Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma15g00399 | ATGTCGGGAAAAGGAGAGGGTCCGGCTATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAACATGATCGTGTTGAGATTATTGCCAATGACCAGGGGAATCGGACGACGCCGTCGTATGTTGCATTCACTGACACCGAGCGGCTCATCGGCGACGCTGCCAAGAACCAGGTCGCTATGAATCCTCTCAACACCGTCTTCGATGCGAAACGGTTGATTGGAAGGAGATTCTCTGACCCCTCGGTCCAGAGCGATGTGAAACTATGGCCATTCAAGCTCATCGCTGGTCCAGGTGACAAACCGATGATTGTCGTCAATTACAAAGGCGAAGAGAAGCAGTTCGCCGCTGAGGAAATCTCATCCATGGTCCTCACGAAAATGCGTGAGATAGCAGAAGCTTACCTCGGTTCCTCCGTAAAGAACGCCGTAGTCACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCTGGAGTCATTGCCGGCCTAAATGTCATGCGGATCATCAACGAGCCTACTGCAGCAGCTATTGCTTATGGACTCGACAAAAAGGCCACCAGTGTCGGCGAGAAGAATGTACTGATATTTGATTTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATTGAGGAAGGGATTTTTGAGGTGAAGGCGACTGCTGGTGACACCCATCTCGGAGGTGAAGACTTCGACAACAGATTGGTTAACCATTTCGTACAGGAATTCAAGAGGAAGCATAAGAAGGACATCAGTGGAAATCCGAGGGCTCTCAGAAGATTGAGGACTGCTTGTGAGAGGGCCAAGAGGACCCTTTCATCGACTGCCCAAACGACAATCGAGATTGATTCTTTGTATGAGGGAATTGATTTCTATACATCCATCACTCGTGCTAGATTCGAAGAGCTCAACATGGACCTGTTCCGGAAGTGTATGGAGCCAGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGTTCTACGAGGATTCCTAAGGTGCAGCAGCTGTTGCAGGATTTCTTCAATGGCAAGGAACTCTGCAAGAGTATCAACCCTGACGAGGCAGTTGCTTATGGAGCTGCTGTTCAAGCTGCTATCTTGAGTGGCGAAGGAAACGAAAAAGTGCAGGATCTTCTTCTTTTGGATGTCACTCCTCTGTCCCTAGGTTTGGAGACTGCAGGAGGTGTCATGACAGTTCTAATCCCAAGGAACACCACTATACCTGCCAAGAAGGAGCAAGTGTTCTCTACTTACTCAGACAACCAACCCGGTGTTCTTATTCAGGTCTACGAGGGCGAGAGGACAAGAACCAAAGACAACAACTTGTTGGGCAAGTTTGAACTCTCTGGCATCCCTCCTGCTCCAAGAGGTGTTCCTCAGATCACCGTTTGCTTCGACATCGACGCCAATGGCATCCTAAATGTTTCTGCCGAGGACAAAACCACCGGACAGAAGAATAAGATCACAATTACCAACGACAAAGGAAGGTTGTCCAAAGAAGAGATTGAGAAACTGGTTCAGGAAGCAGAGAAATTCAAGGCCGAGGATGAGGATCACAAGAAGAAAGTGGAATCGAAGAACGCATTGGAGAACTATGCATACAACATGAGGAACACGATCAGAGATGAAAAGATCGGTGGTAAACTTGCACCAGAAGATAAGAAGAAGATCGAGGATGCAGTTCAAGAGGCCATTCAATGGCTAGACAGCAACCAGCTGGCTGAGTCGGATGAATTTGATGACAAGATGAAGGAACTTGAGTCCATTTGCAACCCCATTATAGCCAAGATGTATCAAGGTGGTGCTGACATGGGCGGCGCCGGCGCCGGCATGGATGACGATGCCCCTTCTGGCGGAAGCGGCGCTGGTCCTAAGATTGAAGAAGTTGATTAG | 1950 | 48.82 | MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDVKLWPFKLIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTSITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPAKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEDHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPEDKKKIEDAVQEAIQWLDSNQLAESDEFDDKMKELESICNPIIAKMYQGGADMGGAGAGMDDDAPSGGSGAGPKIEEVD | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1783716 | 1787380 | + | CmaCh15G003990.1 | Cma15g00399 | 309549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma15g00399 | 649 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 544 | IPR029047 | - | |
Cma15g00399 | 649 | MobiDBLite | consensus disorder prediction | 620 | 649 | - | - | |
Cma15g00399 | 649 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Cma15g00399 | 649 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Cma15g00399 | 649 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Cma15g00399 | 649 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Cma15g00399 | 649 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Cma15g00399 | 649 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524|GO:0140662 | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Cma15g00399 | 649 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Cma15g00399 | 649 | Gene3D | - | 545 | 619 | IPR029048 | - | |
Cma15g00399 | 649 | Gene3D | - | 71 | 126 | - | - | |
Cma15g00399 | 649 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
Cma15g00399 | 649 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 628 | IPR013126 | GO:0005524|GO:0140662 | |
Cma15g00399 | 649 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Cma15g00399 | 649 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 623 | IPR029048 | - | |
Cma15g00399 | 649 | Coils | Coil | 514 | 541 | - | - | |
Cma15g00399 | 649 | Gene3D | - | 192 | 366 | - | - | |
Cma15g00399 | 649 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Cma15g00399 | 649 | Gene3D | - | 10 | 384 | - | - | |
Cma15g00399 | 649 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE | 1 | 628 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g02632 | Cma15g00399 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g01701 | Cma-Chr14:12612912 | Cma15g00399 | Cma-Chr15:1783716 | 8.19E-89 | dispersed | |
Cma15g00399 | Cma-Chr15:1783716 | Cma15g01284 | Cma-Chr15:8141692 | 0 | dispersed | |
Cma17g00811 | Cma-Chr17:6379178 | Cma15g00399 | Cma-Chr15:1783716 | 2.88E-89 | dispersed | |
Cma15g00399 | Cma-Chr15:1783716 | Cma15g00400 | Cma-Chr15:1791578 | 0 | tandem | |
Cma10g00456 | Cma-Chr10:2075136 | Cma15g00399 | Cma-Chr15:1783716 | 0 | transposed | |
Cma15g00399 | Cma-Chr15:1783716 | Cma03g00432 | Cma-Chr3:4566150 | 0 | wgd | |
Cma15g00399 | Cma-Chr15:1783716 | Cma04g02638 | Cma-Chr4:17988931 | 0 | wgd | |
Cma15g00399 | Cma-Chr15:1783716 | Cma07g00975 | Cma-Chr7:4720388 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma15g00399 | K03283 | - | csv:101211905 | 1212.21 |