Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00312 ATGGCCGGTGGCATCTTCAATCGTCTGTTTTACTATCTATTTTTTGTGTATTTGGCATCTTCTTTTGCTGGATTGCAGGTTTTTGTGCGGGGTCGGTTGCTTCTAAGTTCTAAACCCCACCCGGATGATGCTGCGGCCACTGCTCGTTGGTTGGTTTCTCAGAATTCATGGGGAATCTTGAGGAATGTGGTTTCGTTTAGTGATGGGCCACCGGGCAAAGGTCGAGGCACGCCATATTTCTACTTAACAACTCTTGACCCAACTGCAAGATATGCAATCTCAGATGAGAGGGCTTCATTTACGCTAAGTGAGTACCCTATTGGCACTTGTGGCAAGATAGATCCCGAAAACCCGACTTGCGCGAAGATTACGTTGATCGGGAAGCTGAGGCAGGTGGATCCTAATTCCAAAGAAGTAGAGTTTGCTAAAACTTCCTTGTTCTCAAAGCATGCAGAGATGAAGAAGTGGCCTAAGGATCACGACTTTCGGTTCTACAAATTAGTAATAGAGAACATATTCTTGATCGATTGGTTCGGTGGGCCGAAGCCACTTACAGTCGATCAATATCTACATTTCAAATTAAAAAACTATATACAAATCCAGAGATTCTTCTTCTTCCTCCGATTCTACAGATTTTTTCTCTTCCTCGTTTTTCGCGGCTTTGTCCTCATGATTCCACAAGCTTCCTCGTTCAATATCGCCGTTCCACTCTCCGGTTCCCCCCTCGGGCACTCCCGTCACCGACATGTCGTGCGAGCTCAAGCGGAACCGTCCGAGAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCATGTTAGAGAAGCTCATGTTAGATCTAAACAGGGACTAGCAGATCACAAAGATACATTGGGTGCACCACTTTGTCCTTGCCGGCATTATGATGACAAACCTGCTGAAGTTGCACAAGGTTTTTGGAACTGTCCATGTGTTCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCAGAGAACGACTTTGCGGGCACTGATCAGGTCGAGGCTTCAATTGTTTCACAGGTTTCGTTCCTGGAGATGTCGAGGCCCCAAGTCACCATCACTCTGGGGCGCTCTGGTCAGATGGTAAAGAGAGGAGGTTCTGACTTCGCTCAATCGAATATTGATTCTGGACCAGTGCCAAGAAGAAAACGATATATTGAGAGATCAGCAGATAATGCAGAGGATTTGTTCTCATCCACGAATAAGCGGATGAGAGTTAGATCCCCAGATGGGATCATGAAGAGCTCCATGGGACTTTCACCTCCTAGATACAATGATGAGTTTAGGAGGATCTCATCTATGAGGGAAGCTGATCGTTCTAGAGATGAATGGTTTTTTAGGAACAGCGTTGCTGATAGTTATAGGTCTGTAGACTCTGCACCTGCGAAAATGAAAGCCACCCTCCCTGTGTCTGGCAAGGCAGTTAAGGATCTCACAGCAATAAGTGGCAGCATGCAGAGAAGTTCCGCAATGGGAGAGGGTACTCTTTCTGTTGCTGGCTTGTTGAATTCGCTTGGTTTGGGGAAATATGTCATTCATTTTCAGGCAGAAGAAATTGATATGACAGCTTTGAGACAGATGGGAGACAGGGATCTTAAAGAGTTGGGGATACCCATGAGCATAGACCTCTCTGCCTTACCAAAGCTGTGCTTAGCATACATGGATAAAACTTTGAACCATTTACTAATTGAGAATGGAGTCGACGGATACCCAATTCATTCGGGAAGCAGAACAGGCTACGAAGATGATCATCACTACGCTCCTGATTCTATGCATGCTACTTTAGCATTTTGGAAGAAGGGAATTGTGTCTGTCTCACCATCAGACTGGCAAGTCAAAAAGGAGGAGATCAAGAAGATCAACGAGTTGATGCTTCTACTCTCATCTGGAGAAAGCAGAGGAGGAGATTTTCTTCTTCACTTGGGGATTTGCTTACCTTTACTCTTTCTCGATTCTGCTCATATTCTGAAACCACAAATTCTCTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGTTCATACCTCCGCGGACTTGGTCCACTGGACACCGGATTTTCACCAGCATTCTCAGCCGCTGTTCCGTTATCTGACTTCGTTTCACTGCACAAATCATGGAGCTTCAGGAACATTTCCTTGAGTCCTTTGATTGACGAGCATAGAAACTACCTTCTTTGTATTGTTATAAGGGGTTTCTTCCTTTTTCAGAGATTGAAATCTGAATCTCACAATCCAAAAATGGAATTTCAGGAGGGTTTGATGAAGTTCATGATCCATAGACACATCAAACACAACTGGGTTTTGGAGAAGAATTCTCCACCGGTTGCAGTTTCAGAGATAACCAGTAGTCCTAGACGGAAATGGCGGATCTTCAATCGGTCTTCTTCTTCCCCATTTCCTTCGAAACCTCCCCAATCGAAGGAAATACCTAAAGAATTGCTCTGTCCCATTTCTGGGTCTTTAATGGCGGATCCTGTAATTGTCTCCTCTGGTCACACTTTCGAAGCCGCCTGTGTTCAGGTTTGTAAAGATTTAGGGTTGAAGCCGACTCTGTTAGATGGTTCCAACCCGGATTTCTCCTCTGTTATCCCAAATCTGGCTCTCAAATCCACTATTCTCAATTGGTGCAAGAATTCCTCTTCTGAATCCCCCAAACCCCTCGATTTCTCCTCCGCTGAAAAGCTCGTTCGTCAATTCATGGCGGCCCACACCAAAAGCGATGAGGAATTGATTCAAGGGATTGCAGAGAATCCTGTGGTTCGATTCAACCACGCCGCCACCGAAGTCACTCGTCGGACCTCTCATTTCCACTCGAGCTCCGATGAATCTGTAGGTGCCGCCGTTCCAACTCTGCCCCTTCCTCTCGCGACAAGGCCGAGTTGTTGTTCTTCATCTTCTTCCTCTGACATCGAGGTAATCAGTGATCTGAACTTGCCCGAGGAAGAAGAGATTATCGCGAAGCTGAAAAGCTCTCAGGTTATTGAGATTGAAGAGGCTGTGACTGCGCTGAGAAAAATCACTAGAACTCGAGAGGATTCCAGGGTTCATCTTTGTTCTCCTCTGATTCTCTCTGCTCTGCGATCTCTCATCGTCTCGAGGTACACTGGCGTTCAGGTGAATTCAGTTGCAGCGCTTGTAAATCTGTCTTTAGAGAATTTGAACAAGGTCAAGATTGTAAGGTCGGGGATTCTCCCCAATTTGATCGATGTTCTGAAAGGGGGTTCACCGGAGGTTCAAGAACATGCCGCCGGCGCCATTTTCAGCTTAGCTCTCGAAGACGACAACAAGACCGCGATCGGCGTTTTGGGTGCTCTGCCGCCATTGATACGGCTATTGGTATCAGATTCAGAGCAGACTCGGCACGACTCGGCTCTTGCTCTTTATCACTTATCGCACGTTCAGAGCAACCGTTCGAAGCTTGTGAAACTTGGGTCGGTGCCGGTCTTTCTCGGGATGGTGAAATCCGGCCATATGGCCGGCCGTATTTTACTGATATTGTGTAATTTAGCTGCTTGTTTCGAGGGCCGGGCGGCGTTGTTGGACTCCGGTGCAGTGGAGTGCTTGGTGGGGATGATGAGGGAGAACGAGCTGGACACTGAGTCGACTCGGGAGAGTTGTGTGGCTGTCCTGTTCGGACTGAGTTACGGCGGTTTGAGGTTTAAGGGTCTGGCAAAAACCGCCGGAGCAATGGAGGTGTTCATGGCGGTAGAGAAAAATGGAAGCGAGAGATCAAAAGAAAAGGTGAAGAGAATCATGGAGTATATGAAAGCCAGAGATGAGGAAGCTGAGGATGTGAATTGGGAGGAACTGCTGGACTCGGGTTGTTTTGGCAGCCGGACTCGGTGTCGAATCGGTGCCGGAATGGACATATCCACCGCGAACTCGTCGGAGTTCTGA 3930 47.12 MAGGIFNRLFYYLFFVYLASSFAGLQVFVRGRLLLSSKPHPDDAAATARWLVSQNSWGILRNVVSFSDGPPGKGRGTPYFYLTTLDPTARYAISDERASFTLSEYPIGTCGKIDPENPTCAKITLIGKLRQVDPNSKEVEFAKTSLFSKHAEMKKWPKDHDFRFYKLVIENIFLIDWFGGPKPLTVDQYLHFKLKNYIQIQRFFFFLRFYRFFLFLVFRGFVLMIPQASSFNIAVPLSGSPLGHSRHRHVVRAQAEPSEKSVEIMRKFSEHVREAHVRSKQGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGTDQVEASIVSQVSFLEMSRPQVTITLGRSGQMVKRGGSDFAQSNIDSGPVPRRKRYIERSADNAEDLFSSTNKRMRVRSPDGIMKSSMGLSPPRYNDEFRRISSMREADRSRDEWFFRNSVADSYRSVDSAPAKMKATLPVSGKAVKDLTAISGSMQRSSAMGEGTLSVAGLLNSLGLGKYVIHFQAEEIDMTALRQMGDRDLKELGIPMSIDLSALPKLCLAYMDKTLNHLLIENGVDGYPIHSGSRTGYEDDHHYAPDSMHATLAFWKKGIVSVSPSDWQVKKEEIKKINELMLLLSSGESRGGDFLLHLGICLPLLFLDSAHILKPQILSLLSLSLSLSLSCSYLRGLGPLDTGFSPAFSAAVPLSDFVSLHKSWSFRNISLSPLIDEHRNYLLCIVIRGFFLFQRLKSESHNPKMEFQEGLMKFMIHRHIKHNWVLEKNSPPVAVSEITSSPRRKWRIFNRSSSSPFPSKPPQSKEIPKELLCPISGSLMADPVIVSSGHTFEAACVQVCKDLGLKPTLLDGSNPDFSSVIPNLALKSTILNWCKNSSSESPKPLDFSSAEKLVRQFMAAHTKSDEELIQGIAENPVVRFNHAATEVTRRTSHFHSSSDESVGAAVPTLPLPLATRPSCCSSSSSSDIEVISDLNLPEEEEIIAKLKSSQVIEIEEAVTALRKITRTREDSRVHLCSPLILSALRSLIVSRYTGVQVNSVAALVNLSLENLNKVKIVRSGILPNLIDVLKGGSPEVQEHAAGAIFSLALEDDNKTAIGVLGALPPLIRLLVSDSEQTRHDSALALYHLSHVQSNRSKLVKLGSVPVFLGMVKSGHMAGRILLILCNLAACFEGRAALLDSGAVECLVGMMRENELDTESTRESCVAVLFGLSYGGLRFKGLAKTAGAMEVFMAVEKNGSERSKEKVKRIMEYMKARDEEAEDVNWEELLDSGCFGSRTRCRIGAGMDISTANSSEF 1309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1439680 1454635 + CmaCh15G003120.1 Cma15g00312 309462

