Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01755 ATGCCAGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTGCAGAACTCTGTTCAAAAACCTCAAAAATCAACCCAAAATGGCAAAGGCCCGCCGAATCTGGAACATCAAACCATCAAATGTCGAAACCCATCTTCTCCTCCGAGCAAAAACAGAGGCAGGAGAAGAAGCAGAGGCGGCCGGAAATCCGATCAGGGGGAGGTTTACATGAGACCCAGTTCTCGGCCCTGCACAGTGGCGCGTAAACCAGATGAACCGGAATTTAACACCGGAGCTCTGGTGGCGAGTACTAATCCAAATGGTGGTAACATTTGTGGAATGGAAATGGGTTATCGAAATTCAAGCAAGTCTTTGAGTTTTGCCCCAAGGCCTGGATTCGGACAAGTTGGGACAAAATGTATTGTGAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTCACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGATTCTGAGCTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTATGGAAAGAGTTTAACATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTGGTTCTTAGGTTTGTTGCTCGTGCAAATTTACACCATTTGGGTCAGTTTCTGGCGGGTAAGCGTGCCGATGCTCCACAAGAAGCTCTTCAAATACTGGATATTGTATTGAGGGAGTTGTCATCCAAAAGGTACTGTCCTATAGGGAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTAGAGTCATGGTGTGGGTTTTACCAAAGTATAAGACCCACTCAAATGGGACTGTCTCTTAACATTGATATGGCTTCAGCTGCATTCATTGAGCCTCTCCCTGTCCTTGAGTTCGTTGCTCAGCTACTAGGGAAAGATGTATTGTCCCGGCCATTGTCTGACGCTGATCGAGTAAAGATTAAAAAGGCTCTTAGGGGGGTGAAAGTTGAAGTAACACACCGGGGAAATGTAAGGCGGAAATATCGAGTTTCGGGTCTGACATCACAACCCACACGAGAATTAGTATTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAAGAGATGTATGGCTTCACCATTCAACACGCACATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTGCCAATGGAGGCCTGCAAAATTGTTGGGGGGCAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTTACGTGTCAGAGACCGAGGGATCGAGAAAATGACATTTTACAGACTGTTCAACATAATGCTTATGATATGGATCCTTATGCCAAGGAGTTTGGGATTAAAATCAGTGAAAAGCTGGCTTCTGTTGAAGCTAGAATCCTCCCTCCTCCCTGGCTCAAATATCATGATACTGGCAAAGAGAAGGATTGCTTGCCTCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAATCGGTGGGCGTGCATCAACTTCTCTAGGAGTGTACAAGAAAATGTTGCTCGTGGGTTTTGTACCGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCTGTTTTTCCAATATACAATGCCAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGGAAAGAGTTAGAGCTCTTATTAGCTATTTTACCTGACAATAACGGATCACTTTACGGTGACCTTAAGCGAATTTGTGAAACCGATCTTGGTTTAATATCACAATGTTGTCTTACGAAACATGTGTTCAAGATTAGTAAGCAGTACCTTGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATCAGCTGCAGGATACCGCTTGTAGTAGCCTCCCAGGATTGGCCTGAAGTGACTAAATATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGATTTGTACAAAACTTGGCAGGATCCTGTCCGTGGTACTGTCAGTGGTGGCATGATCAGGGATCTTCTGGTTTCCTTTAGGAAAGCAACAGGGCAGAAGCCTCTCAGAATAATATTTTACAGGGATGGCGTAAGTGAAGGACAATTCTACCAAGTATTACTTTATGAGTTGGATGCAATCAGGAAGGCATGTGCTTCTTTAGAACCGAATTACCAACCACCCGTAACGTTCATTGTTGTCCAAAAACGACACCACACACGATTGTTTGCCAACAACTATCGGGATAGAAGTAGCACAGACAAGAGTGGGAACATTTTACCTGGCACCGTAGTTGACTCCAAAATATGTCACCCAACAGAATTTGATTTCTATCTCTGTAGCCATGCTGGAATTCAGGGGACAAGTCGGCCAGCACACTATCATGTTCTTTGGGATGAAAACAATTTTACTCCTGATGGAATTCAGTCATTAACGAACAATCTTTGCTACACGTATGCAAGGTGTACACGTTCGGTTTCTGTTGTTGCCAGTTTTGGCATTCATGTAGTTCCTCCAGCATACTATGCACATTTAGCTGCATTCCGAGCTCGATTCTACATGGAGCCAGAGATGCAGGAGAATGGCTCAGCTGGTCGTTCTGCCAAGAGCACACGCGCTACTGGAGAGTCTGGGGTTCGACCTTTGCCAGCTCTGAAGGAAAATGTGAAAAGAGTAATGTTTTACTGCTAG 