Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02137 ATGAACGTGAAAGCTCCGGCGACGAGGACTCGTGTTGGGAAGTACGAGCTCGGCAAAACCCTCGGCGAAGGCACTTTTGCTAAGGTCAAGTTCGCGAAGAATGTTGAGAATGGTGATTATGTTGCCATCAAGATTCTCGACCGGGAACAAGTTCTTCGCCACAAGATGGTCGAACAGATTAAAAGAGAGATATCGACTCTGAAAGTTATAAAGCATCCGAACGTTGCTAAGATTTATGAGGTTATGGCAAGCAAATCAAAAATCTACATTGTTCTTGAGTTTGTGGATGGAGGCGAGCTTTTTGACAAAATAGCCGCAAAGGGAAGGCTCAAAGAGGATGAGGCAAGGAAATATTTCCAGCAACTTATTAACGCTGTAGATTACTGCCATAGTAGAGGAGTGTACCATCGAGATCTGAAGCCTGAAAATCTTCTTCTGGATTCACATGATGTTCTTAAGGTGTCAGATTTTGGACTGAGTGCATTTTCACAGCAAGTACGAGGGGATGGTCTTCTTCACACTGCCTGTGGGACCCCAAACTACGTAGCTCCCGAGGTCTTCAACGATAAAGGTTATGATGGTACATCATCTGATATTTGGTCATGCGGGGTCATTCTCTTTGTTCTTATGGCTGGCTTCTTGCCTTTTGACGAGCCAAATCTGATGTGTTTGTATACAAAAATTTCGAAGGCTGATTTCTGCTTTCCATCATGGTTCTCAAATGGCGCTAAAAAACTTGTTCGCCGCATTCTTGATCCCCACCCTCTTACCCGAATAACGATAGCCGAAATTCAAGAAGATGCATGGTTCAAGAAGGGCTACACACCTGCTCAATTTGAAGTGGAAGAGGATATAACTCTCGATGATGTAGATGCCGCTTTTAGCAGCTCGAGGGAACATCTTGTGACTGAAAGAAAAGAGAAGCCAATGTCCATGAACGCTTTTGAGCTCATCTCTAGGTCACCTGGTTTCAGTCTTGAAAATCTATTTGAGAAGCAGAAGACTGTTACAAAGAGAGAAACCCGTTTTACTTCGCAAAGTCCTGCAAATGAGATCATGTCGAAGATTGAAGAAACGGCGAAACCGATGGGGTTCAATGTACGAAAACGGGACTACAAGATGAAGTTACAAGGTGACAAGACTGGGAGGAAAGGACACCTCTCCATAGCTACTGAGGTGTTTGAGGTGGCACCTTCCTTGCATATGGTGGAGCTTCGGAAGACGAGTGGCGATACGCTCGAGTTTCACAAGGCACGTCAATCATTCTACAAAAGTTTCTCTTCAGGATTGAAAGACATTGTGTGGAGAACTGATGAAAATACTGTTGAAGGGAGCTGA 1338 44.25 MNVKAPATRTRVGKYELGKTLGEGTFAKVKFAKNVENGDYVAIKILDREQVLRHKMVEQIKREISTLKVIKHPNVAKIYEVMASKSKIYIVLEFVDGGELFDKIAAKGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDSHDVLKVSDFGLSAFSQQVRGDGLLHTACGTPNYVAPEVFNDKGYDGTSSDIWSCGVILFVLMAGFLPFDEPNLMCLYTKISKADFCFPSWFSNGAKKLVRRILDPHPLTRITIAEIQEDAWFKKGYTPAQFEVEEDITLDDVDAAFSSSREHLVTERKEKPMSMNAFELISRSPGFSLENLFEKQKTVTKRETRFTSQSPANEIMSKIEETAKPMGFNVRKRDYKMKLQGDKTGRKGHLSIATEVFEVAPSLHMVELRKTSGDTLEFHKARQSFYKSFSSGLKDIVWRTDENTVEGS 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14655135 14661141 + CmaCh14G021370.1 Cma14g02137 309120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02137 445 SUPERFAMILY Protein kinase-like (PK-like) 12 307 IPR011009 -
Cma14g02137 445 Pfam NAF domain 309 369 IPR004041 GO:0007165
Cma14g02137 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Cma14g02137 445 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Cma14g02137 445 CDD STKc_SnRK3 14 269 - -
Cma14g02137 445 CDD CIPK_C 313 432 - -
Cma14g02137 445 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02137 445 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 438 - -
Cma14g02137 445 Gene3D Transferase(Phosphotransferase) domain 1 95 276 - -
Cma14g02137 445 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02137 445 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cma14g02137 445 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02137 445 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Cma14g02137 445 Gene3D Kinase associated domain 1, KA1 306 436 - -
Cma14g02137 445 PANTHER - 7 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01424 Cma-Chr3:8903484 Cma14g02137 Cma-Chr14:14655135 0 dispersed
Cma13g00516 Cma-Chr13:5462466 Cma14g02137 Cma-Chr14:14655135 0 dispersed
Cma14g01555 Cma-Chr14:11700857 Cma14g02137 Cma-Chr14:14655135 2.31E-153 dispersed
Cma14g02137 Cma-Chr14:14655135 Cma07g01230 Cma-Chr7:6791652 3.62E-166 dispersed
Cma14g02137 Cma-Chr14:14655135 Cma06g00994 Cma-Chr6:6719204 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69118 PF00069 Pkinase 9.30E-70 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02137 - - csv:101203531 830.861