Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02124 ATGGAGTCTCTTGATACTGCTGCCGAGAAAGATCCAAACGGTCGATACGTTCGGTTCGATGAAATCGTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTTGACGAAGTTGATGGCATTGAAGTTGCCTGGAACCAAGTAAGGATTGATGGTTTCCTGCAGTCTCCTGAGGATTTGGAAAAGTTGTACTCCGAAGTACTTTTACTTAAATCCTTAAGACATGAGAACATTATCAAGTTCTACAATTCATGGGTGGATGATAAGAATAAAACAGTCAACATTATTACTGAGCTCTTCACATCTGGGAATTTGAGACAATACCGTAAGAAGCACAAACATGTTAATATGAAGGCCATAAAGAATTGGGCGCGACAGATTCTCCGAGGCTTGGACTATCTTCACAGTCACAATCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCTATTATTTTGAAGCAGCCTACTGCTCGAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTATTGATGTATATGCTTTTGGGATGTGCATGCTGGAGATGGTTACGTTTGAGTATCCTTATAGTGAATGTAAAAATCCGGCTCAGATCTTCAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGATAAGGTGAGTGATCCACAAACCAAGGAGTTCATCAATAAATGTTTGGTTCCGGTGCAAGATAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCATTCCTTCAAGTTGAGAACCCCAAGGAATCAACGCACGATCTCCTACAGTTACCTAACCATGTTCCTAAATCGATAAATTTGCCAAAGAGTGAACCTATTGACATTGACCTCAAACAACATTCTATGACCACCAGTGCTGAAAGCAATAGTGGGAGTCCACTGTTTCCAGACATGGAATTCCAGACTATGAACAAGAACAATGAGTTTAGGTTACGTGGAAATAAGAATGACGACAACTCGGTGGTGTTAACCTTGCGTATTGCAGACTCGAACGGTCGAGTGAGGAATATACATTTTACGTTTTATCTTGGTTCTGATACTGCACTATCAGTGGCAGCTGAAATGGCTGAACAATTGGAGTTGGAAAATCATGATGTTGATTTCGTAGCTGAACTTATTGACTTATTGATAACAAAACTGGTACCTGGTTGGAAGCCGTTGTTTTATTATTCCTTAAATGGAGAGTTGAGTCTTTGTGGCGGCCCCCCTACCCTTTTAAGTGCCAAATCATCTATTGCATCTCCATGGGATTCAATGTTAAATGGGGTGGATGATGGTCTGCAATCGAATGGAGATGGTGGCTGGGCTGATGATATTCCCAATAGTCAAATTTTTGATACTTGCCCTTCTTCTCCCAGCTTCGCTAAGTTTGAGGACCTGAGTTCTCATACTTCATTCGCATCAGAGTTATTGGTCAAAGACTGTTCGACCAAAAGTGCTAAGGTGATGGATTGTTCGAATATTGTTGATGGAAGCTCAAAGGGGTCGTCGACCTGGTCGGCTGCAGAACTAGAGCTCCAAGGTGCATTAGATGTTGGAAAGTTGAATCCCATGGATTATTTTGTGAAGAACTCAGTGATGTCATTGGCAAATGAAGCAGCAGCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGCTATCCTTAACGGACAAGGATCTGGATGCCGAACTGGAGATGGAACTTGATGCTATTGAGAGACATTATCAGCAGCTGGTGGAGGAGCTGTCTCGAATGAGAGAGGAGGCAGTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAGCTGATTCATTGA 1896 41.72 MESLDTAAEKDPNGRYVRFDEIVGRGAFKTVYKAFDEVDGIEVAWNQVRIDGFLQSPEDLEKLYSEVLLLKSLRHENIIKFYNSWVDDKNKTVNIITELFTSGNLRQYRKKHKHVNMKAIKNWARQILRGLDYLHSHNPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIILKQPTARSVIGTPEFMAPELYEEEYNELIDVYAFGMCMLEMVTFEYPYSECKNPAQIFKKVTSGIKPASLDKVSDPQTKEFINKCLVPVQDRLSAKELLKDSFLQVENPKESTHDLLQLPNHVPKSINLPKSEPIDIDLKQHSMTTSAESNSGSPLFPDMEFQTMNKNNEFRLRGNKNDDNSVVLTLRIADSNGRVRNIHFTFYLGSDTALSVAAEMAEQLELENHDVDFVAELIDLLITKLVPGWKPLFYYSLNGELSLCGGPPTLLSAKSSIASPWDSMLNGVDDGLQSNGDGGWADDIPNSQIFDTCPSSPSFAKFEDLSSHTSFASELLVKDCSTKSAKVMDCSNIVDGSSKGSSTWSAAELELQGALDVGKLNPMDYFVKNSVMSLANEAAANVMSLTSSCSSLSLTDKDLDAELEMELDAIERHYQQLVEELSRMREEAVEATRKRWIAKKKLIH 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14602846 14606068 + CmaCh14G021240.1 Cma14g02124 309107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02124 631 CDD bZIP 584 614 - -
Cma14g02124 631 CDD STKc_WNK 15 274 - -
Cma14g02124 631 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02124 631 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Cma14g02124 631 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02124 631 SUPERFAMILY Protein kinase-like (PK-like) 19 322 IPR011009 -
Cma14g02124 631 Coils Coil 587 621 - -
Cma14g02124 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 629 - -
Cma14g02124 631 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Cma14g02124 631 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 355 409 IPR024678 GO:0004674|GO:0005524
Cma14g02124 631 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02124 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cma14g02124 631 PANTHER KINASE DOMAIN PROTEIN 4 629 - -
Cma14g02124 631 Gene3D - 351 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g02124 Cma-Chr14:14602846 Cma15g01310 Cma-Chr15:8251622 0 dispersed
Cma14g02124 Cma-Chr14:14602846 Cma02g00935 Cma-Chr2:5561683 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69117 PF00069 Pkinase 1.10E-52 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02124 K08867 - csv:101204101 993.03