Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02155 ATGTACCAGTCCTATGATCTCGATTGGTCCCCGGCCATTGCTACCTGGTACGGTACCCCCAATGGTGCCGGGAGCGATGGAGGTTCCTGTGGGTATGAAAAAGCGGTCGAGGAACCACCATTTTCGTCGTTAATCGCCGCAGGTGGCCCTTCTTTGTACAAATCCGGCAAAGCCTGTGGAGCTTGTTATCAGGTGAAGTGCTCCGGAGAAGGTGCATGTTCAGGGAGTCCGGTGACGGTGGTTATAACTGATAGTTGTCCGGGCGGCTCCTGTGCTTCCGACTCTGTCCACTTCGACCTCAGTGGCACTGCTTTTGGTGCTATGGCTGCTCCTGGGCGGGCCGATGAACTCCGCAGTCTCGGCGTTTTGCACATTCAACATAAGAGGGTGGAATGCAATTACCCGGGAACCTCGATCAACTTCATCGTGGACTCAGGGTCGAACCCAAACTACTTCGCAGTTCTGATCGAATACGAAGATGGAGATGGAGAGCTAGGTTTAGTGGAGCTGAAACCGGCGCTCAACTCGTACTCATGGATTCCAATGCAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTCTGCTTCTGCGCTTCAACCTCCCTTCTCCCTCAGGCTCACTGCCCTCGGCTCCGGCAAGACCGTGGTGGCTAACAAAGTAATTCCGGTCGGGTGGCAGCCCGGACAGACTTATAGATCAGTGGTCAACTTCGATACATAA 720 54.31 MYQSYDLDWSPAIATWYGTPNGAGSDGGSCGYEKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAAPGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNPNYFAVLIEYEDGDGELGLVELKPALNSYSWIPMQQSWGAVWKLDSASALQPPFSLRLTALGSGKTVVANKVIPVGWQPGQTYRSVVNFDT 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14770870 14771928 + CmaCh14G021550.1 Cma14g02155 309138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02155 239 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 137 IPR007112 -
Cma14g02155 239 Pfam Lytic transglycolase 46 124 IPR009009 -
Cma14g02155 239 SUPERFAMILY PHL pollen allergen 138 233 IPR036749 -
Cma14g02155 239 SMART dpbb_1 45 127 IPR007112 -
Cma14g02155 239 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 150 233 IPR007117 -
Cma14g02155 239 Pfam Expansin C-terminal domain 139 222 IPR007117 -
Cma14g02155 239 Gene3D - 1 133 IPR036908 -
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 87 102 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 109 124 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 47 58 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 157 172 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PRINTS Major pollen allergen Lol pI signature 188 205 IPR005795 GO:0005576|GO:0019953
Cma14g02155 239 PANTHER EXPANSIN-B3 7 238 - -
Cma14g02155 239 PANTHER EXPANSIN-B2-RELATED 7 238 - -
Cma14g02155 239 SUPERFAMILY Barwin-like endoglucanases 8 157 IPR036908 -
Cma14g02155 239 Gene3D - 134 237 IPR036749 -
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 120 136 IPR007118 GO:0005576
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 8 23 IPR007118 GO:0005576
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 26 44 IPR007118 GO:0005576
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 179 193 IPR007118 GO:0005576
Cma14g02155 239 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01872 Cma-Chr11:12428645 Cma14g02155 Cma-Chr14:14770870 5.93E-73 dispersed
Cma14g02155 Cma-Chr14:14770870 Cma20g00193 Cma-Chr20:916333 1.17E-74 dispersed
Cma14g02155 Cma-Chr14:14770870 Cma06g00956 Cma-Chr6:6481885 3.68E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02155 - - csv:101219528 431.409