Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02105 ATGGGTTCTCAGATACCAAAATCTGCAAGGTTTGGGCATCCAACTTCTGATTTTCATGACAAATATGGAAGTCATCAAAACAGAAGCAGACTGTCTCCAGGGTCAATATTGGAGAGCATAGAGAGAAAATTTTCAAGTGCTTATAAGAGCGTTAGAAGGATAATAACACACTTAAGTTTCAAGCATCCAGGTGATCAGTCAGTAAAGAAACCGAAGTTCTGGAAGAAAATTCTTGATCCACAGAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGCTCTCTTCTGTCATAGCAGTAGCTGTGGATCCTCTCTTCTTTTACATCCCAGTGATCGACGGTGAACGTCAATGCCTAACCATAGACCGACAACTTATGATCATTGCTTGTGTTCTTCGTTCAGTCATGGACTTATTTTATGTACTTCACATGATCTTTGAATTTCGAACGGGTTTTCTTCCCCCTTCTTTACCAGTATTTGGAAGTGGAGAATTAATCGAAGATCCAGCAGCTATAGCAAAGAGATATCTCTTATCGAACTTCTTGATTGATATCTTATCCGTTCTCCCACTGCCTCAGCTTTTGGTATTAGCAATCATTCCTGCAGCGAAAGGCCCAATTCCATTAAAGACAAAGGATGTTGTGAAGATTGCAGTTCTTTTGCAATATGTTCCAAGACTTCTCCGAATCTATCCACTATACAGAGAAGTAACCAGAACAGTTGGCATACTGACAGAAACAGCCTGGAGTGGAGCTGCCTTCAATCTCCTTATTTATATGCAAGTTAGTCATGTTGTTGGTGCCATTTGGTATTTGTTATCAGTAGAACGACAAGCCAAATGCTGGGTCGAGGCCTGCAGGAAAGATAAGTGTAAGGACAATTTTCTGTACTGTGGAAATCAAAGAAGACAAATACAGCCGTACATAGATCAGTATTGCTCCCCTAAGGAGCCTGAAGATGGAAAAACCTTCAACTTTGGGATGTATGTTGAAGCCCTCAAGTTTCAATTGACCAGTACGACGTCTTTTCGCCGCAAATTCTTCTATTCCTTCTGGTGGGCTTTGAGAAATGTCAGCTCTAGTGGACAAAACCTTCAAGTAAGCAATTACATGGGGGAGGTTTTTTTTGCTGTCTTCATTGCCATTCTTGGTTTGGTTTTATTTGCGTTACTCATTAGCAATATTCAGAAATATCTGCAGTCAGCAACTGTTAAAGTAGAGCAGATGAGAATTAACCGAAGAGACGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGACTTGAGGCAGCGTATTCGACGATATGATCAGTACAAATGGCAGCTAAACAGGGGAGTTAAGGAAGAGGAACTCATCGGTAACCTTCCTAAAGACCTCAGGAGAGACATCAAACGCCATCTTTGCTATGCCCTTCTAAAGAAAGTGCCACTTTTTAGCGGCATGGACAAGCAACTGTTGGACGCGATGTGTGAATATCTCAAGCCTGTGTTATTCACAGAGAAGAGCTTCATTCTGCAAGAGGGTGACCCAATTGATATGATGCTATTTATCATGAAAGGAAAGTTGGCTACCATTATTACTTATGGTTGGAAAAACGACACTTTCTCGGCCGTTCTTAACGCAGGTGACTTTTGTGGTGAAGAACTAGTTCAATGGGCAAGGGATCCCACCTCCACTTCCCTTCCCATTTCAAGCAGAACAGTTAAGTCTCTTACTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGTTGAAATCTGTAACTAGTCAGTTCCACTTCCAGCGTCTCAATAGCAAGCAATTCCAACTCTCAGTGAGGTTCTACTCCCATCAATGGAATGTTTGGGCAGCCTACAAAATACAAGAAGCTTGGCAGGAGTACCGTGAAAGAAAGCGGAGGGGGGTGAGAGGAGATGGCAGGTTTCAAGCTGCATTGGCCAAAACGGCTGGCGCCTCGGTGGGCTTTGGCGCCACTCTGTATGCTTCCATATTCATATCCCATCTACTGCAAGTGGTGCAGCGTGATCAACATCGGGAAACTGTTCAACTCACCCGAGTGATGACACTACCGCCGCCTCCAAAGCCAGACGATGAGCCAGACAGGCCAAACGTCACAATCTTGAATCTGTAA 2133 43.37 MGSQIPKSARFGHPTSDFHDKYGSHQNRSRLSPGSILESIERKFSSAYKSVRRIITHLSFKHPGDQSVKKPKFWKKILDPQKPFLQQWNKIFVLSSVIAVAVDPLFFYIPVIDGERQCLTIDRQLMIIACVLRSVMDLFYVLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLLSNFLIDILSVLPLPQLLVLAIIPAAKGPIPLKTKDVVKIAVLLQYVPRLLRIYPLYREVTRTVGILTETAWSGAAFNLLIYMQVSHVVGAIWYLLSVERQAKCWVEACRKDKCKDNFLYCGNQRRQIQPYIDQYCSPKEPEDGKTFNFGMYVEALKFQLTSTTSFRRKFFYSFWWALRNVSSSGQNLQVSNYMGEVFFAVFIAILGLVLFALLISNIQKYLQSATVKVEQMRINRRDAEHWMAHRMLPEDLRQRIRRYDQYKWQLNRGVKEEELIGNLPKDLRRDIKRHLCYALLKKVPLFSGMDKQLLDAMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATIITYGWKNDTFSAVLNAGDFCGEELVQWARDPTSTSLPISSRTVKSLTEVEAFALKANELKSVTSQFHFQRLNSKQFQLSVRFYSHQWNVWAAYKIQEAWQEYRERKRRGVRGDGRFQAALAKTAGASVGFGATLYASIFISHLLQVVQRDQHRETVQLTRVMTLPPPPKPDDEPDRPNVTILNL 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14540281 14544209 + CmaCh14G021050.1 Cma14g02105 309088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02105 710 Gene3D - 91 402 - -
Cma14g02105 710 MobiDBLite consensus disorder prediction 1 30 - -
Cma14g02105 710 Gene3D Jelly Rolls 476 593 IPR014710 -
Cma14g02105 710 SUPERFAMILY Voltage-gated potassium channels 79 400 - -
Cma14g02105 710 Pfam Ion transport protein 87 406 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cma14g02105 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 696 - -
Cma14g02105 710 CDD CAP_ED 478 609 IPR000595 -
Cma14g02105 710 SMART cnmp_10 478 601 IPR000595 -
Cma14g02105 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 47 696 - -
Cma14g02105 710 Gene3D Helix hairpin bin 403 469 - -
Cma14g02105 710 ProSiteProfiles cAMP/cGMP binding motif profile. 478 562 IPR000595 -
Cma14g02105 710 SUPERFAMILY cAMP-binding domain-like 407 593 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01057 Cma-Chr6:7116344 Cma14g02105 Cma-Chr14:14540281 0 dispersed
Cma14g02105 Cma-Chr14:14540281 Cma05g01038 Cma-Chr5:8307756 0 dispersed
Cma14g02105 Cma-Chr14:14540281 Cma18g01305 Cma-Chr18:10032716 0 wgd
Cma14g02105 Cma-Chr14:14540281 Cma02g01109 Cma-Chr2:6588999 0 wgd
Cma14g02105 Cma-Chr14:14540281 Cma06g01056 Cma-Chr6:7115695 1.85E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02105 K05391 - csv:101206492 1090.1