Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01950 ATGGAGTCGACTTGGGCTGTGGCCGCGGTGGTGACGGCGGTAGTGGCGGTGGCGACGGTGTTTTCGGTGTTGAAATGGGCGGCGAAGAGTTTGAATGAGTGGATATATGAGGCGAAATTGGGTGACCGGCGGTTGGCTCTGCCGCCGGGGGATTTGGGATGGCCTTTAATTGGGAATATGTTGGGTTTCCTTAGAGCCTTCAAGTCTAAGAACCCTGAAACTTTCATTGATGGCTATGTTTCCAGGTATGGGAAAACCGGAGTGTACAAGGTTCATTTGTTTGGAAACCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGTTTTGACGGACGACGAAGCGTTCCAGCCTGGCTGGCCACGCGCGGCGGTAGAGCTCATTGGAGAGAAGTCTTTCATTCAAATGCCGCAAGAAGAACACAAGCGTCTCCGCCGCTTAACCTCTGCTCCGGTGAACGGGTTCGAGGCGCTGAGCAATTACATTCCTTACATCGAAAAGAATGTATTGGAATCGTTGGAGAAATGGTCTAAAATGGGGCCCATCGAATTCTTAACTCAACTTCGTAAGCTTACTTTCACCGTTATCATGTACATTTTCCTAAGCTCTGAGAGCGAACCGGTGATGGAGATGTTGGAGAAGGAGTATACTCGGCTTAACTATGGAGTTCGAGCCATGAGAATTAACCTACCTGGATTTGCTTACCACAAAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGCTGAAAGGAATTGTGACTGAGCGAAGACGGCAAAAATTGGACAAATGGGCGCCGAAGAGGAAGGACATGATGGACCAACTGATCGATATTGTAGATGAAAATGGCCGGAAATTGGACGACGAGGAGATCATCGATATTCTGATTATGTACTTGAATGCAGGCCATGAATCTTCAGGCCACACCATGATGTGGGCGACTATTTTGTTGAATCAACACCCTGAAGTTCTCAAGAAAGCCAGGGAAGAACAGGAAGCGATTGTGAGGAACAGGCCTGCAGGTCAAACGGGATTAACATTGAAAGAATGCCGGGACATGGAATATCTCTCAAAAGTTGTTGATGAGACTCTTCGCTATGTATCATTCTCCCTTGTTGTTTTCAGAGAGGCACAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGTTGGAAAGTGCTGGCTTGGTTCAGAAGCATTCACTACGACAGTGAAGTTTACCCAGACCCAAAGAAATTTGAACCCTCAAGATGGGATGGATTTGTTCCAAAAGCAGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTATGCCCAGGAAACGATCTAGCCAAGTTGGAGATCTGCATTTTCGTTCATTATTTTCTCCTCAACTACAATCTTGAATGGCTGACCCCTGACTGTGAAATCCTGTATCTGCCCCATTCGAGGCCCAAGGACAATTGCATGGCTAAAATCACTAAGAAGTCCAGCGTGGCTGCGTGA 1491 47.95 MESTWAVAAVVTAVVAVATVFSVLKWAAKSLNEWIYEAKLGDRRLALPPGDLGWPLIGNMLGFLRAFKSKNPETFIDGYVSRYGKTGVYKVHLFGNPSVVVTTPETCRKVLTDDEAFQPGWPRAAVELIGEKSFIQMPQEEHKRLRRLTSAPVNGFEALSNYIPYIEKNVLESLEKWSKMGPIEFLTQLRKLTFTVIMYIFLSSESEPVMEMLEKEYTRLNYGVRAMRINLPGFAYHKALKARKNLVAALKGIVTERRRQKLDKWAPKRKDMMDQLIDIVDENGRKLDDEEIIDILIMYLNAGHESSGHTMMWATILLNQHPEVLKKAREEQEAIVRNRPAGQTGLTLKECRDMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDSEVYPDPKKFEPSRWDGFVPKAGEFLPFGAGSRLCPGNDLAKLEICIFVHYFLLNYNLEWLTPDCEILYLPHSRPKDNCMAKITKKSSVAA 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13730248 13734956 + CmaCh14G019500.1 Cma14g01950 308933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01950 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Cma14g01950 496 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 Pfam Cytochrome P450 48 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 Gene3D Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PANTHER CYTOCHROME P450 26 19 485 - -
Cma14g01950 496 SUPERFAMILY Cytochrome P450 43 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g01950 496 PANTHER ENT-KAURENOIC ACID OXIDASE 2 19 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01392 Cma-Chr3:8790044 Cma14g01950 Cma-Chr14:13730248 1.24E-31 dispersed
Cma07g00114 Cma-Chr7:616977 Cma14g01950 Cma-Chr14:13730248 8.11E-31 dispersed
Cma14g01950 Cma-Chr14:13730248 Cma19g00455 Cma-Chr19:5476342 2.40E-159 dispersed
Cma14g01950 Cma-Chr14:13730248 Cma16g01072 Cma-Chr16:8215647 4.14E-157 wgd
Cma14g01950 Cma-Chr14:13730248 Cma08g00978 Cma-Chr8:6108296 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01950 K04123 - csv:101221667 903.279