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00312 1309 Gene3D - 42 194 IPR012349 -
Cma15g00312 1309 Pfam Armadillo/beta-catenin-like repeat 1065 1101 IPR000225 GO:0005515
Cma15g00312 1309 Pfam Armadillo/beta-catenin-like repeat 1104 1142 IPR000225 GO:0005515
Cma15g00312 1309 CDD RING-Ubox 825 868 - -
Cma15g00312 1309 PANTHER U BOX DOMAIN-CONTAINING 796 1298 - -
Cma15g00312 1309 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 796 1298 - -
Cma15g00312 1309 SMART arm_5 1021 1061 IPR000225 GO:0005515
Cma15g00312 1309 SMART arm_5 1183 1226 IPR000225 GO:0005515
Cma15g00312 1309 SMART arm_5 1103 1143 IPR000225 GO:0005515
Cma15g00312 1309 SMART arm_5 1062 1102 IPR000225 GO:0005515
Cma15g00312 1309 Gene3D - 990 1265 IPR011989 -
Cma15g00312 1309 Gene3D - 506 552 IPR013761 -
Cma15g00312 1309 SUPERFAMILY Ferredoxin thioredoxin reductase (FTR), catalytic beta chain 260 342 IPR036644 GO:0016730
Cma15g00312 1309 SMART Ubox_2 823 886 IPR003613 GO:0004842|GO:0016567
Cma15g00312 1309 Pfam Ferredoxin thioredoxin reductase catalytic beta chain 280 342 IPR004209 GO:0016730
Cma15g00312 1309 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1114 1156 IPR000225 GO:0005515
Cma15g00312 1309 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1073 1110 IPR000225 GO:0005515
Cma15g00312 1309 Pfam Pyridoxamine 5'-phosphate oxidase 40 190 - -
Cma15g00312 1309 SUPERFAMILY ARM repeat 995 1253 IPR016024 -
Cma15g00312 1309 Pfam SAM domain (Sterile alpha motif) 507 547 IPR001660 GO:0005515
Cma15g00312 1309 ProSiteProfiles U-box domain profile. 819 893 IPR003613 GO:0004842|GO:0016567
Cma15g00312 1309 SUPERFAMILY FMN-binding split barrel 42 192 - -
Cma15g00312 1309 SUPERFAMILY RING/U-box 815 892 - -
Cma15g00312 1309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 819 892 IPR013083 -
Cma15g00312 1309 SUPERFAMILY SAM/Pointed domain 506 549 IPR013761 -
Cma15g00312 1309 Gene3D Ferredoxin thioredoxin reductase catalytic beta subunit 252 353 IPR036644 GO:0016730
Cma15g00312 1309 Pfam U-box domain 820 890 IPR003613 GO:0004842|GO:0016567
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00312 - - - cmax:111489531 1056.97
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma04g02726 Cma15g00312 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00909 Cma-Chr5:7207998 Cma15g00312 Cma-Chr15:1439680 2.11E-17 dispersed
Cma10g00149 Cma-Chr10:682222 Cma15g00312 Cma-Chr15:1439680 1.78E-160 dispersed
Cma15g00312 Cma-Chr15:1439680 Cma20g00982 Cma-Chr20:5237544 8.22E-09 dispersed
Cma17g01270 Cma-Chr17:8616596 Cma15g00312 Cma-Chr15:1439680 5.98E-12 dispersed
Cma04g02727 Cma-Chr4:18368692 Cma15g00312 Cma-Chr15:1439680 9.85E-59 transposed
Cma13g00905 Cma-Chr13:7247896 Cma15g00312 Cma-Chr15:1439680 4.24E-141 wgd
