Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02165 ATGGAAACTGGATCACAAATATCAGGCCTTCCCAGTTATCAACTTCAACTCTCCTTCCACCTCTCAAATGCACCTCCTCTTCCCCAACCCATCCACCAAATGGGATTCGTTCACTTCCAAGACCACACCCAGGTTTTGAGCTTCTTGTCACCCAATAGCGCCGCCACCGCCACCATGCCACCTGCCTTTACAACTTCTGCTCACGCCCATCTCATTAGTAGACCTTCTTGGAGCAACGAGCAGGTGGGAACACAGGATCCGAAGCCCGGCAACGACGAGAACTGCAATGGTAGCGCTAGCGACGGCAGCAATTCATGGTGGAGAAGCACAAATGCAGATAAGAGTAAAGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTGCTCGACGATGGCTATAAATGGAGAAAATATGGCCAGAAAGTCGTCAAGAACAGCCTTCATCCTAGAAGCTACTACCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTGGAGCGACTGTCGGAAGATTGCCGGATGGTGATAACCACGTACGAAGGTAGACACAACCACTCCCCTTGCGACGACTCCAATTCTTCGGAGCACGAGCCCTTTACATCCTTTTGA 642 51.09 METGSQISGLPSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNSAATATMPPAFTTSAHAHLISRPSWSNEQVGTQDPKPGNDENCNGSASDGSNSWWRSTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14852671 14854096 + CmaCh14G021650.1 Cma14g02165 309148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02165 213 Gene3D WRKY domain 125 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g02165 213 MobiDBLite consensus disorder prediction 194 213 - -
Cma14g02165 213 MobiDBLite consensus disorder prediction 76 109 - -
Cma14g02165 213 ProSiteProfiles WRKY domain profile. 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02165 213 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g02165 213 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 209 IPR044810 GO:0003700
Cma14g02165 213 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02165 213 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g02165 213 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 27 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00592 Cma-Chr2:3501164 Cma14g02165 Cma-Chr14:14852671 3.55E-47 dispersed
Cma06g00935 Cma-Chr6:6317907 Cma14g02165 Cma-Chr14:14852671 2.55E-88 dispersed
Cma14g02165 Cma-Chr14:14852671 Cma20g01105 Cma-Chr20:8639205 1.31E-47 dispersed
Cma14g02165 Cma-Chr14:14852671 Cma03g01052 Cma-Chr3:7258119 6.50E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36366 PF03106 WRKY 1.30E-24 CL0274 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02165 - - cmax:111472906 366.696