2895 43.66 MPVRQMKESSEQHLVIKTHLQNSVQKPQKSTQNGKGPPNLEHQTIKCRNPSSPPSKNRGRRRSRGGRKSDQGEVYMRPSSRPCTVARKPDEPEFNTGALVASTNPNGGNICGMEMGYRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRDSELGKRLPAYDGRKSLYTAGELPFVWKEFNIKLVDEEDGVSGPKREREYKVVLRFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDMDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQENVARGFCTELAQMCQVSGMEFNPEPVFPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTPDGIQSLTNNLCYTYARCTRSVSVVASFGIHVVPPAYYAHLAAFRARFYMEPEMQENGSAGRSAKSTRATGESGVRPLPALKENVKRVMFYC 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12799089 12804524 - CmaCh14G017550.1 Cma14g01755 308738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01755 964 CDD PAZ_argonaute_like 333 447 - -
Cma14g01755 964 Pfam PAZ domain 360 464 IPR003100 GO:0005515
Cma14g01755 964 SUPERFAMILY Ribonuclease H-like 610 923 IPR012337 -
Cma14g01755 964 SMART DUF1785_2 281 333 IPR014811 -
Cma14g01755 964 Gene3D paz domain 327 452 - -
Cma14g01755 964 Pfam Mid domain of argonaute 531 608 IPR032473 -
Cma14g01755 964 ProSiteProfiles Piwi domain profile. 622 923 IPR003165 GO:0003676
Cma14g01755 964 SMART Piwi_a_2 622 923 IPR003165 GO:0003676
Cma14g01755 964 MobiDBLite consensus disorder prediction 15 54 - -
Cma14g01755 964 ProSiteProfiles PAZ domain profile. 334 448 IPR003100 GO:0005515
Cma14g01755 964 Pfam N-terminal domain of argonaute 138 272 IPR032474 -
Cma14g01755 964 SUPERFAMILY PAZ domain 328 488 IPR036085 GO:0005515
Cma14g01755 964 Pfam Piwi domain 623 692 IPR003165 GO:0003676
Cma14g01755 964 Pfam Piwi domain 695 922 IPR003165 GO:0003676
Cma14g01755 964 Gene3D - 512 685 - -
Cma14g01755 964 PANTHER PROTEIN ARGONAUTE 10 57 963 - -
Cma14g01755 964 CDD Piwi_ago-like 492 922 IPR045246 -
Cma14g01755 964 Gene3D - 686 964 IPR036397 GO:0003676
Cma14g01755 964 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 963 - -
Cma14g01755 964 SMART PAZ_2_a_3 338 470 IPR003100 GO:0005515
Cma14g01755 964 MobiDBLite consensus disorder prediction 1 91 - -
Cma14g01755 964 Pfam Argonaute linker 1 domain 282 331 IPR014811 -
Cma14g01755 964 Pfam Argonaute linker 2 domain 474 520 IPR032472 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01363 Cma14g01755 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00767 Cma-Chr1:4130153 Cma14g01755 Cma-Chr14:12799089 0 dispersed
Cma13g00269 Cma-Chr13:2215423 Cma14g01755 Cma-Chr14:12799089 0 dispersed
Cma13g01111 Cma-Chr13:8310637 Cma14g01755 Cma-Chr14:12799089 0 dispersed
Cma14g01755 Cma-Chr14:12799089 Cma18g01126 Cma-Chr18:9136002 0 dispersed
Cma11g00580 Cma-Chr11:2789527 Cma14g01755 Cma-Chr14:12799089 0 transposed
Cma14g01755 Cma-Chr14:12799089 Cma06g01363 Cma-Chr6:8906984 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01755 K11593 - csv:101221352 1847.4