Cma15g00312 Cma-Chr15:1439680 Cma18g00146 Cma-Chr18:754216 2.41E-139 wgd
Cma15g00312 Cma-Chr15:1439680 Cma04g02726 Cma-Chr4:18365399 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1415 . Blo11g00678 . . . . Bma14g01592 . . . . . . . Sed03g0156 . Cpe13g00921 Bhi06g00478 Tan11g0585 Cmetu09g1014 . Hepe02g3127 . Lcy10g1953 . . . . . . . . . Cone2ag0153 Cone16ag0900 Lsi02g01538 Csa05g02927 . . . . . . . Bpe11g01559 . . . Cmo04g02856 Cmo15g00326 Cma04g02726 Cma15g00312 Car04g02629 Car15g00301 . Cpe01g02363 . . . . . . . Cla09g01823 Cam09g1920 Cec09g1985 Cco09g2079 . . Cre01g0585 . . Chy09g00312 Cme09g00333
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma14g00569 . 1 1040 U-box Gene Family AT5G15400 76.6 0.0e+00 1586.2
Cma11g01151 . 1 1042 U-box Gene Family AT5G15400 75.5 0.0e+00 1557.7
Cma02g00507 CCT,CST 1 814 U-box Gene Family AT5G67340 50.6 6.2e-120 429.1
Cma08g00287 . 20 776 U-box Gene Family AT3G54790 51.3 5.4e-130 462.6
Cma20g00982 CCT,CST 251 884 U-box Gene Family AT2G23140 64.0 1.9e-115 414.1
Cma02g00507 CCT,CST 197 814 U-box Gene Family AT2G23140 64.1 1.9e-112 404.1
Cma05g00083 . 1 770 U-box Gene Family AT1G24330 58.8 5.0e-240 828.2
Cma12g00066 . 1 797 U-box Gene Family AT1G24330 56.2 1.7e-235 813.1
Cma18g00710 CCT 1 760 U-box Gene Family AT1G24330 58.1 6.5e-232 801.2
Cma04g01823 CCT 1 761 U-box Gene Family AT1G24330 56.9 1.1e-226 783.9
Cma05g00083 . 1 769 U-box Gene Family AT1G67530 59.2 2.6e-236 815.8
Cma12g00066 . 1 713 U-box Gene Family AT1G67530 61.3 1.6e-233 806.6
Cma18g00710 CCT 1 760 U-box Gene Family AT1G67530 57.5 3.2e-226 782.3
Cma04g01823 CCT 1 761 U-box Gene Family AT1G67530 56.7 9.6e-223 770.8
Cma07g00289 . 1 362 U-box Gene Family AT4G21350 62.9 1.0e-121 434.1
Cma03g00505 . 1 362 U-box Gene Family AT4G21350 62.9 6.6e-121 431.4
Cma19g00177 . 164 488 U-box Gene Family AT3G07360 56.4 3.4e-81 299.3
Cma02g01665 . 182 503 U-box Gene Family AT3G07360 56.0 9.9e-81 297.7
Cma04g00054 . 271 466 U-box Gene Family AT1G71020 67.7 3.3e-72 270.0
Cma04g00997 CCT 242 443 U-box Gene Family AT1G71020 66.0 2.1e-71 267.3
Cma15g00946 CCT 674 877 U-box Gene Family AT1G71020 54.4 1.3e-52 204.9
Cma18g00906 CST 235 438 U-box Gene Family AT1G71020 53.6 1.3e-49 194.9
Cma13g00132 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 4.3e-48 189.9
Cma01g00596 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 9.6e-48 188.7
Cma20g00410 CCT 254 424 U-box Gene Family AT1G71020 57.1 3.1e-46 183.7
Cma04g01383 CST 241 390 U-box Gene Family AT1G71020 53.9 7.3e-40 162.5
Cma04g00997 CCT 6 643 U-box Gene Family AT1G23030 56.7 6.1e-108 389.0
Cma04g00054 . 18 670 U-box Gene Family AT1G23030 54.5 4.9e-105 379.4
Cma01g00596 CCT,CST 93 638 U-box Gene Family AT2G28830 59.1 1.4e-101 367.9
