Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00198 ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCACATCTTCCTCATCTCCTACATCTTCTGAGCCTAATCAGTCTGGCGAACCTCCTTCATCATCTTCTAGTTCTTCAGCTCCGCCTCCTCATTCACCACCACCAGCAGTTTCTGATGCTCCTCCTCCTTCTCCTCCATTGACAGCATCACCACCTGCACCACCAACATCCCCTCCTTCTCCCCTTGCTGGTTCACCGTCTTCGCCTCCGCAATCTTCGGCCTCACCGCCGCCACCTTCAACATCAACCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACGTCAACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCGCCGCCACCAGCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCACCTTCTACTCCCCCTCCCCCTCCCCCTGATATTATTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACACCACCTTCACCAACAGGAGAATCACCTAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTCTCCAACCATTTCATCAGGGGGAAGTCCTGTTACCCCTTCAACTTCAGTTACACCAGAACGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGTCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTGAGAGCCCAATCTTTAGCTAATGTGGTTGGAAGTCGAAACGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGAAGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTGAAAACAGGACAGTTTTGGCTTGGGCTTCACGTGTTCGAATTGCTTCTGGTGCAGCCCGTGGAATTGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCATTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGATACATGGCGCCAGAGTATGCAACAAGTGGGAAATTGACTGATAAATCTGACGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGTCTGTAGATTCTTCTCAGCCCCTGGGAGATGAGAGCTTAGTTGAATGGGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTTCGAATGATCGAAGCAGCCGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCAAATGGGGTGAAACCTGGACAGAGTGAAGTGTTTGATTCAGCTGAACATTCGGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGATCGAGATCGAGATCGAGATCAGAGTCGAAGTTATAGTCAAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCAAATAATCGATCCCGGCACGTCTGA 2349 48.36 MASPSPSPAAESATSSSSPTSSEPNQSGEPPSSSSSSSAPPPHSPPPAVSDAPPPSPPLTASPPAPPTSPPSPLAGSPSSPPQSSASPPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPPPAAGGSPPPLSNPRPPPSTPPPPPPDIISPSPPPSANVPTPPSPTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSSVPSSSAPPPVSDPGSPTISSGGSPVTPSTSVTPERPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVSSPFSSQNSDAFFLRAQSLANVVGSRNDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGENRTVLAWASRVRIASGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRDRDQSRSYSQSQSSWSRESRDQSPSVPNNRSRHV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 963133 967855 - CmaCh15G001980.1 Cma15g00198 309348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00198 782 MobiDBLite consensus disorder prediction 1 318 - -
Cma15g00198 782 MobiDBLite consensus disorder prediction 35 280 - -
Cma15g00198 782 MobiDBLite consensus disorder prediction 740 782 - -
Cma15g00198 782 MobiDBLite consensus disorder prediction 281 318 - -
Cma15g00198 782 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 129 758 - -
Cma15g00198 782 Pfam Protein tyrosine and serine/threonine kinase 425 696 IPR001245 GO:0004672|GO:0006468
Cma15g00198 782 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 129 758 - -
Cma15g00198 782 MobiDBLite consensus disorder prediction 755 782 - -
Cma15g00198 782 SUPERFAMILY Protein kinase-like (PK-like) 406 696 IPR011009 -
Cma15g00198 782 SMART serkin_6 423 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00198 782 Gene3D Phosphorylase Kinase; domain 1 395 498 - -
Cma15g00198 782 Gene3D Transferase(Phosphotransferase) domain 1 499 716 - -
Cma15g00198 782 ProSiteProfiles Protein kinase domain profile. 423 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00198 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Cma15g00198 782 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Cma15g00198 782 CDD STKc_IRAK 429 699 - -
Cma15g00198 782 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02839 Cma15g00198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00070 Cma-Chr1:300554 Cma15g00198 Cma-Chr15:963133 7.80E-98 dispersed
Cma04g01554 Cma-Chr4:7874847 Cma15g00198 Cma-Chr15:963133 1.25E-176 dispersed
Cma04g01733 Cma-Chr4:8715449 Cma15g00198 Cma-Chr15:963133 1.34E-173 dispersed
Cma11g01810 Cma-Chr11:12102734 Cma15g00198 Cma-Chr15:963133 7.27E-74 dispersed
Cma14g01270 Cma-Chr14:10054936 Cma15g00198 Cma-Chr15:963133 2.62E-98 dispersed
Cma14g01360 Cma-Chr14:10571451 Cma15g00198 Cma-Chr15:963133 1.49E-91 dispersed
Cma15g00198 Cma-Chr15:963133 Cma18g00798 Cma-Chr18:7019254 3.20E-170 dispersed
Cma20g00495 Cma-Chr20:2417209 Cma15g00198 Cma-Chr15:963133 2.54E-72 transposed
Cma15g00198 Cma-Chr15:963133 Cma18g01062 Cma-Chr18:8802449 0 wgd
Cma15g00198 Cma-Chr15:963133 Cma04g02839 Cma-Chr4:18961285 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69127 PF07714 PK_Tyr_Ser-Thr 7.00E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00198 - - csv:101211665 798.89