Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01890 ATGGATAGCGACAAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACTAAATTCTTAGAAGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAGGATGCAACCGACGACTTCGAAGATGTGGGGCATAGTGACAATGCAAGAGAAATGATGGATCAATACTATGTAGGAGAGATCGATGCTTCAACAATTCCAAAGAAGGTCGCATATACGCCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCAGAGTTCATCATCAAGCTTCTCCAATTCCTCGTTCCTCTTGCAATTTTGGGATTGGCAGTCGCCATACGCTTCTACACCAAACAAACTTGA 405 43.95 MDSDKKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQT 134
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 13376466 13378957 - CmaCh14G018900.1 Cma14g01890 308873
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01890 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cma14g01890 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cma14g01890 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cma14g01890 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cma14g01890 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cma14g01890 134 PANTHER CYTOCHROME B5 1 132 - -
Cma14g01890 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cma14g01890 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cma14g01890 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cma14g01890 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Cma14g01890 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cma14g01890 134 Gene3D - 1 86 IPR036400 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01139 Cma-Chr2:6733324 Cma14g01890 Cma-Chr14:13376466 1.56E-69 dispersed
Cma05g00451 Cma-Chr5:2070589 Cma14g01890 Cma-Chr14:13376466 3.27E-37 dispersed
Cma08g00854 Cma-Chr8:5201414 Cma14g01890 Cma-Chr14:13376466 2.48E-39 dispersed
Cma14g01890 Cma-Chr14:13376466 Cma15g01010 Cma-Chr15:6090522 3.93E-69 dispersed
Cma17g00460 Cma-Chr17:2771267 Cma14g01890 Cma-Chr14:13376466 9.59E-13 dispersed
Cma14g01890 Cma-Chr14:13376466 Cma17g00107 Cma-Chr17:521732 1.80E-77 wgd
Cma14g01890 Cma-Chr14:13376466 Cma19g00162 Cma-Chr19:1082126 5.06E-65 wgd
Cma14g01890 Cma-Chr14:13376466 Cma02g01681 Cma-Chr2:9474696 4.06E-67 wgd
Cma14g01890 Cma-Chr14:13376466 Cma06g01226 Cma-Chr6:8175526 3.52E-13 wgd
Cma14g01890 Cma-Chr14:13376466 Cma06g01244 Cma-Chr6:8291203 9.76E-94 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01890 K23490 - csv:101214209 266.929