Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00450 ATGGCTTCCAACACCTTGATGAGCTGCGGCATCGCCACCACCGCTTTCCCTTCAGTTCTTTCCTCCTCTAAGTCTAAATTCGCCACCGGTGTCCCGATTTCTGGCGTCGCCGTCAATGCGTCATCCCGGTTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCCCCGTACCTTGACGGCTCAGCCCCCGGTGATTTTGGCTTCGATCCTCTTCGTCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTCGTAGAGCACCAGCGCAGCATGGAGAAAGACACCGAGAAGAAGAAGTACCCTGGAGGTGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGTAAAGCTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTAGCTTTCGTTGGAATCTGTGTGCAACAAACGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGATCAATTTCGCCTTGA 741 53.71 MASNTLMSCGIATTAFPSVLSSSKSKFATGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP 246
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 2007952 2010425 + CmaCh15G004500.1 Cma15g00450 309600
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00450 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Cma15g00450 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 26 237 - -
Cma15g00450 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 237 IPR001344 GO:0009765|GO:0016020
Cma15g00450 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Cma15g00450 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma04g02584 Cma15g00450 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00450 Cma-Chr15:2007952 Cma01g00793 Cma-Chr1:4282436 3.84E-43 dispersed
Cma15g00450 Cma-Chr15:2007952 Cma04g02584 Cma-Chr4:17715041 2.63E-176 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00450 K08907 - csv:101211428 493.041