Cma20g00410 CCT 93 634 U-box Gene Family AT2G28830 50.1 2.1e-97 354.0
Cma13g00132 CCT,CST 92 428 U-box Gene Family AT2G28830 56.8 4.8e-94 342.8
Cma01g00596 CCT,CST 1 662 U-box Gene Family AT3G46510 68.7 1.8e-169 593.6
Cma13g00132 CCT,CST 1 634 U-box Gene Family AT3G46510 68.6 4.0e-161 565.8
Cma20g00410 CCT 11 637 U-box Gene Family AT3G46510 66.3 6.3e-159 558.5
Cma18g00906 CST 30 645 U-box Gene Family AT3G46510 58.4 1.9e-123 440.7
Cma04g01383 CST 6 615 U-box Gene Family AT3G46510 53.3 3.5e-109 393.3
Cma18g00906 CST 22 647 U-box Gene Family AT3G54850 67.3 8.1e-164 574.7
Cma04g01383 CST 8 617 U-box Gene Family AT3G54850 61.4 2.0e-141 500.4
Cma20g00410 CCT 13 627 U-box Gene Family AT3G54850 56.4 8.5e-113 405.2
Cma01g00596 CCT,CST 8 641 U-box Gene Family AT3G54850 54.6 1.8e-102 370.9
Cma20g00717 . 97 650 U-box Gene Family AT5G42340 65.9 7.3e-123 438.7
Cma07g01227 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cma03g00299 CST 9 669 U-box Gene Family AT5G01830 56.8 4.1e-198 688.7
Cma18g00432 CST 44 750 U-box Gene Family AT1G29340 68.1 9.8e-246 847.0
Cma13g00582 CST 1 710 U-box Gene Family AT1G29340 67.1 6.6e-242 834.3
Cma01g00369 . 61 476 U-box Gene Family AT5G37490 50.1 5.2e-109 392.1
Cma06g00527 CCT 2 407 U-box Gene Family AT3G52450 54.3 1.8e-125 446.8
Cma03g00257 . 4 422 U-box Gene Family AT3G52450 53.8 1.2e-121 434.1
Cma07g01176 . 3 403 U-box Gene Family AT3G52450 52.1 3.8e-112 402.5
Cma06g00527 CCT 2 406 U-box Gene Family AT2G35930 56.0 2.8e-125 446.0
Cma03g00257 . 4 422 U-box Gene Family AT2G35930 52.0 4.0e-119 425.6
Cma07g01176 . 3 403 U-box Gene Family AT2G35930 53.6 3.3e-113 406.0
Cma04g00485 . 7 420 U-box Gene Family AT3G19380 64.8 9.3e-148 520.8
Cma04g00485 . 1 420 U-box Gene Family AT1G49780 65.3 5.6e-153 538.1
Cma03g01083 CST 1 411 U-box Gene Family AT5G64660 52.8 4.1e-119 425.6
Cma07g00789 CST 1 411 U-box Gene Family AT5G64660 53.3 3.4e-118 422.5
Cma07g00789 CST 1 411 U-box Gene Family AT5G09800 51.8 7.2e-105 378.3
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT3G49810 65.6 2.0e-164 576.2
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT3G49810 62.9 2.3e-152 536.2
Cma12g00605 CCT,CST 23 450 U-box Gene Family AT3G49810 62.6 9.9e-148 520.8
Cma05g00129 CCT,CST 1 452 U-box Gene Family AT3G49810 61.3 1.9e-146 516.5
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT5G65920 64.6 3.8e-160 562.0
Cma05g00129 CCT,CST 23 452 U-box Gene Family AT5G65920 65.3 6.8e-149 524.6
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT5G65920 61.7 5.8e-148 521.5
Cma12g00605 CCT,CST 1 450 U-box Gene Family AT5G65920 60.5 2.5e-143 506.1
Cma06g01069 CST 54 928 U-box Gene Family AT2G45910 50.2 1.7e-225 780.0
Cma14g02042 CST 1 868 U-box Gene Family AT2G45910 50.5 4.9e-217 751.9
Cma08g00785 . 372 644 U-box Gene Family AT2G45910 51.6 1.5e-77 288.5
