Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00156 ATGGAATCCCAGAAACAAAATCTCAGTGCTCGAAAACCCTTCTCGGATTGTACCAATACCATCGTCTCCTCGCAATCGTCTGCTTCCAATTTCTCCGCTCCAATCAAACCGTGCAAGCGTGTAATTAAGTCTGCGGTTGAAGATGATGTCAACATTCAGAAGAAAGGCGAGCCAAGTTTTCCGTCTGAATCTACATCCCTTAATTTGCGAGTTTCAAACCCTAGTTCTGATTCTCTTCCTACAGAACCTATCTCTGATTTTAATCCTGTAGAAACAAACCCTACTTCTGATTCTCTTCCTCCAGAACCTAGTTCTCGCCGTCTTCCTACGGAAGCCTCCACTCCTTCGCGGCGTACTGATTTGTCGTCTCGTTCAGGAACCGATCGCGTTCCGGAGCCCCAGTCCTTCTACAGTCGAAGGTGCCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTCCACCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGGGGTGAAAGAAGAGATGGATACAGTAGCACATCCAAAGCAAGAACCGTTCCTTATAGCAAGAGGCAGTGTGCTATAATTTATGGGGAAGATGAGTCCAATGTTGAGCTTCCACGGGAATTTGTTGAACATAAGAAGGCATATTTTTCAGAAGTAGATGCGTTTGAACTACCAGAGGAGGAGGCTAAATCATCCGACTCAGAAGCTTGTGGGTTCTTAGCAATGGCTGATTCAGGATTCAGAGGAGTTTTGATTTTGAGTTTGGGTTTGGGTTTGTTTATGCTCTTTTTGGGCACTGCCTCAGCTCAACTCTCAACTGGTTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAAACCTCTGTTCGATCTGCTGTCTCCAAAGAAGCTCGCATGGGGTCTTCCATTCTTCGCTTGTTTTTTCACGACTGTTTCGTCAATGGATGCGATGGGTCAATTCTGTTAGACGATACATCGAGCTTCACTGGAGAGAAAAATGCTAACCCGAACCGAAACTCTGCTAGAGGCTTTGATGTCATCGATAACATCAAAACCGCGGTTGAAAATGCTTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTAGCCATTGCTGCTCGTGACTCTGTTGTTCTTCTAGGAGGGCCAAGCTGGAATGTGAAGTTGGGTAGAAGAGACGCCACAACTGCGAGCCAGTCCCAAGCCAACAGCGACATCCCCGCGCCAACTTCAACTCTTAGCCAACTCACCTCTAGATTCAGCGCTCTCGGCCTCTCCAACACAGACTTGGTGCACAACATTCAGAGTACATTTGCAACAACAAGGCAAGGCAATTGCCCCAGTGCCTCAGGCTCCGGCGACGACAATTTGGCTCCTCTGGATTTACAAACTCCAAACTCTTTCGACAACAATTACTTCAAGAACCTTCTTCAGAACAAGGGGCTCCTACAATCAGATCAAGTTCTCTTCAATGGCGGATCTACAGACTCCACTGTCCAAAACTACGCCAAGGCCCCTGCCCGTTTCTTCTCTGATTTTGCTGCCGCCATGGTCCGGATGAGCGACATTAGTCCTCTTACTGGCTCCAATGGCGAAATTAGGAAGAACTGCCGGAAGGTTAATTAA 1626 46.62 MESQKQNLSARKPFSDCTNTIVSSQSSASNFSAPIKPCKRVIKSAVEDDVNIQKKGEPSFPSESTSLNLRVSNPSSDSLPTEPISDFNPVETNPTSDSLPPEPSSRRLPTEASTPSRRTDLSSRSGTDRVPEPQSFYSRRCPTNKRKSVEIAVPPFIFSTASKIQTGGERRDGYSSTSKARTVPYSKRQCAIIYGEDESNVELPREFVEHKKAYFSEVDAFELPEEEAKSSDSEACGFLAMADSGFRGVLILSLGLGLFMLFLGTASAQLSTGFYSSSCPNLLSTVKTSVRSAVSKEARMGSSILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVENACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPAPTSTLSQLTSRFSALGLSNTDLVHNIQSTFATTRQGNCPSASGSGDDNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSTVQNYAKAPARFFSDFAAAMVRMSDISPLTGSNGEIRKNCRKVN 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 723795 729033 + CmaCh15G001560.1 Cma15g00156 309306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00156 541 PANTHER PEROXIDASE 72-RELATED 433 541 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 MobiDBLite consensus disorder prediction 48 143 - -
Cma15g00156 541 PANTHER PEROXIDASE 72-RELATED 248 431 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 SUPERFAMILY Heme-dependent peroxidases 269 541 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 Gene3D - 274 406 - -
Cma15g00156 541 ProSiteProfiles Plant heme peroxidase family profile. 269 541 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 Gene3D Peroxidase, domain 2 433 520 - -
Cma15g00156 541 Gene3D Peroxidase, domain 2 407 431 - -
Cma15g00156 541 MobiDBLite consensus disorder prediction 1 33 - -
Cma15g00156 541 Gene3D - 521 541 - -
Cma15g00156 541 Pfam Peroxidase 286 504 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PANTHER PEROXIDASE 248 431 - -
Cma15g00156 541 PANTHER PEROXIDASE 433 541 - -
Cma15g00156 541 MobiDBLite consensus disorder prediction 1 36 - -
Cma15g00156 541 PRINTS Plant peroxidase signature 515 528 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 279 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 303 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 343 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 475 492 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 459 474 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Plant peroxidase signature 362 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Haem peroxidase superfamily signature 363 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Haem peroxidase superfamily signature 301 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Haem peroxidase superfamily signature 381 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 PRINTS Haem peroxidase superfamily signature 461 476 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma15g00156 541 MobiDBLite consensus disorder prediction 57 142 - -
Cma15g00156 541 CDD secretory_peroxidase 269 540 IPR033905 GO:0004601|GO:0042744
Cma15g00156 541 ProSitePatterns Peroxidases active site signature. 301 312 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00156 Cma-Chr15:723795 Cma20g00313 Cma-Chr20:1550512 2.45E-120 dispersed
Cma15g00156 Cma-Chr15:723795 Cma04g02874 Cma-Chr4:19109698 3.35E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00156 K00430 - csv:101218447 491.886