Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00297 ATGAAGATCTCCAACTTCTTCTTCACATGGCTGTCGCTGGATCGTCTTCTTTTTCTTCTTCTACTTTGTGCTTCTCCATCTTTTTGTGTAGTTCTAGAAGACGACATAAGGTGCCTTCGAGGGGTTAAGAATGCGCTCGTTGATCCACTCGGAAGGCTTAGTTCTTGGGATTTCAAGAACACATCTGTTGGCTATCTCTGTAACAAATTTGTGGGTCTCTCCTGCTGGAACGACCGTGAGAATCGCATTCTGAGCCTCGAGCTTAGAGATATGAAGCTTTCCGGTTCGATTTCTGAGGACTTGCAGTACTGTGTGAGTCTGCAGAAAATGGATCTGTCCGGGAATAGCTTTTCCGGTGCGATCCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTAGCATAGATTTGTCGAACAATCAATTTACCGGCCTTATTCCGGCTGATCTCGCCGGGTGTTCTTATCTCAATTCGTTGATTTTGTCTGATAATGGCCTTTCTGGTACAATACCAGTTGAGCTCACGAGTTTGGGTAGGCTTAACAAGTTTTCCGTTGCGAACAATCATCTCACTGGAACGATTCCCTCCTTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCGAGTTGTGGCGGGTTGAGCAAGAAGAATCTTGCGATCATTATAGCTGCTGGTGTGTTTGGTGCTGCGGCTTCTCTGTTGTTAGGTTTTGGGTTGTGGTGGTGGTATCAATCTAGAATGAACATGAAGAAGAGAAGGGGATATCGGGATGGAATTAGTGGGGATTGGGCTGATAGATTGAGAGCCTATAAGCTTGTTCAAGTTTCCTTGTTTCAGAAGCCTCTTGTGAAAGTTAAATTGGCTGATTTGATGGCTGCTACTAACAATTTCAATTCTGAAAATATTATAGTTTCTTCTAGAACTGGGACTACTTATAGAGCTGTTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACCTGCAAGCTCGGTGAGAAGCTGTTTCGAATGGAGATGAACCGGTTAGGATTGATAAGGCACCCGAATTTGACACCCCTTTTGGGGTTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGTACTTTGTCCTCTTTGTTACATGGAAATGGTGAGATATTGGATTGGCCAACTAGGTTTAGGATCGGTTTGGGTGCGGCCAGGGGTCTTGCTTGGCTTCATCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGAAGACTATGATGCTAGGATCATGGATTTTGGATTAGCAAGGTTGATGTCTTCAGATTCTCACGACAGTAGTTTTGTAAATGGAGATTTAGGGGAGCTTGGTTACATCGCTCCCGAATATCCGAGCACCATGGTTGCTTCTCTGAAGGGGGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGCCAAAATCCTCTAGAAGTCACTAAAGCAGAGGAAGGCTATAAGGGTAACTTGGTGGATTGGGTTAATCAGCTAAGTATTTCGGGTCGAATTAAGGATGTTATTGATAAAGATCTTTGTGGGAAAGGGAGCGATGAGGAAATCTTACAATTTATGAAAATTACAATGAACTGCGTTGTTTCTCACCCCAAGGATAGTAATCTTCTTTTTAATACTGTGTTTGAGAAATTGACCAGAGAGGCCATGGGTGTGTCTAAAGAAGGTGAGAGATGA 1782 43.32 MKISNFFFTWLSLDRLLFLLLLCASPSFCVVLEDDIRCLRGVKNALVDPLGRLSSWDFKNTSVGYLCNKFVGLSCWNDRENRILSLELRDMKLSGSISEDLQYCVSLQKMDLSGNSFSGAIPPHICKWLPYLVSIDLSNNQFTGLIPADLAGCSYLNSLILSDNGLSGTIPVELTSLGRLNKFSVANNHLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYQSRMNMKKRRGYRDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRLGLIRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLSSLLHGNGEILDWPTRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARIMDFGLARLMSSDSHDSSFVNGDLGELGYIAPEYPSTMVASLKGDVYGFGVVLLELVTGQNPLEVTKAEEGYKGNLVDWVNQLSISGRIKDVIDKDLCGKGSDEEILQFMKITMNCVVSHPKDSNLLFNTVFEKLTREAMGVSKEGER 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1391433 1394283 - CmaCh15G002970.1 Cma15g00297 309447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00297 593 PANTHER RECEPTOR-LIKE PROTEIN 55 16 580 - -
Cma15g00297 593 SUPERFAMILY L domain-like 30 207 - -
Cma15g00297 593 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Cma15g00297 593 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Cma15g00297 593 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Cma15g00297 593 SUPERFAMILY Protein kinase-like (PK-like) 285 565 IPR011009 -
Cma15g00297 593 Gene3D Transferase(Phosphotransferase) domain 1 383 586 - -
Cma15g00297 593 ProSiteProfiles Protein kinase domain profile. 308 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00297 593 Gene3D Ribonuclease Inhibitor 33 223 IPR032675 -
Cma15g00297 593 Pfam Protein tyrosine and serine/threonine kinase 333 515 IPR001245 GO:0004672|GO:0006468
Cma15g00297 593 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 580 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00297 Cma-Chr15:1391433 Cma17g01324 Cma-Chr17:8922872 1.31E-172 dispersed
Cma15g00297 Cma-Chr15:1391433 Cma04g02741 Cma-Chr4:18437183 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69133 PF07714 PK_Tyr_Ser-Thr 3.40E-28 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00297 - - cmos:111445255 1097.03