Cma05g01403 CST 4 718 U-box Gene Family AT2G19410 50.6 3.6e-209 725.7
Cma15g01353 . 23 805 U-box Gene Family AT4G25160 53.8 3.9e-222 768.8
Cma02g00976 . 50 835 U-box Gene Family AT4G25160 51.4 7.1e-216 748.0
Cma15g00312 CST 815 1309 U-box Gene Family AT5G40140 57.2 2.4e-95 347.1
Cma04g02726 CST 57 545 U-box Gene Family AT5G40140 55.7 2.4e-87 320.5
Cma13g00905 . 29 490 U-box Gene Family AT5G40140 53.7 3.4e-57 220.3
Cma05g00970 . 4 861 U-box Gene Family AT1G76390 56.4 6.2e-257 884.4
Cma05g00970 . 13 859 U-box Gene Family AT1G20780 58.0 1.4e-269 926.4
Cma05g00083 . 1 771 U-box Gene Family AT1G27910 62.0 1.3e-264 909.8
Cma18g00710 CCT 1 769 U-box Gene Family AT1G27910 62.6 7.1e-263 904.0
Cma04g01823 CCT 1 770 U-box Gene Family AT1G27910 61.5 4.5e-257 884.8
Cma12g00066 . 1 805 U-box Gene Family AT1G27910 59.6 1.7e-256 882.9
Cma07g00649 CST 546 1137 U-box Gene Family AT5G67530 74.8 1.1e-263 906.4
Cma03g00917 . 1 594 U-box Gene Family AT5G67530 74.9 4.4e-260 894.4
Cma14g01990 . 3 157 U-box Gene Family AT5G67530 52.9 5.5e-45 179.9
Cma07g00578 . 71 859 U-box Gene Family AT5G65500 50.8 1.6e-209 726.9
Cma14g01841 CST 1 518 U-box Gene Family AT1G04510 74.7 1.5e-224 776.2
Cma06g01297 CST 1 521 U-box Gene Family AT1G04510 67.8 5.1e-204 708.0
Cma14g01841 CST 1 485 U-box Gene Family AT2G33340 73.3 7.1e-208 720.7
Cma06g01297 CST 1 490 U-box Gene Family AT2G33340 66.6 6.6e-190 661.0
Cma02g01666 . 11 279 U-box Gene Family AT3G07370 65.4 1.1e-99 360.5
Cma19g00176 . 10 278 U-box Gene Family AT3G07370 65.1 4.0e-99 358.6
Cma14g00569 . 1 1040 U-box Gene Family AT5G15400 76.6 0.0e+00 1586.2
Cma11g01151 . 1 1042 U-box Gene Family AT5G15400 75.5 0.0e+00 1557.7
Cma02g00507 CCT,CST 1 814 U-box Gene Family AT5G67340 50.6 6.2e-120 429.1
Cma08g00287 . 20 776 U-box Gene Family AT3G54790 51.3 5.4e-130 462.6
Cma20g00982 CCT,CST 251 884 U-box Gene Family AT2G23140 64.0 1.9e-115 414.1
Cma02g00507 CCT,CST 197 814 U-box Gene Family AT2G23140 64.1 1.9e-112 404.1
Cma05g00083 . 1 770 U-box Gene Family AT1G24330 58.8 5.0e-240 828.2
Cma12g00066 . 1 797 U-box Gene Family AT1G24330 56.2 1.7e-235 813.1
Cma18g00710 CCT 1 760 U-box Gene Family AT1G24330 58.1 6.5e-232 801.2
Cma04g01823 CCT 1 761 U-box Gene Family AT1G24330 56.9 1.1e-226 783.9
Cma05g00083 . 1 769 U-box Gene Family AT1G67530 59.2 2.6e-236 815.8
Cma12g00066 . 1 713 U-box Gene Family AT1G67530 61.3 1.6e-233 806.6
Cma18g00710 CCT 1 760 U-box Gene Family AT1G67530 57.5 3.2e-226 782.3
Cma04g01823 CCT 1 761 U-box Gene Family AT1G67530 56.7 9.6e-223 770.8
Cma07g00289 . 1 362 U-box Gene Family AT4G21350 62.9 1.0e-121 434.1
Cma03g00505 . 1 362 U-box Gene Family AT4G21350 62.9 6.6e-121 431.4
Cma19g00177 . 164 488 U-box Gene Family AT3G07360 56.4 3.4e-81 299.3
