Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01789 ATGGAATCCTCTGCAATTACTCTCATCATGGTTCAAGGACCTCGCGAGGGCGAAACCCTACATTTTCCACCCGGAACGACGATTCGGATCGGTCGCGTTGTTCGGGGTAATTCCGTCGCCATCAAAGACGTTGGCATCTCCACCAAGCACCTCTCTATCGAATCCGAGTCCGTATCAGGCAAGTGGATGATTCGGGACCTCGATTCTTCAAATGGTACCTTTGTTAACGATACCAAGCTTTCTCCACACGATGCCGTCGCTCTAAGCGACGGCGACACCATTAAATGCGGCGAGTTGACCTCGATTTTGGTCAGAATAAACAGTAATGAAGATTGTCGGTCGAGGCGAAACCCTAGGCGGAAAGCTGCGGAGAAGTGTACAGGTTCCAATGTCGTGGGATCAGTTGCAGGAACTCGGGGTCGAAGAGGAAAGGCTGTGGAAGAGGTAAGCATACTTGGGGTTTTTAATGAGGCGACGTTAGAGAGTGGAAGATGTTTAAGGCCGAGGAAGGGGAGGGGTGTGAAATGTGAAATTACTAACCAAGTAGCGGATTGCAAGAAAATTGAGAAGAATTTAGATTTCGTAAGAGGGTCAGAGAATGTGAACAATGTGGAAAATGAACCCAGCACAAAAATTACTAGAGGAAGTACCATGAAAGCGAACAGCACTGTACGTGTGGCCACAGATTCTGTTCTTGGGAATGTTCCGGAGAACCCATGTCTGGGTGGTGAACTAAAGGCTGGGGAAAAAAGGACGAGAGCGGGAACTAGGGGAAGGAAGAAATTGCAAAATGAGCCACCACCCGATTGTGGTACAGTTATAAAATTGGAACATAGTGAAAGCGTCGAGCAGAAGAGCTTAGGAGAAAATAAACTGGTTGTCGATGGAGAAGGTAAGAACAATGCGCATGTTGAAGAAGCCGGCAGTGGGTCTAGCCCTCAAGTGGTCTGTGATCGAGATGAAAACGAAGATGTGTGTATTATTTCAGAAGGTTGCGAAAAGGTTGCTGATGGGAGAGATTCACATGGTGAGGACATCCTTCGTAAGGTCGAGGAGGCGCCAGATTTGAAGAAGATGACACTTGGGGAGTGGTTTGATTACTTGGAGACTCACTTGCCTAGACAAATTATTGATGCGACTGAAGAGTCCGGCGAGCTCATCATGAAGTTTCCCGACGATCAAGACGAATCCAAGAGGCCCCAATTCCCTCTCGATTCTAGCTGTTACAAAATCATCGATGAAATTGGGGTCGGCGTTAGCGCCGTCGTTTACAAAGCCATTTGCATTCCCATGAACTCTGCAGTGGTGGCCATCAAAGCCATTGACCTCGATCGATCACGAGCCGATTTCGATGACATTCGAAGAGAAGCCAAAATTCTGTCACTTCTCTCTCATCCAAACATTCTTAACGCCCACTGTTCGTTCACAGTTGATCGTCGCCTTTGGGTCGTGATGCCGTTCATGTCTGCCGGATCTTTACAGTCCATTATTACGTCGTCGTTTCCAGATGGCTTGCCAGAGCCCTGCATCGCTGTCGTTCTCCGGGAAATTCTACACGCTCTGACTTACCTCCACGACCAAGGCCACCTCCACCGAGACATTAAAGCCGGAAACATTCTGATGGACTCAAATGGGTCCGTCAAGCTAGCTGATTTCGGAGTTTCGGCATCCATTTTCGAGGCCAATTCCACACAGGGGGTGCCAATTTCTCCATCATCGACGTCGATGATGCTGAAGGAAATCGCGGGAACGCCATATTGGATGGCGCCGGAGGTGATTCACTCGCACAATGGGTATAGTTTGAAAGCGGATATATGGTCATTTGGAATCACGGCGTTGGAATTAGCCCACGGACGACCTCCCCTTTCTCATCTCCCACCTTCCAAGTCCCTCCTCCTGAAAATCACGCGAAGGTTTCGATTCTCGGATTACGAGAATCAACAAAACAGCAATAACAAGAACAAATTTTCAAAAGGGTTCAAGGAATTAGTAGCCTCATGCCTTGATCAGGAGCCATCGAGAAGACCATGCGCCGATAAATTGCTCAAACATCCCTTTTTCAGGAACTGCAAGGGCCCTGATCTTCTCATAAAGACTGTATTACAAGGTTTGCCGAGTGTTGAAGAGAGATTCAAATTGGGAAAATTGCAGCGATTACCATCGATGAAAATGGAGGAAGAAGATGAAGAGGAAATAGAGAAGGAAATTATAAAACAGAGGAGGATCAGCGGGTGGAATTTCAAGGAGGATGGGCTAGAGCTGGAGCCTGTTTTTCCAGGGGAAAACTGCGAGGAAGATGAATGTTCGATTATAAAACAGGTCCGATTCGGAGGGGAATCGATCATGGAGAAGGGTTCGAGGGATTCGAGTGAGTGCTGTTCGGGGGTATCGGATCTGAGTTCACCAACGGGGAACGGGAGGAGAGGCGGAGGGGAGGCGGAGGAGGAAGCTGTTGACAGGGAGTCGATAATGGGTGGATTGGTGGCGCTGAAAAGGAGCTTGGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATAGAAGGGGAGAAAGGGGGAGAGATGAGCAGAGAGGAGCAGATAGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGCGGAAGAGGAACTTCGAATTGGAGATGGAGTTGGAATTTCTTGGGCTTCAGATCTCCGCTGCCCATAACACTGGCGCTGCTTAA 2712 48.67 