Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01795 ATGAAACCGGCAGCGGAGGCATGGCCGGAGACAGCGGCGATGGTGGGCATGGGGAGAGAGAGAAGAGCGGCGGCGACTTGCTTGAAGATGTGGACGAGGTGGAGTATGCGGTCTGTAGCGGCGGATTTGGAGGCGGCGGTTAGGGCCCAAGGAAGGTCGAAGCCGTTGGAGAAGAAGCGGCCATGGGAAGTGGTGAGGAGGACTGAACCGCGAGTGGCTTGGGACTTGACTTGGGCGAGAAGAGAGAGGAAGGAGGAAATGAAGGTGGGGCCGATCCAGTGCTCGTTGTCGCCGGTGAGGGTCAGTATGAAGACACCGCCACGCTTCTCTAGAGTGCACATGTCGTTTGATGCAAATGACAAAAAAAAAAAAAAGGTGGTTCGGAGAGAAGAAACGCCGCCGGGTCGCGACCCGACACGGCTGCAGAGCCAGGCTCCGGCGTCCATTGTGATAAACCGGGCGTCGAATTGGAATGTGGCTATACCGTTGTTGACCCCTCTTGTATCAGCTTCGCCTTGTGGTAATTCAAGCCAAGATGTGTTGTTGATGGCTGAGAATAAGGCGAGGGAGGAGACCAAAGGGCTAACCGTTACCAAGTGGCAGCACCCGGCGTCTCCGTTGTATTATGGGCCACACCCAATGGGCACCCCCTTTGTGCCGAGTAAGAAAAAGAAAAAGGATATTGGAGTGAAAGCCCAAAATTTGCACAATATTATAATTCTGGTATCCACTCCAATTCAATTAGTGGTTCCCATCTCTGGTCTGGCGAATCCTTGGTGGACAACCCAGGTGGGGCTGTCGGGAGTGGATCATCATCACCCCACAGCAATCAACTCGCCCATTTTCAAACAAACCGATGAAAACAGCGGCGGTGGAAGCGGCAGCCGAGATGACGACGACGACAACAACAACCGTGACGAGCCTACAGAAGGGGCCGTCGAGGCTGGAACTCGAAGGCCAAGAGGCCGACCACCTGGATCTAAGAACAAACCCAAACCTCCTATCTTCATCACTCGTGACAGTCCCAACGCCCTTAGAAGCTACGTTCTAGAGGTCGCTGCGGGATCTGACGTGGCCGATTCCATCGCCCAATTCGCCCGTAAGCGCCAGCGTGGCGTCTGTGTTCTCAGTGCAACCGGTTTGGTTGCTAACGTCACTTTGCGTCAGCCCGCTGCCCCTGGCTCCGTAATGCCACTCCAAGGAAGGTTCGAGATTCTCTCTTTAACCGGCGCGTTTTTACCAGGACCGGCCCCACCCGGGTCCACTGGCCTGACCGTTTACTTGTCCGGCGGTCAAGGGCAGGTTGTCGGCGGTAGCGTCGTTGGGTCGCTTGTAGCTGCTGGACCCATTATGGTAATTGCTGCTACTTTTGCTAATGCGACATATGAAAGGTTGCCTCTTGAAGATCCCGACGATCATGAAGTTGGCAGTGGCTCCGCTTCACACGGCGGTGGTAGAAGCCCACCGCCGGAAATTAGAGGCAGTGGAGGAGGGCAGATGGGGAGTGGGATGCCGGAACCGACTTTGCCGCTCTATAATTTACTTCCGGATATGATGCCCAACGGAGTTCAGCTTGGGCACGACGGGTACGCTTATGTTCGGCCACCATATTGA 1614 55.51 MKPAAEAWPETAAMVGMGRERRAAATCLKMWTRWSMRSVAADLEAAVRAQGRSKPLEKKRPWEVVRRTEPRVAWDLTWARRERKEEMKVGPIQCSLSPVRVSMKTPPRFSRVHMSFDANDKKKKKVVRREETPPGRDPTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQDVLLMAENKAREETKGLTVTKWQHPASPLYYGPHPMGTPFVPSKKKKKDIGVKAQNLHNIIILVSTPIQLVVPISGLANPWWTTQVGLSGVDHHHPTAINSPIFKQTDENSGGGSGSRDDDDDNNNRDEPTEGAVEAGTRRPRGRPPGSKNKPKPPIFITRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDPDDHEVGSGSASHGGGRSPPPEIRGSGGGQMGSGMPEPTLPLYNLLPDMMPNGVQLGHDGYAYVRPPY 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12942583 12945952 - CmaCh14G017950.1 Cma14g01795 308778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01795 537 CDD DUF296 346 428 IPR005175 -
Cma14g01795 537 ProSiteProfiles PPC domain profile profile. 342 483 IPR005175 -
Cma14g01795 537 MobiDBLite consensus disorder prediction 292 317 - -
Cma14g01795 537 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 290 537 IPR014476 GO:0003680
Cma14g01795 537 Pfam Plants and Prokaryotes Conserved (PCC) domain 346 458 IPR005175 -
Cma14g01795 537 MobiDBLite consensus disorder prediction 120 136 - -
Cma14g01795 537 Gene3D - 345 473 - -
Cma14g01795 537 MobiDBLite consensus disorder prediction 120 141 - -
Cma14g01795 537 MobiDBLite consensus disorder prediction 468 509 - -
Cma14g01795 537 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 290 537 - -
Cma14g01795 537 SUPERFAMILY AF0104/ALDC/Ptd012-like 343 470 - -
Cma14g01795 537 MobiDBLite consensus disorder prediction 271 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g01143 Cma-Chr12:9003109 Cma14g01795 Cma-Chr14:12942583 1.72E-80 dispersed
Cma14g01795 Cma-Chr14:12942583 Cma15g00103 Cma-Chr15:479122 3.82E-66 dispersed
Cma14g01795 Cma-Chr14:12942583 Cma14g01798 Cma-Chr14:12949568 2.96E-19 proximal
Cma14g01795 Cma-Chr14:12942583 Cma17g00174 Cma-Chr17:899884 5.86E-14 wgd
Cma14g01795 Cma-Chr14:12942583 Cma05g01227 Cma-Chr5:9430823 2.60E-78 wgd
Cma14g01795 Cma-Chr14:12942583 Cma06g01339 Cma-Chr6:8796348 5.80E-165 wgd
Cma14g01795 Cma-Chr14:12942583 Cma08g01094 Cma-Chr8:6817415 1.57E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01795 - - cpep:111790297 593.578