Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g02124 | ATGGAGTCTCTTGATACTGCTGCCGAGAAAGATCCAAACGGTCGATACGTTCGGTTCGATGAAATCGTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTTGACGAAGTTGATGGCATTGAAGTTGCCTGGAACCAAGTAAGGATTGATGGTTTCCTGCAGTCTCCTGAGGATTTGGAAAAGTTGTACTCCGAAGTACTTTTACTTAAATCCTTAAGACATGAGAACATTATCAAGTTCTACAATTCATGGGTGGATGATAAGAATAAAACAGTCAACATTATTACTGAGCTCTTCACATCTGGGAATTTGAGACAATACCGTAAGAAGCACAAACATGTTAATATGAAGGCCATAAAGAATTGGGCGCGACAGATTCTCCGAGGCTTGGACTATCTTCACAGTCACAATCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCTATTATTTTGAAGCAGCCTACTGCTCGAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTATTGATGTATATGCTTTTGGGATGTGCATGCTGGAGATGGTTACGTTTGAGTATCCTTATAGTGAATGTAAAAATCCGGCTCAGATCTTCAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGATAAGGTGAGTGATCCACAAACCAAGGAGTTCATCAATAAATGTTTGGTTCCGGTGCAAGATAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCATTCCTTCAAGTTGAGAACCCCAAGGAATCAACGCACGATCTCCTACAGTTACCTAACCATGTTCCTAAATCGATAAATTTGCCAAAGAGTGAACCTATTGACATTGACCTCAAACAACATTCTATGACCACCAGTGCTGAAAGCAATAGTGGGAGTCCACTGTTTCCAGACATGGAATTCCAGACTATGAACAAGAACAATGAGTTTAGGTTACGTGGAAATAAGAATGACGACAACTCGGTGGTGTTAACCTTGCGTATTGCAGACTCGAACGGTCGAGTGAGGAATATACATTTTACGTTTTATCTTGGTTCTGATACTGCACTATCAGTGGCAGCTGAAATGGCTGAACAATTGGAGTTGGAAAATCATGATGTTGATTTCGTAGCTGAACTTATTGACTTATTGATAACAAAACTGGTACCTGGTTGGAAGCCGTTGTTTTATTATTCCTTAAATGGAGAGTTGAGTCTTTGTGGCGGCCCCCCTACCCTTTTAAGTGCCAAATCATCTATTGCATCTCCATGGGATTCAATGTTAAATGGGGTGGATGATGGTCTGCAATCGAATGGAGATGGTGGCTGGGCTGATGATATTCCCAATAGTCAAATTTTTGATACTTGCCCTTCTTCTCCCAGCTTCGCTAAGTTTGAGGACCTGAGTTCTCATACTTCATTCGCATCAGAGTTATTGGTCAAAGACTGTTCGACCAAAAGTGCTAAGGTGATGGATTGTTCGAATATTGTTGATGGAAGCTCAAAGGGGTCGTCGACCTGGTCGGCTGCAGAACTAGAGCTCCAAGGTGCATTAGATGTTGGAAAGTTGAATCCCATGGATTATTTTGTGAAGAACTCAGTGATGTCATTGGCAAATGAAGCAGCAGCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGCTATCCTTAACGGACAAGGATCTGGATGCCGAACTGGAGATGGAACTTGATGCTATTGAGAGACATTATCAGCAGCTGGTGGAGGAGCTGTCTCGAATGAGAGAGGAGGCAGTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAGCTGATTCATTGA | 1896 | 41.72 | MESLDTAAEKDPNGRYVRFDEIVGRGAFKTVYKAFDEVDGIEVAWNQVRIDGFLQSPEDLEKLYSEVLLLKSLRHENIIKFYNSWVDDKNKTVNIITELFTSGNLRQYRKKHKHVNMKAIKNWARQILRGLDYLHSHNPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIILKQPTARSVIGTPEFMAPELYEEEYNELIDVYAFGMCMLEMVTFEYPYSECKNPAQIFKKVTSGIKPASLDKVSDPQTKEFINKCLVPVQDRLSAKELLKDSFLQVENPKESTHDLLQLPNHVPKSINLPKSEPIDIDLKQHSMTTSAESNSGSPLFPDMEFQTMNKNNEFRLRGNKNDDNSVVLTLRIADSNGRVRNIHFTFYLGSDTALSVAAEMAEQLELENHDVDFVAELIDLLITKLVPGWKPLFYYSLNGELSLCGGPPTLLSAKSSIASPWDSMLNGVDDGLQSNGDGGWADDIPNSQIFDTCPSSPSFAKFEDLSSHTSFASELLVKDCSTKSAKVMDCSNIVDGSSKGSSTWSAAELELQGALDVGKLNPMDYFVKNSVMSLANEAAANVMSLTSSCSSLSLTDKDLDAELEMELDAIERHYQQLVEELSRMREEAVEATRKRWIAKKKLIH | 631 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14602846 | 14606068 | + | CmaCh14G021240.1 | Cma14g02124 | 309107 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g02124 | 631 | CDD | bZIP | 584 | 614 | - | - | |
Cma14g02124 | 631 | CDD | STKc_WNK | 15 | 274 | - | - | |
Cma14g02124 | 631 | Pfam | Protein kinase domain | 20 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g02124 | 631 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 98 | - | - | |
Cma14g02124 | 631 | ProSiteProfiles | Protein kinase domain profile. | 17 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g02124 | 631 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 322 | IPR011009 | - | |
Cma14g02124 | 631 | Coils | Coil | 587 | 621 | - | - | |
Cma14g02124 | 631 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 4 | 629 | - | - | |
Cma14g02124 | 631 | Gene3D | Transferase(Phosphotransferase) domain 1 | 100 | 280 | - | - | |
Cma14g02124 | 631 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 355 | 409 | IPR024678 | GO:0004674|GO:0005524 | |
Cma14g02124 | 631 | SMART | serkin_6 | 17 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g02124 | 631 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672|GO:0006468 | |
Cma14g02124 | 631 | PANTHER | KINASE DOMAIN PROTEIN | 4 | 629 | - | - | |
Cma14g02124 | 631 | Gene3D | - | 351 | 415 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g02124 | Cma-Chr14:14602846 | Cma15g01310 | Cma-Chr15:8251622 | 0 | dispersed | |
Cma14g02124 | Cma-Chr14:14602846 | Cma02g00935 | Cma-Chr2:5561683 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69117 | PF00069 | Pkinase | 1.10E-52 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g02124 | K08867 | - | csv:101204101 | 993.03 |