Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00426 ATGAAGAAGTTGTTCTTTTTCAGAACTTCAGCACCTAGCCACGGCAGTACTGAAGTTTCTCAATTAAAAACAGAAAAACAAGATTTCACAGATCATCCATTTGAAGGTGGGTTGGACAATGTTGCAGGTACTGGTCTTAGAAGAAGTCGCTCGCTGTCTTCAGCATCATTGCTTGATGGTGGGAAGCATAAAAGTTCTTCTGGTTCAAAGAATAAAAATAGATCTCTGTATGGTAACTTCATTGGTTCTTCAGATCAGCAATGTGAACATTCAAACCGCTGTCAAACCCCACCATTAAGAAGACAGTGTAGGGCAAAGAAATTGGAGATGCTATATAATGATTATGGAGGTGTACCAGGGAGGTCTTGTTCTGCATCTGCTGCTTCATGCCGAAGTTATTGTGATTCTTCAGGAAATTCTTCCACTTCCTCTAGTAATGTCTCAAGTAAAATCTTGGACCGATATATTGATGATGGTGAGCAACAGGCAGAATCAAGCAAGCCCCAAAAGAGTATTCCTTCAAGAAATCACCCTAGAAATGGTAGTAGGAGGCGCCCCCCACAAGGTCGATGTACGGCACCCACTTCGCCAAAATATGTTATTGATGAGAAGACAAGTCTGCCATTTGAAGAATTTCCAAGATCGAATTATCATTTATTTCCTTCAAAGTATGCCGAAAATGGATTGGGGAATGAATCTCCAAGAACCATAGCGAAGAATGTAATTGAGAGACTCTCCCAATCTCATGGGATTCCTACAACAAATCCAATCACCGTCGGAGATATACATGATAGATCCTCTAATGAACGTTATGGTTCTAATGCAAATGTGATTCCCCAGAAAGTGTATTCAGTAAATGAACCGTTCGAAGCCATTAATAGAAATAATGTGGAGAGCTCTGGTGTAGATAGACAAAACTTAAGAAATCATAGTGAAGTGTTAAACCTTGTTGAAACTGAAGAGGATATGGATGTGGAACTCAAGAGGAGAATCAAGGTGGCAAAGGAGAGAGTCATGCTTTTCGGAGAAGAACGCGACCAGGAAAGCTATCTTCAACAGAGAACAGGAGTTTCAGGTTTGATTCAGACAATCAGACACATTAATGAGGAGAAAATGAGCTTAGCACTTGAGATTTTAAGTCTTCTACAGTCCCAAATTACTGAAAGGGCTTCTGCAAAAGAAGAGCTGAGACTGGCAAAGGAAATATTGGATTCTCAAACTAAGAAACTGGACAGAGAAAAGATTGAATTGCAATCAGAACTGGAGAAAGAGCTTGACAGAAGGTCCAGCGACTGGTCATTAAAGCTAGAAAAGTACCAATTGGAAGAACAAAGGCTACGTCAAAGAGTTCGGGAGCTAGCCGAGCAGAATGTATCTCTACAAAGGGAAGTTTCTCTTATTCATGAGAGGGACACAGAGAATAAATGCATAATATCAAATTCAGAGCAGAAGGCTAAGGACCTGACTGTAATAATAGATAAATTACGGGACGAAAACCAAGTTTTGACTCAGAATCTCTCCGACTTGCAGGATAAGTACAAAACTGCTGAAGAAGATAGAGAATCCTTTAAGAGGAATTTTGAGGAAAAGGATAAGGAATGCAAGGAGTTGTATAAAACGACAACGAGGCTAACGAGGACCTGCTGTGACCAGCAGAAAACAATCAGTGGATTGCAGGAACGGTTTACTTGCGAATTAGGGAAGAACACAGAAATCGAAAGGTTCGACAAGCATGTGGCGAAATTGCAGATGGAACAGATAAGGTTAACTGAAGTGGAATTGGGATTGAGAAGGGAATTAGAATCTTGCAGTTTCGAAATCGATTCCCTTCGGCACGAGAATATAAACATATTCAACCGCTTAAAGCACAATGGGAAAGACAATGGTGCTTTAACCATCAAGCTTGATGAGGAAATGGTAGCACGTGTCGATTATCTACAACATCAAGGGCTAACATTGTTGAATGAAGGCTTCCAGCTATGTGCAGAATTCTTTGAGTTCATGAAAGAGAGAATGCAGGGAATGGAAGTGGTGAAGAACAATTTGGATGGGCTATATTTGATTGAATCTGAGATGAAAGTTCAAGGATTAAAGCGTGGAACCGAAAGCTTAAAACGAAGTTTAAAGATAGCATCTTCATTATTGTATAAGAAATCCAATCAGTGTGTAAATGCAGATGAGTGGATGCAATTAGATTGTGATGCTTCAGAGCATGTTGTAAAATATGAGCTTAGAACAGAAAGGTTACTAACGAGTCTGTTGAGAGAGAAGCTTTACTCAAAGGAGCTAGAAATTGAGCAGCTGCAAGCTGAAATTGCAACGGCAGCTAGAGCCAACCACATTCTTAGATGCGAGGTGCAAAGTGCACAAGACAGCATATCCTGCATTACACACAAGCTAAAGGATCAAGAACTCCAGATTTTGAAAAGGAATGAGAATATGAACCGGTTACAAAATGACCTTGAAGAATCGACTACAGAATTGGCAATCATTAGGGGAACTGTGCCAAAGATTTCAGAGGAAAGAGATATTATGTGGGACAAAGTGAAACAATACAGTGAAGAGAATATGTTACTAAACTCGGAGGTGAATCTATTGAAGAAGAAGATTGAAACACTTGAAGAAGACATTCTTCTCAGGGAAGGTCAGATTACAATCCTCAAAGACTCCTTGAGAAACAAATCTTTTGACCTTCTTGGTAATATTGAATCCACAGACGAATTTCTCATACGATGA 2736 39.88 MKKLFFFRTSAPSHGSTEVSQLKTEKQDFTDHPFEGGLDNVAGTGLRRSRSLSSASLLDGGKHKSSSGSKNKNRSLYGNFIGSSDQQCEHSNRCQTPPLRRQCRAKKLEMLYNDYGGVPGRSCSASAASCRSYCDSSGNSSTSSSNVSSKILDRYIDDGEQQAESSKPQKSIPSRNHPRNGSRRRPPQGRCTAPTSPKYVIDEKTSLPFEEFPRSNYHLFPSKYAENGLGNESPRTIAKNVIERLSQSHGIPTTNPITVGDIHDRSSNERYGSNANVIPQKVYSVNEPFEAINRNNVESSGVDRQNLRNHSEVLNLVETEEDMDVELKRRIKVAKERVMLFGEERDQESYLQQRTGVSGLIQTIRHINEEKMSLALEILSLLQSQITERASAKEELRLAKEILDSQTKKLDREKIELQSELEKELDRRSSDWSLKLEKYQLEEQRLRQRVRELAEQNVSLQREVSLIHERDTENKCIISNSEQKAKDLTVIIDKLRDENQVLTQNLSDLQDKYKTAEEDRESFKRNFEEKDKECKELYKTTTRLTRTCCDQQKTISGLQERFTCELGKNTEIERFDKHVAKLQMEQIRLTEVELGLRRELESCSFEIDSLRHENINIFNRLKHNGKDNGALTIKLDEEMVARVDYLQHQGLTLLNEGFQLCAEFFEFMKERMQGMEVVKNNLDGLYLIESEMKVQGLKRGTESLKRSLKIASSLLYKKSNQCVNADEWMQLDCDASEHVVKYELRTERLLTSLLREKLYSKELEIEQLQAEIATAARANHILRCEVQSAQDSISCITHKLKDQELQILKRNENMNRLQNDLEESTTELAIIRGTVPKISEERDIMWDKVKQYSEENMLLNSEVNLLKKKIETLEEDILLREGQITILKDSLRNKSFDLLGNIESTDEFLIR 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1897938 1901364 + CmaCh15G004260.1 Cma15g00426 309576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00426 911 MobiDBLite consensus disorder prediction 159 200 - -
Cma15g00426 911 Coils Coil 849 876 - -
Cma15g00426 911 PANTHER CAP-GLY DOMAIN LINKER 1 900 - -
Cma15g00426 911 Coils Coil 436 463 - -
Cma15g00426 911 Coils Coil 758 785 - -
Cma15g00426 911 Coils Coil 389 427 - -
Cma15g00426 911 PANTHER CAP-GLY DOMAIN LINKER 1 900 - -
Cma15g00426 911 MobiDBLite consensus disorder prediction 7 76 - -
Cma15g00426 911 Coils Coil 800 834 - -
Cma15g00426 911 Coils Coil 478 533 - -
Cma15g00426 911 MobiDBLite consensus disorder prediction 46 76 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g00253 Cma15g00426 CCT
Cma04g02608 Cma15g00426 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00426 Cma-Chr15:1897938 Cma04g00253 Cma-Chr4:1233583 0 wgd
Cma15g00426 Cma-Chr15:1897938 Cma04g02608 Cma-Chr4:17821985 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00426 - - bhj:120080520 1422.53