Cma02g01665 . 182 503 U-box Gene Family AT3G07360 56.0 9.9e-81 297.7
Cma04g00054 . 271 466 U-box Gene Family AT1G71020 67.7 3.3e-72 270.0
Cma04g00997 CCT 242 443 U-box Gene Family AT1G71020 66.0 2.1e-71 267.3
Cma15g00946 CCT 674 877 U-box Gene Family AT1G71020 54.4 1.3e-52 204.9
Cma18g00906 CST 235 438 U-box Gene Family AT1G71020 53.6 1.3e-49 194.9
Cma13g00132 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 4.3e-48 189.9
Cma01g00596 CCT,CST 258 427 U-box Gene Family AT1G71020 58.4 9.6e-48 188.7
Cma20g00410 CCT 254 424 U-box Gene Family AT1G71020 57.1 3.1e-46 183.7
Cma04g01383 CST 241 390 U-box Gene Family AT1G71020 53.9 7.3e-40 162.5
Cma04g00997 CCT 6 643 U-box Gene Family AT1G23030 56.7 6.1e-108 389.0
Cma04g00054 . 18 670 U-box Gene Family AT1G23030 54.5 4.9e-105 379.4
Cma01g00596 CCT,CST 93 638 U-box Gene Family AT2G28830 59.1 1.4e-101 367.9
Cma20g00410 CCT 93 634 U-box Gene Family AT2G28830 50.1 2.1e-97 354.0
Cma13g00132 CCT,CST 92 428 U-box Gene Family AT2G28830 56.8 4.8e-94 342.8
Cma01g00596 CCT,CST 1 662 U-box Gene Family AT3G46510 68.7 1.8e-169 593.6
Cma13g00132 CCT,CST 1 634 U-box Gene Family AT3G46510 68.6 4.0e-161 565.8
Cma20g00410 CCT 11 637 U-box Gene Family AT3G46510 66.3 6.3e-159 558.5
Cma18g00906 CST 30 645 U-box Gene Family AT3G46510 58.4 1.9e-123 440.7
Cma04g01383 CST 6 615 U-box Gene Family AT3G46510 53.3 3.5e-109 393.3
Cma18g00906 CST 22 647 U-box Gene Family AT3G54850 67.3 8.1e-164 574.7
Cma04g01383 CST 8 617 U-box Gene Family AT3G54850 61.4 2.0e-141 500.4
Cma20g00410 CCT 13 627 U-box Gene Family AT3G54850 56.4 8.5e-113 405.2
Cma01g00596 CCT,CST 8 641 U-box Gene Family AT3G54850 54.6 1.8e-102 370.9
Cma20g00717 . 97 650 U-box Gene Family AT5G42340 65.9 7.3e-123 438.7
Cma07g01227 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cma03g00299 CST 9 669 U-box Gene Family AT5G01830 56.8 4.1e-198 688.7
Cma18g00432 CST 44 750 U-box Gene Family AT1G29340 68.1 9.8e-246 847.0
Cma13g00582 CST 1 710 U-box Gene Family AT1G29340 67.1 6.6e-242 834.3
Cma01g00369 . 61 476 U-box Gene Family AT5G37490 50.1 5.2e-109 392.1
Cma06g00527 CCT 2 407 U-box Gene Family AT3G52450 54.3 1.8e-125 446.8
Cma03g00257 . 4 422 U-box Gene Family AT3G52450 53.8 1.2e-121 434.1
Cma07g01176 . 3 403 U-box Gene Family AT3G52450 52.1 3.8e-112 402.5
Cma06g00527 CCT 2 406 U-box Gene Family AT2G35930 56.0 2.8e-125 446.0
Cma03g00257 . 4 422 U-box Gene Family AT2G35930 52.0 4.0e-119 425.6
Cma07g01176 . 3 403 U-box Gene Family AT2G35930 53.6 3.3e-113 406.0
Cma04g00485 . 7 420 U-box Gene Family AT3G19380 64.8 9.3e-148 520.8
Cma04g00485 . 1 420 U-box Gene Family AT1G49780 65.3 5.6e-153 538.1
Cma03g01083 CST 1 411 U-box Gene Family AT5G64660 52.8 4.1e-119 425.6
Cma07g00789 CST 1 411 U-box Gene Family AT5G64660 53.3 3.4e-118 422.5
