Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02067 ATGAAAATGGAAGTCGATTGGGATCTTCACGCCGTCGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCTGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAACCAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTCTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCGGTTTCTGCGTCAAGATCTAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGGGATATTACAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGGAAACAAGTCGAGCGGAACAGATCCGACCCGGGAATGTTCATAGTCACGTACACGGCGGAGCACAACCACCCAGCGCCGACTCACCGGAATTCTCTCGCCGGCTCTACCCGTCAAAAGCCCAACACGCAAACGCCGGCTTCCTCCGGATCCGAAAAACCCGACCCGAAGCAGCCCGTTTGTTCGTCGGAAGACCAAAGTACGATCACAGAGAGCAAAGAAGAGAAAGAGGAATTGTTAGCCGAAGATGAAGAAGACGACGACCTGGGAGTCTCCGATTTGATCGTGAGCGACGATTTCTATATGGGTTTTGAAGAACTCGACAGCCCAACCACCGACGAGTGTTTTTCCGATCAATTTCCGGGGAATTTCGATCTTCCATGGTCGTTCAACGGAGACCCAGACAGCGAAATTGTAAAACTCCCCTGGTAA 990 51.11 MKMEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQPNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPNTQTPASSGSEKPDPKQPVCSSEDQSTITESKEEKEELLAEDEEDDDLGVSDLIVSDDFYMGFEELDSPTTDECFSDQFPGNFDLPWSFNGDPDSEIVKLPW 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14362158 14364009 + CmaCh14G020670.1 Cma14g02067 309050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02067 329 ProSiteProfiles WRKY domain profile. 147 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02067 329 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g02067 329 MobiDBLite consensus disorder prediction 82 99 - -
Cma14g02067 329 SMART WRKY_cls 152 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02067 329 MobiDBLite consensus disorder prediction 106 129 - -
Cma14g02067 329 MobiDBLite consensus disorder prediction 79 144 - -
Cma14g02067 329 MobiDBLite consensus disorder prediction 210 253 - -
Cma14g02067 329 MobiDBLite consensus disorder prediction 263 277 - -
Cma14g02067 329 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02067 329 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 306 IPR044810 GO:0003700
Cma14g02067 329 MobiDBLite consensus disorder prediction 207 277 - -
Cma14g02067 329 Gene3D WRKY domain 136 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g02067 329 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01087 Cma14g02067 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00047 Cma-Chr7:284916 Cma14g02067 Cma-Chr14:14362158 3.07E-43 dispersed
Cma14g02067 Cma-Chr14:14362158 Cma18g00530 Cma-Chr18:3291663 1.87E-44 dispersed
Cma14g02067 Cma-Chr14:14362158 Cma15g01067 Cma-Chr15:6759134 1.14E-18 wgd
Cma14g02067 Cma-Chr14:14362158 Cma02g01084 Cma-Chr2:6451561 7.25E-54 wgd
Cma14g02067 Cma-Chr14:14362158 Cma06g01087 Cma-Chr6:7334632 6.07E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36352 PF03106 WRKY 4.30E-25 CL0274 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02067 K13425 - csv:101217082 472.626