Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g01810 | ATGGATTACGCCGGATTCTTCTCCTCCATTTCCGACTTCTCCTCCGAAGCTTCCTTCGGCTCACCGGAATCCTGTAATTTGCTTCCTTTCAATGAGAATGACTCAGAGGAAATGGTTCTGTTTGGGCTGATCTCCGAGGCCACACGGGGATCCTCCGACCCCAGTATCGGAGCGGTGCGAGTGAAGGAAGAGGAGGTCGATTCTGTCGGCGAAGAAAGCCGGAAGAAGGAAAGGCCTTATAGGGGGGTTCGCCGCCGGCCATGGGGTAAATTCGCGGCGGAAATTAGAGATTCCACTAGACATGGGATAAGGGTATGGTTGGGGACTTTTGACAGTGCGGAAGCCGCCGCTTTGGCCTACGATCAAGCCGCGTTTTCGATGAGGGGTGCTGCCGCAATTCTAAATTTCCCCGTGGACAGAGTAAGGGAGTCTCTTAAAGAAATGAACTTCAGCGGAGGCGACCCTACTGATAGCATCACCGACGGCGGAGGCTCTCCGGTGATAGCGTTGAAAAGAAAACACTCGATCAGAAGGAAAGCCATTAGCAAAAAGAACAAAGAGAGGGATTTACGGATCCAAAATGTGATGGTTTTGGAAGATTTAGGCGCAGAGGTGGGAAAAAGACTTTTCTCTACGGTTGAAGTTTTATTCTCTGTAGTACCTTATACATATAAGTTAAAAATGTCAATGACTAAAGAGAGAGAGATTAAAATAGTCAGGATTGAATTGGATTGTGAAGGGTTGAAATTGAGAACCAATTACAAAATGGCTCAAGAATTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACTCAATGGTACCATTTCACAGCCATCATCATAGCGGGAATGGGGTTCTTCACGGATGCCTATGATCTTTTCTGCATTGCCGTGGTTTCGAAGTTGCTTGGTCGGATATACTACTACACGCCAGGCTCTGCTCGACCTGGCTCGCTTCCTCCTAATGTCTCGGCCGCGGTTAGCGGGGTCGCGCTCTGTGGAACTCTGGCCGGGCAGCTGTTCTTCGGGTGGCTTGGTGACAAGTTGGGTAGGAAGAAAGTGTATGGTATTACTTTGATTCTCATGGTGCTTTGTTCGTTTGGGTCAGGGCTTAGCTTTGGGCATTCGGCCAAAGCTACAATGACCACTTTATGCCTATTCCGCTTCTGGCTTGGCTTTGGGATTGGCGGTGATTACCCACTTTCCGCTACTATTATGTCTGAATATGCCAACAAGAAAACTCGTGGGGCTTTTATAGCTGCTGTCTTTGCCATGCAAGGATTTGGCATTTTGGCAGGTGGGATCGTCGCTTTGATTGTCGCAGGTACCAAAATTACATTTTTAATGTTATCAATCAATAATTTGGTGAGAATTGCTGCATTCAACAACAGATTCTCAGCTCCGGCATACGAGGTGGATGCGGTGGGCTCAACCGTACCGGAGGCGGACTACGTGTGGCGAGTAGTTCTAATGTTTGGAGCCATCCCCGCTGGTTTGACATACTACTGGCGTATGAAAATGCCTGAAACTGCGCGTTACACGGCTCTGGTGGCGAAGAACGCCAAGCAAGCGGCAGTGGACATGTCAAGAGTGTTGCAAGTGGAGCTGGAGGCAGAGGAAGAGAAGTTAGAGAAAATCGTGGCCACAAGCAAGAACAGTTTCGGGTTGTTTTCCAAAGAGTTTCTCAGGCGCCATGGCCTCCATTTACTCGGAACCACCAGCACTTGGTTCTTGCTGGACATCGCATTTTACAGCCAAAACCTGTTCCAAAAAGACATCTTTACAGCAATTGGTTGGCTCCCTCCCGCAAAAACCATGAGCGCTCTCGAGGAGTGCTTCAGAATCGCCAAGGCCCAAACGCTGATTGCGCTTTGTGGAACCGTGCCAGGGTATTGGTTCACCGTGGCTTTAATTGACATCATTGGGAGATTCACCATCCAATTAATTGGGTTCATAATGATGACTATTTTCATGTTTGCCATTGCGTTTCCGTACAATCATTGGATTTTGAAAGAGAATCGAATTGGGTTTCTGGTGATGTATTCACTCACCTTCTTCTTCGCCAATTTTGGGCCCAACGCCACCACTTTCATCGTTCCAGCTGAAATCTTCCCTGCCAGGCTGAGGTCCACGTGTCATGGGATCTCCGCCGCCGCTGGTAAGGCCGGAGCAATCGTCGGGGCATTTGGGTTCTTGTATGCAGCGCAGAATCCTGACGCATCCAAAACCGACCCTGGTTACCCACCGGGTTTCGGTGTTAAGAACTCTCTCATTGCACTTGGCTGCATCAACTTCCTCGGCGGTTTGCTCACATTGTTGGTGCCGGAACCTAAAGGAAAATCACTCGAGGAATTGACCGGCGAGAACGAGGCGCCGGAGGAAGACGCCGCCGCCGCCGCCCAACCAGGAAATAGAGCCGGACAAGTGTGA | 2430 | 49.47 | MDYAGFFSSISDFSSEASFGSPESCNLLPFNENDSEEMVLFGLISEATRGSSDPSIGAVRVKEEEVDSVGEESRKKERPYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGAAAILNFPVDRVRESLKEMNFSGGDPTDSITDGGGSPVIALKRKHSIRRKAISKKNKERDLRIQNVMVLEDLGAEVGKRLFSTVEVLFSVVPYTYKLKMSMTKEREIKIVRIELDCEGLKLRTNYKMAQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSARPGSLPPNVSAAVSGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVLCSFGSGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVAGTKITFLMLSINNLVRIAAFNNRFSAPAYEVDAVGSTVPEADYVWRVVLMFGAIPAGLTYYWRMKMPETARYTALVAKNAKQAAVDMSRVLQVELEAEEEKLEKIVATSKNSFGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMSALEECFRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAFPYNHWILKENRIGFLVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNPDASKTDPGYPPGFGVKNSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEAPEEDAAAAAQPGNRAGQV | 809 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 12979490 | 12986054 | + | CmaCh14G018100.1 | Cma14g01810 | 308793 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g01810 | 809 | SMART | rav1_2 | 79 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 278 | 779 | IPR020846 | GO:0022857 | |
Cma14g01810 | 809 | Pfam | Sugar (and other) transporter | 280 | 785 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Cma14g01810 | 809 | CDD | AP2 | 80 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE | 256 | 800 | - | - | |
Cma14g01810 | 809 | SUPERFAMILY | DNA-binding domain | 80 | 138 | IPR016177 | GO:0003677 | |
Cma14g01810 | 809 | TIGRFAM | 2A0109: phosphate:H+ symporter | 265 | 788 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 | |
Cma14g01810 | 809 | Pfam | AP2 domain | 80 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | Gene3D | AP2/ERF domain | 79 | 139 | IPR036955 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | Gene3D | MFS general substrate transporter like domains | 274 | 803 | IPR036259 | - | |
Cma14g01810 | 809 | SUPERFAMILY | MFS general substrate transporter | 264 | 785 | IPR036259 | - | |
Cma14g01810 | 809 | PRINTS | Ethylene responsive element binding protein signature | 80 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | PRINTS | Ethylene responsive element binding protein signature | 103 | 119 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 256 | 800 | - | - | |
Cma14g01810 | 809 | ProSiteProfiles | AP2/ERF domain profile. | 79 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g01810 | 809 | MobiDBLite | consensus disorder prediction | 781 | 809 | - | - | |
Cma14g01810 | 809 | CDD | MFS_PhT | 279 | 778 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma14g01810 | Cma17g00166 | CCT | |
Cma06g01328 | Cma14g01810 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g01330 | Cma-Chr6:8751295 | Cma14g01810 | Cma-Chr14:12979490 | 1.83E-94 | dispersed | |
Cma14g01810 | Cma-Chr14:12979490 | Cma19g00086 | Cma-Chr19:514822 | 0 | dispersed | |
Cma14g01810 | Cma-Chr14:12979490 | Cma14g01811 | Cma-Chr14:12987095 | 0 | tandem | |
Cma14g01810 | Cma-Chr14:12979490 | Cma17g00166 | Cma-Chr17:859051 | 0 | wgd | |
Cma14g01810 | Cma-Chr14:12979490 | Cma19g00084 | Cma-Chr19:506769 | 5.36E-44 | wgd | |
Cma14g01810 | Cma-Chr14:12979490 | Cma02g01751 | Cma-Chr2:9801242 | 3.52E-43 | wgd | |
Cma14g01810 | Cma-Chr14:12979490 | Cma06g01328 | Cma-Chr6:8742265 | 0 | wgd | |
Cma14g01810 | Cma-Chr14:12979490 | Cma08g01086 | Cma-Chr8:6782139 | 8.12E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
36329 | PF00083 | Sugar_tr | 7.80E-42 | CL0015 | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g01810 | K08176 | - | csv:101213007 | 961.059 |