Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g02156 | ATGGTGGGGGTGAAAGGACTAGGATTCTCGAAGGTGGTTCTGCGGTCGGTGTTTTTGAATTTCACTCTCTCTCCGTCTTTCCTTTCTACAGAAATCAAGGCCAGCCAGGAGTATTTTGGATATTTGGGGTGTTTGAGAATGGATAAAGTCGAGTTGAGCGGTGTGTACGACGACGCCATGGATATGGACTTGGACTTGGACCTGGACTTGGTCTTGGATGAAGATGATCGGACAAAGAGGAAGAAAATCAAGAATCAGACAGTGGACATAGAGATGAAACATATTCACCACGCCGACGAAGATGGATCACACAAGCTTTTCCCGAAACAGGCGCTTAGTGTTCTGCTTGTTGAAGCTGATGATTCTACTCGCCGGATCATCGCCGCGCTTCTTCGTAAATGCAGTTACAGAGTCTATGCTGTTCCTGATGGACTGAAGGCATGGGAATGTTTGAAGGGAAGACCGCATAATATTGATCTCGTACTTACTGAAGTGGATTTGCCATCAATATCTGGTTATGCACTACTAACGTTAGTCATGGAGCACGACATTTGCAAAAATATTCCTGTTATAATGATGTCATCTTGCGACGCAGTTAGCATGGTCTTGAAGTGTATGTTAAAAGGTGCGGCTGATTTTCTTATTAAGCCAATTAGAAAAAATGAGCTCAAGAACCTTTGGCAGCATGTTTGGAGAAGGCACACGAAGATTAGTGGGAAATTTCCCTCCTATTTAACTGTTGGACAGCGTGAAGTTGTGGCCACTTCTGATAATGATGAAGGTAGCAATTATTCAAGTTACTGTGTGGCTTCTAGAAAGAAAATTAAGGAATGCAGTGAGAAGGGAAGTGATGCCCAGAGCTCTTGTACAACACCTTACTTGGAAGCTGAGAATAGATGCATGCCAAATATGCAGGGTCTGTCACCACTGAAGGATGGGACTGCTCCAAAGCTAAATATGAGTTGTAAGAAACGTGGATTTGGTGCTTATATGGACAAAGAATTTGATATACTTAAAACCAACATCAGAGATAAGTCGGATAATGTGGCCAAAAGTGAAGCTTGCAATTCAGTTCCTTCAAGAATGAAAGAAGATTGTGTTATTGCAGAAATAAGAAGCCAGAATAAAGTTTTGAGGCCTGACTTTTACAAGGTCGTCGATGATGGTGCTTCTGAGATGTTTAGTTACAACAATAAGGACACTGAACCTTCCAGGAGTATCAACGACTTGATAGGAAATTTTGACAATAATCGGAAGCACATCAATAGCATCTGCAAGTTTGATGAACATCAAAAGTGCTGGTTATCTAGCTCCAACGATGCCAGCGCAATCAAATTAGAATTTTCTCCTCAGTTGGAGCTTTCTTTAAGAAGTATTTCCCCGGCCAAACCAGAAGGCCAGTGGAGCGAAAATGGGCATGTGCTGAACCACTCCAATGCTTCAGCCTTTTCATCGTACAATAGCTGTAAGATGATGAAACCCCCTTCTGTGACACAACCCAATGCCCCTACTGAATCAGACACAAGTGCTGGTCAATCTCCTAGACCATTGCCAAGTCTACTGTCAGGAATTTCGGGTTGTACATACCAAGACCATGGAGTTCCAGTAAGAAACAGTCGGAAGAATATGACCCCAAAGGTTGCTGGCGGGTTTGACCAGGCTGAACATCAAATTCTGCAACCACAACTTGATCTTTTTCCAGATCCAGATTTGATATCTGATAAGGCTCCCGCTGGTCGTGTTCTCCATTCCATGTTCTACACGCCATCAGTCTTGCCTCGAGTTCCTAATACCAGATCAACATGTGAACAAGAGGTGTCTCCCATTTCTGTTGATACCTCATTCCATAACTGTCGTGATATTTCCAACCCGAGAAAAGTTGGTCATCAATATGTAGAAAACACAGATAATACTATTGAACGAGTGGCAGAGGAGTTGAAACATGACTCTCCTAGTGCTGCTACACATAGTGCCAGTAGTAGCTTATGCAATGAAACGGATCATATAAATAGCAACACGAATGGGAGCATTTGCAACCAAACAGAAGGCAACACCTCGTCAAGTGTAGTGGATGACAAGACTGCAGCCTCTGAAAATATGAATGCATCCAATGTCTTTACCTATGAAGGAAGTAAAGGACTGGATTCTTCTCGTTCCAGGCATAGGGAAGCCGCTCTGGAGAAGTTCAGGTTGAAACGGAAAGGTCGTTGTTATGAGAAAAAGGTCAGATATCAAAGCCGGAAAAGATTGGCAGAGCAGCGACCGCGAGTTAAAGGACAATTTGTACGTCAACGGCCTAGTGACCGACCAGCCTCGGACCCTGGATGTCGATGA | 2334 | 43.53 | MVGVKGLGFSKVVLRSVFLNFTLSPSFLSTEIKASQEYFGYLGCLRMDKVELSGVYDDAMDMDLDLDLDLVLDEDDRTKRKKIKNQTVDIEMKHIHHADEDGSHKLFPKQALSVLLVEADDSTRRIIAALLRKCSYRVYAVPDGLKAWECLKGRPHNIDLVLTEVDLPSISGYALLTLVMEHDICKNIPVIMMSSCDAVSMVLKCMLKGAADFLIKPIRKNELKNLWQHVWRRHTKISGKFPSYLTVGQREVVATSDNDEGSNYSSYCVASRKKIKECSEKGSDAQSSCTTPYLEAENRCMPNMQGLSPLKDGTAPKLNMSCKKRGFGAYMDKEFDILKTNIRDKSDNVAKSEACNSVPSRMKEDCVIAEIRSQNKVLRPDFYKVVDDGASEMFSYNNKDTEPSRSINDLIGNFDNNRKHINSICKFDEHQKCWLSSSNDASAIKLEFSPQLELSLRSISPAKPEGQWSENGHVLNHSNASAFSSYNSCKMMKPPSVTQPNAPTESDTSAGQSPRPLPSLLSGISGCTYQDHGVPVRNSRKNMTPKVAGGFDQAEHQILQPQLDLFPDPDLISDKAPAGRVLHSMFYTPSVLPRVPNTRSTCEQEVSPISVDTSFHNCRDISNPRKVGHQYVENTDNTIERVAEELKHDSPSAATHSASSSLCNETDHINSNTNGSICNQTEGNTSSSVVDDKTAASENMNASNVFTYEGSKGLDSSRSRHREAALEKFRLKRKGRCYEKKVRYQSRKRLAEQRPRVKGQFVRQRPSDRPASDPGCR | 777 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14772231 | 14778535 | - | CmaCh14G021560.1 | Cma14g02156 | 309139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g02156 | 777 | MobiDBLite | consensus disorder prediction | 652 | 666 | - | - | |
Cma14g02156 | 777 | Pfam | CCT motif | 722 | 764 | IPR010402 | GO:0005515 | |
Cma14g02156 | 777 | SMART | REC_2 | 112 | 227 | IPR001789 | GO:0000160 | |
Cma14g02156 | 777 | Gene3D | - | 113 | 270 | - | - | |
Cma14g02156 | 777 | MobiDBLite | consensus disorder prediction | 745 | 777 | - | - | |
Cma14g02156 | 777 | MobiDBLite | consensus disorder prediction | 745 | 763 | - | - | |
Cma14g02156 | 777 | ProSiteProfiles | Response regulatory domain profile. | 113 | 231 | IPR001789 | GO:0000160 | |
Cma14g02156 | 777 | CDD | psREC_PRR | 114 | 217 | - | - | |
Cma14g02156 | 777 | MobiDBLite | consensus disorder prediction | 647 | 666 | - | - | |
Cma14g02156 | 777 | ProSiteProfiles | CCT domain profile. | 722 | 764 | IPR010402 | GO:0005515 | |
Cma14g02156 | 777 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 84 | 755 | IPR045279 | GO:0009736 | |
Cma14g02156 | 777 | MobiDBLite | consensus disorder prediction | 491 | 517 | - | - | |
Cma14g02156 | 777 | Pfam | Response regulator receiver domain | 114 | 225 | IPR001789 | GO:0000160 | |
Cma14g02156 | 777 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 | 84 | 755 | - | - | |
Cma14g02156 | 777 | SUPERFAMILY | CheY-like | 112 | 237 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00464 | Cma-Chr3:4713442 | Cma14g02156 | Cma-Chr14:14772231 | 1.26E-15 | dispersed | |
Cma07g00944 | Cma-Chr7:4542001 | Cma14g02156 | Cma-Chr14:14772231 | 1.29E-16 | dispersed | |
Cma14g02156 | Cma-Chr14:14772231 | Cma13g01146 | Cma-Chr13:8431403 | 3.66E-13 | dispersed | |
Cma14g02156 | Cma-Chr14:14772231 | Cma15g00995 | Cma-Chr15:5988212 | 1.11E-23 | wgd | |
Cma14g02156 | Cma-Chr14:14772231 | Cma02g01147 | Cma-Chr2:6760695 | 3.04E-26 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
36362 | PF00072 | Response_reg | 1.10E-18 | CL0304 | Cma | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g02156 | K12130 | - | qsu:112004762 | 535.413 |