Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00075 ATGGCCATGGGAGCTTTATGGAGGGCTTTGGTTCTGGCTGTGGTTCTTGTGGCGGCTACTGTGGAGAGAACAGACGCACAATTAGTAGAGAATTTCTACGCCTCCACTTGTCCAAACGTGGAGCGAATCGTTACACAAGCTGTTCAAAACAAGTTTGATCAAACGTTCGTCACCGTCCCTGCAACTTTGCGACTCTTCTTCCATGATTGCTTCGTTGAGGGGTGTGATGCTTCGGTGTTGATAGCATCTCCAAATGGGGATGCCGAGAAAGACGCTCAAGACAATATTTCATTAGCTGGAGATGGATTTGACACGGTTATTAAAGCTAAACAAGCAGTTGAAAGTGCTTGTCCCGGTGTTGTCTCTTGTGCTGACGTTTTGGCTCTTGCAACTAGAGATGTCGTTAATTTGGCAGGGGGCCCACTGTACAGCGTGGAACTAGGACGTCGAGATGGGCTAATTTCCCGAGCATCCCGAGTGGCCGGAAACTTACCGGAACCATTCTTCAATCTGGACCAACTGGTCAACATGTTCGCCGCCCACAACCTGACCCTCATCGACATGATCGCACTCTCCGGAGCCCACACCTTGGGCTTCTCCCACTGCGACCGTTTCTCCAACCGTCTCTACTCCTTTTCCCCTTCGTCTCCGGTGGACCCGTCGTTGGACCCCGGCTACGCGCAGCAGCTAATGGATGCGTGTCCGCGGAACGTGGATCCCAGCATAGCCATAGACATGGATCCTATAACCCCTCGGACCTTCGACAACGTTTACTACCAGAACCTTATCGCCGGCAAGGGCCTCTTCACTGCCGACCAGATTCTGTTCACGGAGTCCGAATCCCAGCCGACAGTCCGCAGCTTCGCCACCAACGGGGCTGAGTTTAATGCGGCGTTTATCAACGCCATGACCAAGATGGGTCGGATTGGAGTTAAGACTGGTGATGATGGTGAAATTCGAATGGATTGCAGTGCCTTTAATTCCTAA 987 51.98 MAMGALWRALVLAVVLVAATVERTDAQLVENFYASTCPNVERIVTQAVQNKFDQTFVTVPATLRLFFHDCFVEGCDASVLIASPNGDAEKDAQDNISLAGDGFDTVIKAKQAVESACPGVVSCADVLALATRDVVNLAGGPLYSVELGRRDGLISRASRVAGNLPEPFFNLDQLVNMFAAHNLTLIDMIALSGAHTLGFSHCDRFSNRLYSFSPSSPVDPSLDPGYAQQLMDACPRNVDPSIAIDMDPITPRTFDNVYYQNLIAGKGLFTADQILFTESESQPTVRSFATNGAEFNAAFINAMTKMGRIGVKTGDDGEIRMDCSAFNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 360910 362702 - CmaCh15G000750.1 Cma15g00075 309225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00075 328 Gene3D Peroxidase, domain 2 165 306 - -
Cma15g00075 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cma15g00075 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 Gene3D - 31 327 - -
Cma15g00075 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cma15g00075 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Cma15g00075 328 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PANTHER PEROXIDASE 10 328 - -
Cma15g00075 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00075 328 PANTHER - 10 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00660 Cma-Chr7:2885001 Cma15g00075 Cma-Chr15:360910 7.10E-146 dispersed
Cma15g00075 Cma-Chr15:360910 Cma20g01022 Cma-Chr20:7265817 3.64E-144 dispersed
Cma18g00396 Cma-Chr18:2168011 Cma15g00075 Cma-Chr15:360910 1.55E-95 transposed
Cma15g00075 Cma-Chr15:360910 Cma04g02975 Cma-Chr4:19523308 5.32E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00075 K00430 - csv:101213580 546.584