Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01961 ATGGGAGAAGAATTGAAGCTGTTGGTCAGAACGTCGAGTCCGTACACACTGAGAATAGTATGGGCGCTGAAGTTGAAAGGGTTGGAATACGACATCGTTTACGAAGATCACAGTCTGGCCAACGAGAGTTCGCTGCTTTTGGAGGAGATCAGTCCGATCCACAAGAACCTTCCTGTATTGCTCATCCATGGCGGAAAACCGACCGCCGAACCGCTCGTCATCCTCGAATACATCGACGGGGTTTGGAAGCAAAATCCATTACTGTCTCAGGATCCTTACCAAAGAGCCGTTGCCCGCTTCTGGGTCAAATTTGCTGAGGATAAGGTTTTGCCATCCATTATAAACGTGTTCGTGAGGGGCAACAGGAGAGAGGAAGCCATTGGAGAATTGGAAGCCTCTCGAAGAAGAGCTAAAGGGAAAGAGATTCTTTGGAAGGGAAAGTGTTGGGATTGTGGACATCGTGGTTGGAGCAGAGGAAGTGAGCTAAGAAGGGAGATGGGAGAAGAACTGAAGCTATTCAGAACGTGGTCGACTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAGTTGAAAGGATTAGAATACGACACCGTTTACGAAGATCTGGCCAACAAGAGTCCCCAGCTTCTGGAGTACAACCCGGTCCACAAGAAGGTCCCGGTTCTGGTCCATGGCGGAAAACCGATCGCTGAATCGCTCGTCATTCTGGAATACATCGATGAAATGTGGAAGCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCGCTGCTCGCTTTTGGGCCAAATTTGGGGACGACAAGGTTTTGGAATCTATAAGGAAAGTGCTGATGAACCAAGGGAAAGTGAGAGAGGAAGGTGTAGAAGAAGCCTTGGAGAATATGAAGCATTTGGAAGGAGAGTTGGAGGGAAAGAGGTTCTTTGGAGGGGAAGCCATTGGGTTCGTGGATATTGCAGTTGGGTGGCTTGCAAACATAGTGAGTGTAATGGAGGAAGTGATTGGAGTTGAGCTCATAACCGAGCAAAGGTTTCCCCTGTTGTGGAAATGGATACACGAATTTGCTGCTGCGCCTATCATAAATGAAACCTGGCCGCCTAGAGACAAGCTTGTCGCCAGGTACCAAGCAATTGATCAAGCTTCTATGAGTAAACAAGCCTAA 1164 48.28 MGEELKLLVRTSSPYTLRIVWALKLKGLEYDIVYEDHSLANESSLLLEEISPIHKNLPVLLIHGGKPTAEPLVILEYIDGVWKQNPLLSQDPYQRAVARFWVKFAEDKVLPSIINVFVRGNRREEAIGELEASRRRAKGKEILWKGKCWDCGHRGWSRGSELRREMGEELKLFRTWSTPFALRIVWALKLKGLEYDTVYEDLANKSPQLLEYNPVHKKVPVLVHGGKPIAESLVILEYIDEMWKQNPLLPQDPYQRAAARFWAKFGDDKVLESIRKVLMNQGKVREEGVEEALENMKHLEGELEGKRFFGGEAIGFVDIAVGWLANIVSVMEEVIGVELITEQRFPLLWKWIHEFAAAPIINETWPPRDKLVARYQAIDQASMSKQA 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13801828 13805918 + CmaCh14G019610.1 Cma14g01961 308944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01961 387 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Cma14g01961 387 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 166 382 - -
Cma14g01961 387 SUPERFAMILY GST C-terminal domain-like 241 379 IPR036282 -
Cma14g01961 387 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 1 126 - -
Cma14g01961 387 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 86 IPR004045 -
Cma14g01961 387 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 252 378 IPR010987 -
Cma14g01961 387 Gene3D Glutaredoxin 1 87 - -
Cma14g01961 387 Gene3D Glutaredoxin 164 248 - -
Cma14g01961 387 CDD GST_C_Tau 253 378 IPR045074 GO:0004364|GO:0006749
Cma14g01961 387 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 166 382 IPR045073 -
Cma14g01961 387 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 126 IPR045073 -
Cma14g01961 387 Gene3D - 88 148 - -
Cma14g01961 387 Gene3D - 249 386 - -
Cma14g01961 387 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 168 247 IPR004045 -
Cma14g01961 387 CDD GST_N_Tau 170 243 - -
Cma14g01961 387 Pfam Glutathione S-transferase, C-terminal domain 283 359 IPR004046 -
Cma14g01961 387 SFLD Glutathione Transferase (cytosolic) 166 385 IPR040079 -
Cma14g01961 387 SFLD Main.3: Omega- and Tau-like 166 385 IPR045073 -
Cma14g01961 387 Pfam Glutathione S-transferase, N-terminal domain 169 241 IPR004045 -
Cma14g01961 387 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Cma14g01961 387 SUPERFAMILY Thioredoxin-like 170 269 IPR036249 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01155 Cma14g01961 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00299 Cma-Chr11:1483599 Cma14g01961 Cma-Chr14:13801828 1.41E-23 dispersed
Cma13g01130 Cma-Chr13:8381645 Cma14g01961 Cma-Chr14:13801828 8.16E-21 dispersed
Cma14g01861 Cma-Chr14:13213235 Cma14g01961 Cma-Chr14:13801828 2.52E-29 dispersed
Cma14g01961 Cma-Chr14:13801828 Cma03g00390 Cma-Chr3:4381011 1.53E-21 dispersed
Cma18g01154 Cma-Chr18:9264619 Cma14g01961 Cma-Chr14:13801828 1.87E-22 dispersed
Cma14g01961 Cma-Chr14:13801828 Cma06g01155 Cma-Chr6:7777316 2.27E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01961 K00799 - csv:101219529 396.741