Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00074 ATGGGTATGTGTAATGAGAAACTTGTGGGCTTTTTGAACAATAGGTGGTTGGTTTTTGTGGCTGCAATATGGGTTCAATCTTGCGCGGGAATTGGGTATCTCTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAGTCAGAGGCAAATTGCGCGGCTCGGTGTGGCGAAAGATCTTGGCGATAGTGTCGGTACTCTAGCCGGAACCTTGTTGGAGATATTGCCCTTCTGGGCAACTATGTTGGTCGGTGCTATCAGTAACTTTGTCGGGTATGGTTGGATTTGGCTCATCGTCATTGGTCGAGCTCCAGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTGTGGGAACGAATGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTTGCGTACAAAACTTTCCAAAAAGCAGGGGTCCTGTGGTTGGGATTTTGAAAGGCTTTGCTGGTTTAAGCGGTGCAATCTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCGATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGCTTGATGTTTTTTATCAAACCTGTTGCCGGCCATAGGCAAGTGCGGCGGTCTGACACCATGAGCTTTACTACTGTTTATGGCGTCTGCCTCCTCTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCTCCACTGTGATAGCCATTTTCACTGCTGTTATGTTTGTCATCCTTCTTATTCCCTTTTTGATTCCGGTGGCGTCGACTTTGAGCTCAGAGACGACAACATATGCTGGGCAAGAGGCTCTCCTACAACCGTTACACAGACAGGAACCTGCTACATCTGAAGCAGATGGTAATGAAGTGATATTAAGTGAGGTGGAAGATGAAAAATCAGAGGTAGAGGACTCAGTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTGCAGAGGAGGAAGGGTCCACGTAGAGGGGAAGATTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTCTCTCCCATCTCCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCGAGTCCTTAGGCTATGATAATACACATATTTTTGTGTCCCTCATCAGCATATGGAACTTCCTCGGCCGTGTTGGTGGTGGCTACCTCTCTGAGATTGCTGTGAGAGATTATGCTTATCCAAGACCCATTGCAATGGTGATTGCGCAAATCCTTATGATATTTGGACATCTCTTCATCGGAATGGGATGGCCTGGAGCAATGTACATTGGAACTCTCATAACAGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGGTTGAAAAAGTTTGCTGCTTTATACAATTTCATCACTCTCTCTACTCCCATGGGATCTTTGATATTTTCTGGGTTAATCACGAGCAGCATCTATGATAAGGAAGCAGAGAAGCAAGCTCTCAATCATCTCTCACAGCTGCAGAGCTCCGCTGGACCGCTCAAGTGCGTGGGCACCATATGTTTCTCTCTAACTTGTATCATAATGGCTGTTTTCTGCGCCATTGCAGGCATCTTAAGTTTGGTTTTGGTTCACCGAACCAGGGGTGTTTACTACAACCTCTATGGAAAATCTCGTTCATCCACGCTTTGTGTAAACTAG 1767 45.95 MGMCNEKLVGFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYSQRQIARLGVAKDLGDSVGTLAGTLLEILPFWATMLVGAISNFVGYGWIWLIVIGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSADLIFMIAVGPALVAIGLMFFIKPVAGHRQVRRSDTMSFTTVYGVCLLLAAYLMGVMLVEDLVTLSSTVIAIFTAVMFVILLIPFLIPVASTLSSETTTYAGQEALLQPLHRQEPATSEADGNEVILSEVEDEKSEVEDSVPASERQKRIAQLQAKLLQAAAEGAVRVQRRKGPRRGEDFTLGQALIKADFWLIFLSHLLGSGTGLTVIDNLGQMSESLGYDNTHIFVSLISIWNFLGRVGGGYLSEIAVRDYAYPRPIAMVIAQILMIFGHLFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFAALYNFITLSTPMGSLIFSGLITSSIYDKEAEKQALNHLSQLQSSAGPLKCVGTICFSLTCIIMAVFCAIAGILSLVLVHRTRGVYYNLYGKSRSSTLCVN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 358409 361140 + CmaCh15G000740.1 Cma15g00074 309224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00074 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 581 - -
Cma15g00074 588 CDD MFS_Mch1p_like 15 558 - -
Cma15g00074 588 SUPERFAMILY MFS general substrate transporter 211 571 IPR036259 -
Cma15g00074 588 SUPERFAMILY MFS general substrate transporter 11 203 IPR036259 -
Cma15g00074 588 Pfam Nodulin-like 15 262 IPR010658 -
Cma15g00074 588 Gene3D MFS general substrate transporter like domains 364 574 IPR036259 -
Cma15g00074 588 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 581 - -
Cma15g00074 588 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cma15g00074 588 Coils Coil 300 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00163 Cma-Chr1:740019 Cma15g00074 Cma-Chr15:358409 1.07E-57 dispersed
Cma14g01365 Cma-Chr14:10596292 Cma15g00074 Cma-Chr15:358409 5.63E-116 dispersed
Cma15g00074 Cma-Chr15:358409 Cma20g00761 Cma-Chr20:3590690 3.62E-114 dispersed
Cma15g00074 Cma-Chr15:358409 Cma04g02976 Cma-Chr4:19524017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00074 - - csv:101211655 981.474