Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma14g01890 | ATGGATAGCGACAAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACTAAATTCTTAGAAGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAGGATGCAACCGACGACTTCGAAGATGTGGGGCATAGTGACAATGCAAGAGAAATGATGGATCAATACTATGTAGGAGAGATCGATGCTTCAACAATTCCAAAGAAGGTCGCATATACGCCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCAGAGTTCATCATCAAGCTTCTCCAATTCCTCGTTCCTCTTGCAATTTTGGGATTGGCAGTCGCCATACGCTTCTACACCAAACAAACTTGA | 405 | 43.95 | MDSDKKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQT | 134 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 13376466 | 13378957 | - | CmaCh14G018900.1 | Cma14g01890 | 308873 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma14g01890 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Cma14g01890 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
| Cma14g01890 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
| Cma14g01890 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
| Cma14g01890 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
| Cma14g01890 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
| Cma14g01890 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
| Cma14g01890 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
| Cma14g01890 | 134 | PANTHER | CYTOCHROME B5-LIKE | 1 | 132 | - | - | |
| Cma14g01890 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 90 | IPR036400 | - | |
| Cma14g01890 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
| Cma14g01890 | 134 | Gene3D | - | 1 | 86 | IPR036400 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma02g01139 | Cma-Chr2:6733324 | Cma14g01890 | Cma-Chr14:13376466 | 1.56E-69 | dispersed | |
| Cma05g00451 | Cma-Chr5:2070589 | Cma14g01890 | Cma-Chr14:13376466 | 3.27E-37 | dispersed | |
| Cma08g00854 | Cma-Chr8:5201414 | Cma14g01890 | Cma-Chr14:13376466 | 2.48E-39 | dispersed | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma15g01010 | Cma-Chr15:6090522 | 3.93E-69 | dispersed | |
| Cma17g00460 | Cma-Chr17:2771267 | Cma14g01890 | Cma-Chr14:13376466 | 9.59E-13 | dispersed | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma17g00107 | Cma-Chr17:521732 | 1.80E-77 | wgd | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma19g00162 | Cma-Chr19:1082126 | 5.06E-65 | wgd | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma02g01681 | Cma-Chr2:9474696 | 4.06E-67 | wgd | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma06g01226 | Cma-Chr6:8175526 | 3.52E-13 | wgd | |
| Cma14g01890 | Cma-Chr14:13376466 | Cma06g01244 | Cma-Chr6:8291203 | 9.76E-94 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma14g01890 | K23490 | - | csv:101214209 | 266.929 |