Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g02166 ATGAGTCGCTCACTGCTACAGTTGCGTTCCGCATTCCATTTTCCACCCAAAGCAAAAACCAAAACAAAACACCACACCCATAGCCATAGCCATAATCTTCCTTTCCCAAAAGCCTCCTACTCCGACTTGCTGCACCACACCAGGACTACCCCAGCTGCCTCTTCTCCTTTCCTCCACCTTGTAGAAGCCTGCCATCGCCGATTTGTTCATCCTGCTCCTCTTCTCCTCCTACCAGATTCTTTTTTCACTTGGAAGTTTCTCTATGTGATGACACAAGTCACTGGACATGAAGAGGATTCCAGAGTCAAAAACACTTCCGTTATTACTGCCCATAGAGATGCTTCCAGAATCAAAGCCAAGCAAGCTGGCCATTGGTCGAATATGCACTCAGCTAAGGTAAGAGACGTGGGAAGATCAATTGGACAAGGACTTCAAGATCCAGAAGTTTCTGCACCTATACGGACATCAAAGGGAAAATCCTCTTTCTTGGGTCAGGAAGAACCAAAGCGTGGTGTCACTTTAAAGGGTAGTAGATCTTTATTTGAGGAAGATAGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCGCCAGAGCCCGTGGATATGGATCTAATGAGAACTGTTTATGTACCCATAGGACAAAATAAACCAGACCCCTGTTGCTTGATGAAGAGTTTTTCCGTGAATGGCCCCTTTCTTGAGGATCTTTCAATCCGGGTTCCAGCCAAGAAACCGAGCCCTGCTGCTCTCTCTCCTGCAGAAAGCTTAGTTGAAGAGCCGCATGACTTGGGTGTTTTATCTACCCCCTTTTCAATTCCTCGTGCATCACAAATTACAGAAATCTCTCTCCTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGATAGTAGCGGAGTTGTCACAGCTATGAGCATAGTTAATAGCTGTTCTAGCACATACCGAAGTGATGGAATGAGTATTGAAAGGAACTGTGAGAGTACTAAAGGAAGCATTAGAGGAGACTCTCTCGAGAGTGCAAAAACAAGTATTAGTCGAGCTAGTGATAGCAGTGGTCTCAGTGATGATAGTTGTTGGAGCAACATTACAGGAAGTGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAACCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTACCTCTCAGAGCTAAGTGGGACTCGCTGTTTTTTTGCAATGAAAGTAATGGACAAGGCATCACTTGCTATAAGGAAGAAGTTAACGAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACGTTGTACACCCATTTTGAAACCGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACTTTGAGGCAACGGCAGCCAGGGAAACACTTTTCTGAGTATGCTGCGAGGTTTTATGCAGCAGAGGTTTTACTGGCCCTCGAGTATCTTCACATGCTGGGAGTTGTTTACAGAGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTTGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTAATAAAAACCTCACATGATTCTGACCCATCGAAACGAGCTGCATTCTGTGTCCAGCCTGCCTGTATCGAGCCATCATCAGCTTGCATCCAACCTGCATGCTTTATTCCACGACTCTTCCCTCAGAAAAGCAAAAAGAGAAGTCCCAAGCCTCGAAGCGAGCTAAGGTTGCAATCCAGTACTTTTCCTGAGCTGGTGGCAGAGCCGACCGCCGCCCGATCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATCATTAAAGGAGAGGGACATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTGTATGGAAAAACCCCATTCAAAGGATCAGGAAACAGAGCCACACTATTCAATGTCGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTGCTAGTAAAGGAGCCACAACATCGGCTCGGAGTTAAGAGGGGAGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCTATGGAGGCCGAACTGCCCAAGTTTGGGGTAGTTGACGCAACAGGCGTTAGCAGCAGCAGTAAGAGGATGGTTGGCACAGATGATGTCAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 2409 46.41 MSRSLLQLRSAFHFPPKAKTKTKHHTHSHSHNLPFPKASYSDLLHHTRTTPAASSPFLHLVEACHRRFVHPAPLLLLPDSFFTWKFLYVMTQVTGHEEDSRVKNTSVITAHRDASRIKAKQAGHWSNMHSAKVRDVGRSIGQGLQDPEVSAPIRTSKGKSSFLGQEEPKRGVTLKGSRSLFEEDSPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDPCCLMKSFSVNGPFLEDLSIRVPAKKPSPAALSPAESLVEEPHDLGVLSTPFSIPRASQITEISLLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCSSTYRSDGMSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSCWSNITGSANKPHKGNDPRWKAILAIRARDGILGMNHFRLLKRLGCGDIGSVYLSELSGTRCFFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSHDSDPSKRAAFCVQPACIEPSSACIQPACFIPRLFPQKSKKRSPKPRSELRLQSSTFPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDATGVSSSSKRMVGTDDVKSGGQYLDFEFF 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14854695 14861838 - CmaCh14G021660.1 Cma14g02166 309149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g02166 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Cma14g02166 802 Pfam Protein kinase domain 639 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02166 802 Pfam Protein kinase domain 411 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02166 802 Coils Coil 802 802 - -
Cma14g02166 802 MobiDBLite consensus disorder prediction 142 198 - -
Cma14g02166 802 CDD STKc_phototropin_like 409 761 - -
Cma14g02166 802 ProSiteProfiles Protein kinase domain profile. 410 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g02166 802 PANTHER FLIPPASE KINASE 1-RELATED 133 802 - -
Cma14g02166 802 SUPERFAMILY Protein kinase-like (PK-like) 392 769 IPR011009 -
Cma14g02166 802 Gene3D Transferase(Phosphotransferase) domain 1 494 567 - -
Cma14g02166 802 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 133 802 - -
Cma14g02166 802 Gene3D Phosphorylase Kinase; domain 1 408 493 - -
Cma14g02166 802 Gene3D Transferase(Phosphotransferase) domain 1 638 759 - -
Cma14g02166 802 MobiDBLite consensus disorder prediction 341 368 - -
Cma14g02166 802 SMART serkin_6 410 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g02166 Cma-Chr14:14854695 Cma18g00622 Cma-Chr18:5507489 0 dispersed
Cma14g02166 Cma-Chr14:14854695 Cma06g00937 Cma-Chr6:6329480 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69119 PF00069 Pkinase 6.80E-36 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g02166 - - csv:101217551 1283.47