Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02059 ATGTCAATTTATGATGCTGCATTTGTGAACACGGAGCTCGCTAAACCGACCTCGATTTTCGGCCTTCGTCTTTGGGTTGTAATCGGAATCTTAGTCGGAGCCCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGGAACCGTCATCAGAACCAAATCCGTTTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTTCGAAGGTGATCCAGGAAATCGTCCACCACGCTGTGCCGGATCATCACCACCATGTGCAGCCGGAAATCCATGTCGAGATTGGAAAATTGGAGCATCGGGTTGTTTTCTCCGATAGACCCTCTAGTGGTGAGAGTAGAGGCGCTGTGAGTGAAAATGCTTCTTTTGGATCTGTTACTGTCGGTCCTGAGGTTTCACACCTAGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCGGCCACTAATTGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGAATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTCGAAGTGGAAGCAATTGGACGTGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTACGAGTACATCAACAATGGCAATCTAGACCAATGGCTTCATGGCGATGTTGGGGATATTAGCCCTTTAACGTGGGAGATTCGTGTTAACATCATAGTTGGAACAGCAAAGGGATTAGCATATCTTCACGAGGGTCTTGAACCAAAGGTTGTCCATCGTGATGTAAAATCAAGCAACATACTTCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTATGCCTGCACTGGGATGTTGAATGAAAAGAGTGATGTTTATAGCTTCGGAATTCTAGTTATGGAGATAATTTCAGGGCGGATCCCTGTTGATTATAGTAGACCTCAAGGAGAGGTGAATTTGGTGGATTGGTTGAAAGCAATGGTTGGAGACAGAAAATCTGAGGAAGTGGTTGACCCCAAGTTGCCAGATAAGCCTCCTTCCAAAGCTCTCAAACGGGTTTTGTTGGTTGCTCTTCGCTGTGTTGATCCTGATGCTACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTCGGTAAGAATTCTTCTCATTCGGTTCAAGGCCATCAACATGAGAACCGGGTCATTCCAAGACAAGTTAACAACCCGAAATACGAAGGTGCATCTTCTAATGTAAGTGAAGGTGACAATGGAAACTTCAACATGAAGTAG 1464 45.56 MSIYDAAFVNTELAKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHQNQIRFPKSTTDHSPPAVSKVIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSENASFGSVTVGPEVSHLGWGRWYTLRELEAATNCLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYINNGNLDQWLHGDVGDISPLTWEIRVNIIVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILVMEIISGRIPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDPKLPDKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKNSSHSVQGHQHENRVIPRQVNNPKYEGASSNVSEGDNGNFNMK 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14306599 14308817 - CmaCh14G020590.1 Cma14g02059 309042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02059 487 Gene3D Transferase(Phosphotransferase) domain 1 234 446 - -
Cma14g02059 487 Pfam Protein tyrosine and serine/threonine kinase 161 429 IPR001245 GO:0004672|GO:0006468
Cma14g02059 487 Gene3D Phosphorylase Kinase; domain 1 138 233 - -
Cma14g02059 487 CDD STKc_IRAK 164 430 - -
Cma14g02059 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Cma14g02059 487 MobiDBLite consensus disorder prediction 464 487 - -
Cma14g02059 487 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Cma14g02059 487 ProSiteProfiles Protein kinase domain profile. 158 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02059 487 SUPERFAMILY Protein kinase-like (PK-like) 136 430 IPR011009 -
Cma14g02059 487 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02059 487 PANTHER OS01G0323000 PROTEIN 2 446 - -
Cma14g02059 487 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00696 Cma-Chr7:3064864 Cma14g02059 Cma-Chr14:14306599 0 dispersed
Cma11g01100 Cma-Chr11:6090163 Cma14g02059 Cma-Chr14:14306599 3.03E-172 dispersed
Cma11g01962 Cma-Chr11:12853356 Cma14g02059 Cma-Chr14:14306599 1.28E-168 dispersed
Cma12g00558 Cma-Chr12:2910366 Cma14g02059 Cma-Chr14:14306599 3.88E-60 dispersed
Cma14g02059 Cma-Chr14:14306599 Cma19g01083 Cma-Chr19:9013783 1.90E-171 dispersed
Cma14g02059 Cma-Chr14:14306599 Cma16g00100 Cma-Chr16:447168 5.33E-71 wgd
Cma14g02059 Cma-Chr14:14306599 Cma18g01268 Cma-Chr18:9855086 6.01E-55 wgd
Cma14g02059 Cma-Chr14:14306599 Cma06g01080 Cma-Chr6:7267301 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69115 PF07714 PK_Tyr_Ser-Thr 5.90E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02059 - - csv:101219288 864.759