Cma07g00789 CST 1 411 U-box Gene Family AT5G09800 51.8 7.2e-105 378.3
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT3G49810 65.6 2.0e-164 576.2
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT3G49810 62.9 2.3e-152 536.2
Cma12g00605 CCT,CST 23 450 U-box Gene Family AT3G49810 62.6 9.9e-148 520.8
Cma05g00129 CCT,CST 1 452 U-box Gene Family AT3G49810 61.3 1.9e-146 516.5
Cma01g01775 CCT,CST 1 455 U-box Gene Family AT5G65920 64.6 3.8e-160 562.0
Cma05g00129 CCT,CST 23 452 U-box Gene Family AT5G65920 65.3 6.8e-149 524.6
Cma09g00301 CCT,CST 1 441 U-box Gene Family AT5G65920 61.7 5.8e-148 521.5
Cma12g00605 CCT,CST 1 450 U-box Gene Family AT5G65920 60.5 2.5e-143 506.1
Cma06g01069 CST 54 928 U-box Gene Family AT2G45910 50.2 1.7e-225 780.0
Cma14g02042 CST 1 868 U-box Gene Family AT2G45910 50.5 4.9e-217 751.9
Cma08g00785 . 372 644 U-box Gene Family AT2G45910 51.6 1.5e-77 288.5
Cma05g01403 CST 4 718 U-box Gene Family AT2G19410 50.6 3.6e-209 725.7
Cma15g01353 . 23 805 U-box Gene Family AT4G25160 53.8 3.9e-222 768.8
Cma02g00976 . 50 835 U-box Gene Family AT4G25160 51.4 7.1e-216 748.0
Cma15g00312 CST 815 1309 U-box Gene Family AT5G40140 57.2 2.4e-95 347.1
Cma04g02726 CST 57 545 U-box Gene Family AT5G40140 55.7 2.4e-87 320.5
Cma13g00905 . 29 490 U-box Gene Family AT5G40140 53.7 3.4e-57 220.3
Cma05g00970 . 4 861 U-box Gene Family AT1G76390 56.4 6.2e-257 884.4
Cma05g00970 . 13 859 U-box Gene Family AT1G20780 58.0 1.4e-269 926.4
Cma05g00083 . 1 771 U-box Gene Family AT1G27910 62.0 1.3e-264 909.8
Cma18g00710 CCT 1 769 U-box Gene Family AT1G27910 62.6 7.1e-263 904.0
Cma04g01823 CCT 1 770 U-box Gene Family AT1G27910 61.5 4.5e-257 884.8
Cma12g00066 . 1 805 U-box Gene Family AT1G27910 59.6 1.7e-256 882.9
Cma07g00649 CST 546 1137 U-box Gene Family AT5G67530 74.8 1.1e-263 906.4
Cma03g00917 . 1 594 U-box Gene Family AT5G67530 74.9 4.4e-260 894.4
Cma14g01990 . 3 157 U-box Gene Family AT5G67530 52.9 5.5e-45 179.9
Cma07g00578 . 71 859 U-box Gene Family AT5G65500 50.8 1.6e-209 726.9
Cma14g01841 CST 1 518 U-box Gene Family AT1G04510 74.7 1.5e-224 776.2
Cma06g01297 CST 1 521 U-box Gene Family AT1G04510 67.8 5.1e-204 708.0
Cma14g01841 CST 1 485 U-box Gene Family AT2G33340 73.3 7.1e-208 720.7
Cma06g01297 CST 1 490 U-box Gene Family AT2G33340 66.6 6.6e-190 661.0
Cma02g01666 . 11 279 U-box Gene Family AT3G07370 65.4 1.1e-99 360.5
Cma19g00176 . 10 278 U-box Gene Family AT3G07370 65.1 4.0e-99 358.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001407 2 2 3 4 1 2 4 2 2 2 2 2 4 2 2 4 2 6 4 2 2 2 2 2 1 2 2 3 2 1 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma15g00312 Cma_Chr15 FPKM 11.817241 13.184067 14.451268 14.926014 18.883575 16.801409 17.316555 18.776775 18.203688 18.124348