MESSAITLIMVQGPREGETLHFPPGTTIRIGRVVRGNSVAIKDVGISTKHLSIESESVSGKWMIRDLDSSNGTFVNDTKLSPHDAVALSDGDTIKCGELTSILVRINSNEDCRSRRNPRRKAAEKCTGSNVVGSVAGTRGRRGKAVEEVSILGVFNEATLESGRCLRPRKGRGVKCEITNQVADCKKIEKNLDFVRGSENVNNVENEPSTKITRGSTMKANSTVRVATDSVLGNVPENPCLGGELKAGEKRTRAGTRGRKKLQNEPPPDCGTVIKLEHSESVEQKSLGENKLVVDGEGKNNAHVEEAGSGSSPQVVCDRDENEDVCIISEGCEKVADGRDSHGEDILRKVEEAPDLKKMTLGEWFDYLETHLPRQIIDATEESGELIMKFPDDQDESKRPQFPLDSSCYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILHALTYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANSTQGVPISPSSTSMMLKEIAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENQQNSNNKNKFSKGFKELVASCLDQEPSRRPCADKLLKHPFFRNCKGPDLLIKTVLQGLPSVEERFKLGKLQRLPSMKMEEEDEEEIEKEIIKQRRISGWNFKEDGLELEPVFPGENCEEDECSIIKQVRFGGESIMEKGSRDSSECCSGVSDLSSPTGNGRRGGGEAEEEAVDRESIMGGLVALKRSLDEQRRAVGSLIELIEGEKGGEMSREEQIGRLMEKMTRELENERKRNFELEMELEFLGLQISAAHNTGAA 903
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12922071 12926435 + CmaCh14G017890.1 Cma14g01789 308772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01789 903 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 393 900 - -
Cma14g01789 903 SMART FHA_2 27 80 IPR000253 GO:0005515
Cma14g01789 903 ProSiteProfiles Protein kinase domain profile. 409 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01789 903 Pfam FHA domain 29 96 IPR000253 GO:0005515
Cma14g01789 903 Gene3D Phosphorylase Kinase; domain 1 398 487 - -
Cma14g01789 903 ProSiteProfiles Forkhead-associated (FHA) domain profile. 28 80 IPR000253 GO:0005515
Cma14g01789 903 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 393 900 - -
Cma14g01789 903 CDD FHA 6 108 IPR000253 GO:0005515
Cma14g01789 903 MobiDBLite consensus disorder prediction 242 271 - -
Cma14g01789 903 MobiDBLite consensus disorder prediction 786 818 - -
Cma14g01789 903 SUPERFAMILY Protein kinase-like (PK-like) 408 704 IPR011009 -
Cma14g01789 903 MobiDBLite consensus disorder prediction 244 264 - -
Cma14g01789 903 Gene3D - 1 112 - -
Cma14g01789 903 Gene3D Transferase(Phosphotransferase) domain 1 491 737 - -
Cma14g01789 903 ProSitePatterns Protein kinases ATP-binding region signature. 415 439 IPR017441 GO:0005524
Cma14g01789 903 SUPERFAMILY SMAD/FHA domain 5 104 IPR008984 GO:0005515
Cma14g01789 903 Pfam Protein kinase domain 409 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01789 903 MobiDBLite consensus disorder prediction 790 804 - -
Cma14g01789 903 SMART serkin_6 409 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01789 903 Coils Coil 859 886 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01180 Cma-Chr2:6992872 Cma14g01789 Cma-Chr14:12922071 3.34E-06 dispersed
Cma14g01789 Cma-Chr14:12922071 Cma15g00341 Cma-Chr15:1575235 3.52E-105 dispersed
Cma14g01789 Cma-Chr14:12922071 Cma04g02707 Cma-Chr4:18283235 2.23E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69104 PF00069 Pkinase 2.50E-58 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01789 K08835 - csv:101215648 817.764