 Cma-Chr14:12745410 0 dispersed
Cma11g00593 Cma-Chr11:2835420 Cma14g01741 Cma-Chr14:12745410 0 dispersed
Cma14g01741 Cma-Chr14:12745410 Cma15g00724 Cma-Chr15:3515599 0 dispersed
Cma14g01741 Cma-Chr14:12745410 Cma17g01201 Cma-Chr17:8290197 0 wgd
Cma14g01741 Cma-Chr14:12745410 Cma06g01377 Cma-Chr6:8979400 0 wgd
Cma14g01741 Cma-Chr14:12745410 Cma08g00327 Cma-Chr8:1868717 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01741 K17471 - csv:101203205 1065.83