Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00205 ATGAAGAGAACTGAGGCTACTGCTTCCTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGCTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTCTGATGGGTATTAAAGCTTCACTTCAAGATCCCCATGGCGTGCTTGAGAATTGGGATGGAGACTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCCCCTGACAGCCTTGTCATTGGCCTAGGGACTCCAAGTCAGAACCTGTCTGGGACTCTTTCTTCAAGCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATTACAGGCCCAATCCCCCCAGAGCTTGAGAGGCTCTCAAAGCTCCAAACACTTGATCTATCAAGCAATTTCTTCACAGGGAAAATTCCTTCTTCTCTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTGTAGCTAACATGACACAGCTTGTGTTTCTCGATGTGTCTTATAATAATATCAGTGGCCCTCTCCCCAGATTTCCCAGCAAAACGTTCAACATTGTTGGAAATCCTCTGATCTGTGCAACTGGGTCCGAGGTCAGTTGCCACGGTTCAACTCTAATGCCCATGTCCATGAACTTGAACAGTACACAAACTGGTTTACCTGCTGTGAGATTGAAAAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGCGAAGACGAAGCAATCGCCCGACGTTTTTCGATGTAAAAGACGGACAACATGAGGAAATTTCGCTTGGAAATCTGAGAAGGTTCCAATTTAGACAACTTCAGATAGCAACAAACAACTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGACTTCTTTCAGATGGAACGGTTGTAGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGTAGAGGTGATATCCAATTTCAGACTGAAGTCGAGATGATCAGCCTAGCCGTGCACCGTCATCTCCTCCGACTGTACGGGTTTTGCAACACACCAACCGAAAGGATTCTTGTTTACCCGTATATGTCTAATGGAAGCGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGAATTGCTATAGGAGCTTCAAGGGGATTGTTATACCTCCATGAACAATGTGACCCAAAGATCATACATAGAGACGTTAAGGCTGCAAACATATTGCTCGACGACTACTGCGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTCGACCACCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGTCATATAGCTCCCGAGTATCTCTCCACTGGGCAGTCATCCGAGAAAACAGACGTTTTTGGATTTGGAATTCTACTCCTTGAACTGATCACAGGGCAGAAAGCCCTTGAGTTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGAATGGGTGAAGAAGATTCACCAGGAGAAGAAGCTGGAAGTGCTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAGCTAGAGGAGATGGTTCAAGTGGCTCTGTTGTGTACACAATACCAACCAGGACACAGACCAAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTCAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCTCATGATTTCTCTTCATCTGACAGATACTCTGATCTCACAGATGACTCATCCTTGTTGGTCCAAGCCATGGAGCTCTCTGGTCCAAGAGCGTTGAAGCTCCACAACGGTTTTGTTATTCTCTCGTTCTCTAATTGTATAGATCCGCTTGATAACGATTTTGTTTTAGTTCTCTGTTTAGGAAAATTAAGCTATGCTCTCTTTGTTTAG 1992 44.43 MKRTEATASCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPDSLVIGLGTPSQNLSGTLSSSIGNLTNLQIVLLQNNNITGPIPPELERLSKLQTLDLSSNFFTGKIPSSLGHLRSLQYLRLNNNSLSGVIPMSVANMTQLVFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEVSCHGSTLMPMSMNLNSTQTGLPAVRLKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRSNRPTFFDVKDGQHEEISLGNLRRFQFRQLQIATNNFSSKNILGKGGFGNVYKGLLSDGTVVAVKRLKDGNASRGDIQFQTEVEMISLAVHRHLLRLYGFCNTPTERILVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGASRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALEFGKAANQKGGILEWVKKIHQEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYQPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPRALKLHNGFVILSFSNCIDPLDNDFVLVLCLGKLSYALFV 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1002463 1005801 + CmaCh15G002050.1 Cma15g00205 309355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00205 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Cma15g00205 663 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Cma15g00205 663 ProSiteProfiles Protein kinase domain profile. 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00205 663 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Cma15g00205 663 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00205 663 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Cma15g00205 663 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Cma15g00205 663 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Cma15g00205 663 SUPERFAMILY L domain-like 33 196 - -
Cma15g00205 663 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 7 624 - -
Cma15g00205 663 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Cma15g00205 663 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 624 - -
Cma15g00205 663 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Cma15g00205 663 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02831 Cma15g00205 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00444 Cma-Chr10:2008732 Cma15g00205 Cma-Chr15:1002463 0 dispersed
Cma11g00435 Cma-Chr11:2124893 Cma15g00205 Cma-Chr15:1002463 0 dispersed
Cma15g00205 Cma-Chr15:1002463 Cma18g01070 Cma-Chr18:8860581 0 wgd
Cma15g00205 Cma-Chr15:1002463 Cma04g02831 Cma-Chr4:18924345 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69128 PF00069 Pkinase 3.20E-44 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00205 - - cpep:111808464 1226.46