Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00316 ATGGCTGATAATGAAGAGGAGATGCGATCTTTGGCCTTGACGCCCACTTGGTCTGTTGCTTCTGTGCTAACCATTTTCGTTGTAGTCTCCTTGCTCGTGGAGAGGTCCATTCACCGGCTAAGCACTTGGTTGAGGAAGACTAACCGAAAGCCATTGTTAGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTTCTTGGATTTATTTCTCTCCTTTTAACAGCTACATCAAGCTTAATATCAAATATCTGCATCCCATCAAGGTTCTATAATACCCCTTTTACTCCATGTACCAAAGCCGAGATTGATGAACAAAAAGAAGACAGTTCATCTAAAGAACGGAAACTATACACCGTTTCGGTATTACCCCATTTGTTTAGGCGGATGCTTGATGGGAATGAGAAAACCTGCAAAGAGGGTTATGAGCCGTTCGTTTCGTACGAGGGTCTCGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCATATATCTTATAGCTGCTTAACAATGTTACTGGCAATCGTAAAGATTCACAGATGGAGAGCTTGGGAAGATGAAGCCCATATGGACAGACATGATTCACTAAAGGATATCACGAGAGAAATGACACTGCGGAGGCAATCGACCTTTGTTCGATATCACACTTCACATCCTATTACACGGAACAGCTTTCTAATCTGGGTGACATGTTTCTTCCGACAATTCGGGAATTCTGTAGTTCATGCTGACTACCTCACACTTCGCAAGGGCTTCATCATGAATCATCACCTCCCTTTGACGTATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTAGGTGTGAGCGCTCCGTTGTGGGGATTCGTCGTTGCTTTCATGCTGTTTGATGTAAAAGGATCTAATCTGTACTTCTGGATAGCATCCATTCCAATTGCTCTTGTTCTTCTCGTGGGCACGAAGCTGCAGCATGTCATTGCAACGTTGGCATTGGAAAGTGCTGGTATAACCAGTTCTTTTTCGGGTCCGAAGCTAAAGCCAAGAGATGATCTTTTCTGGTTTAAGAAGCCTGAACTTCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAATGCGTTTGAGTTGGCGTCGTTCTTCTGGTTTTGGTGGCAATTTGGATACAATTCTTGCTTTATTAGGAACCATATGCTTGTTTATGCAAGACTCATCTTGGGATTCGCCGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTGTATGCTCTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATCCATGGATGGGGCAAGGCAGCAAGAAGGAAAAGAAGGCTTGGCATGTTCACCGATGACACCACGATTCATACCGAAACAAGCACGGTTATGTCAATTGAGGATGATGACCGTCGGCTTATCGATGATACTTACGAAACTACTACTGGCTATACGACAATCGAGTTACAGCCAATTTCCGTACAAGAACAATCCGACCCTGTTGTTAATGAATGGCCAAGCAGAGCTAGAACGTCGCTTCTGCAATCCTCTGCGTCTCTTTCTTCACCGGTTGATCCGAAGTTGGAGGTTGAAAACTTTATGAGAAGCTTTTCTATGCCAGTTAAAAGATAG 1662 43.5 MADNEEEMRSLALTPTWSVASVLTIFVVVSLLVERSIHRLSTWLRKTNRKPLLEAVEKMKEELMLLGFISLLLTATSSLISNICIPSRFYNTPFTPCTKAEIDEQKEDSSSKERKLYTVSVLPHLFRRMLDGNEKTCKEGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRAWEDEAHMDRHDSLKDITREMTLRRQSTFVRYHTSHPITRNSFLIWVTCFFRQFGNSVVHADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSAPLWGFVVAFMLFDVKGSNLYFWIASIPIALVLLVGTKLQHVIATLALESAGITSSFSGPKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLGMFTDDTTIHTETSTVMSIEDDDRRLIDDTYETTTGYTTIELQPISVQEQSDPVVNEWPSRARTSLLQSSASLSSPVDPKLEVENFMRSFSMPVKR 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1463951 1468563 + CmaCh15G003160.1 Cma15g00316 309466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00316 553 PANTHER MLO-LIKE PROTEIN 11 5 522 - -
Cma15g00316 553 Pfam Mlo family 9 465 IPR004326 GO:0006952|GO:0016021
Cma15g00316 553 PANTHER MLO-LIKE PROTEIN 1 5 522 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00535 Cma-Chr4:2720460 Cma15g00316 Cma-Chr15:1463951 1.84E-160 dispersed
Cma09g00875 Cma-Chr9:4293452 Cma15g00316 Cma-Chr15:1463951 0 dispersed
Cma15g00316 Cma-Chr15:1463951 Cma16g01241 Cma-Chr16:9376688 4.54E-122 dispersed
Cma15g00316 Cma-Chr15:1463951 Cma01g01204 Cma-Chr1:8723068 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00316 K08472 - csv:101217434 977.622