Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00486 ATGGAAGACTTCTGGTTGGGCCTTTTCGTCTGCATAATAAGGGATGTGGTTATATCAAATTGGGGAAAGATGGTCTCAGAATCTTGGTTTCGCAATCTATGGAAGCCGCCAAGGAAGCGTGATTCCACGCAGAAGGTTGTTATTGGAGTATTAGCTTTTGAAATTGCTAGTTTGATGTCCAAGTTGGTTCATCTATGGCAGGCTTTGAGCGATAAGCAAGTCGGGAGGTTGAGGGAAGAGATAACCAATTCGTTGGGAATAAAGAAGCTTGTGTCCGATGACGATGAGTATATCATACGTCTAATATGTGCTGAGATGACAGAGAGTTTAGCTCATGTGGCTAAATCTGTTGCCAGGCTTGGAAAGAAATGCAGTGATCCTAGTTTAAAAGGTTTCGAGCATGTTTTTGATAATTTAGTTCAATTTGGTTTTGATCCCTATGGCTGGATATACTCATGGAAGAAGATGGAAAAGAAAGTGAAGAAGATGGAGACATTTATTTCAGTGAATGCAAATTTGTATCAGGAGATGGAGATGCTTGCAGATCTTGAGCAAACTTTGAGGAGGATGAAGATTAACGACGACTTGGATGATACAAACCTAGATGAGTTTCGAAAGAAGGTTGAATGGAAGCAGCAGGAGGTGAAAAATTTGCGAGAGATGTCGCTTTGGAAAAGGACCTATGATTACACGATTCTTCTTCTTGCCAGATCCCTATGCACAATATTCAGTAGGATCAAATATGTATTTGGAATCGAGCAGAGTCTGGATAATGATTCACGAGATATGAGTTCTGACTCGATAGCACGTAGTCAATCAGTGTCTGCATTGATGCAATCGATGGTCCATCCCTCTGAGAATGGTCTTACTAAATTTGCATCGGGGCCCCTTAAGAGGTTTACAACTAAATCAGGGCCGATTTCAAAAACAGCTAAACGCAATAATGTTCATTCTGGTCCCCTTGGTGGCTCTATTACAAAATCGGGTCCTATTTCAGGCCCCGTTTCTGGAGCGAATAGAAACTTCAACTCTTATTCGGGTCCTCTCACAGGTTCAACAATAAGATCAGGTCCAATTTTTGGAATAGACAATACAACCAATCAGAAGAATTGGCTTGTCGGTGGCTACTCTTCCCTGTTTAATGGGAAGAAATATCATCAGAAGTCAAACAGACTGACTCAAGTTGGACCTTTCAAGGGATGCATGATATATGGCCCTAGTTCTACGGTTGTCAATTGCCTCATTAGTTCAAATGAGCATCATTCACAGCTTATCAATGGACCCAAAGACACTGGAAAGATTGTTGATCCTTGCAAGCAGTTGCTCCGTACCCATTGCCGATTGTTGGAAGCCCCACCTGAGACTCTAGGTGCTGCTGCTTTGGCACTGCACTATGCAAATGTCATTATTGTAATTGAGAAGCTTGCTGCATCTCCTCATTTGATTGGCCAAGATGCTAGAGATGATCTATACGATATGCTGCCAGCTAAAGTTCGAGCTAGCTTGAGGGCAGCTCTAAAACCATATGCCCAGAGCTTGGCTTCATCTGCGTATGACACAGTTCTTGCAGGAGAGTGGAATGAGGCAATGACTGGGATATTAGAGTGGCTTGCTCCACTTGCTCATAACATGGTTAGATGGCAATCTGAACGTAGTCTCGAACAACAGAATTTTGTTTCCAGGACCAATATGCTTCTTGTACAAACTCTTTTCTTCGCAAGTCTAGAAAAAACCGAAGCAATCATTACCGAACTTCTTGTTGGTCTGAATTACCTATGGAGGTTCGGTAGGGAACTCAATGCAAAAGCTCTAAGCGCGTGTGCCAGCAGTAGAATACATGATGAATATTTGGATATCAACAGTCGTCCAACGGCAGGAGGCGTCCTCAGCTCTACAAGATCGATATCCCCAATTGGAGGCAGCGTGAGAGAGAGAGAGCCATCGCTACTCCATTGCATTATCAATACTCCAATACCCGAAGTCATCATCGACAAACTAGTCGGCTCGCCGCACATGGCAGCGCCAAAGCCTCGTACCACTCGGTCCAGGTCTCACAGGGATGTCCCGGATTTGGAGAAGATGGACGGTGCTTACAGTTGGGACGCCCTCGAATGGACGAAGATTGAGGCCGTTCCGCGGTCGGTTTCGCGTGTTAACTTTGATTGCTTGCTTCAAGCCGAACAAGTGATTGCAGAGAGTGAAGGAACCATGGATGTTATTGCCCTTGGCACCATACCACTGGCGACAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATTCTGTCTCTCGCCAATCTGAAAAGTCTTCATCATCTAGGCGACTTCTTCAGAGGCGTAAAGTATACGATGCATTATTGAAGTGTATGAAACCTGCAAGAATATGGGATCTATATGCATTCAAGTCCGGTCCATCCAAGTATAGTAATACAGACCCAAAAGTTCGCTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCGTACGTGCATCGATGGGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTGACATCAATTCCAGTTATACTCTGTGCCAGACTTATCCATTTGCATTAGTTGTTCCAAAACACATTAGTGATGCAGAAATTTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGATTGCCTGTTGTTTCGTGGTGCAATCCTGGTACTGGAGCTGTTCTTGCGCGTTCCTCCCAACCCTTAGTTGGTCTTATGATGAATATGAGAAGTAATACTGATGAAAAGCTTGTTGCTGCACTTTGCTCGTATCTTGTTAGCGTTCAAGGGCCATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCTATGGGTGGTGGCTCGGAGTCTTCGTCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACCCGGCTCAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACACGGCGGATGGACTTGGGGTGGGGGTAATCTTAGTAGTATGTCTGCATCTGTATCAACACTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCCGCATGGATTGCTGCACGTGTTGCGTTGGAAAAAGCAACTGTACTAGTTCATTGCAGTGATGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTACTTGATCCTTATTACCGGACGATCGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTGGCATTTGGTCATCCTTTCTCAGATCGATCTGGCACGCCGACCATATCAGGAAGTGGTAACATGCCATATGAACTCTCTAGGCAGTCTTCAACTGGAAGTTTTTCTTCTTCACCTATGCGTCAGCCATCGGGATCATTCACATCTCCAGCTTCCAGTCCTCCTCCCTCACAAACATCAAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCTCAACTTTTGCGCATGTATCCCTTTGCTTTCGAGTTCTCTTCAGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTATATGGGCGTATTTAGCTGATTTACGAGCTTCGGAAGGAATTTCGCATGTGCATTACAACCTTTTCTATGATGCTACCAAACATGAAGGTCCACTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGCCCTAAAGAATCCCAAGCTGGAGAACTTGAAGTCAGATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGAGAAAGAAATAGCCGAGAGAAAAACGCAAGAGATGACGGCTGCCATGGAATCGATAAAATCAGAGTTACAGAACGAGAAGCAGTTAAGTATATCTGCTAGGAATATTGCAAAAAGTGCAAACAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGACATCGAGGGCGACCTGATGAAATCCAATCAGAAAATTCGTCCTGCTTCGAGAAGGGCTTCGCATCGTTCACTGCCTTCTAGTGAAGACAATGACCTCTCCCTTTCTATCACGGTTACACAAGATGATGTTCCGAACGACTCCCCCAGTCACGTCTGCGAAGCTCTTTGCCCATTGCGCACTCACGACAAAGCTTGCCGGTGGCCCGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATCGGACTAAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGGCTGTTCAAGGCAAACACACAACTAGGTATCCCTGGAATCCTCGTTCTCATCGTCATCATCTGA 4422 44.05 MEDFWLGLFVCIIRDVVISNWGKMVSESWFRNLWKPPRKRDSTQKVVIGVLAFEIASLMSKLVHLWQALSDKQVGRLREEITNSLGIKKLVSDDDEYIIRLICAEMTESLAHVAKSVARLGKKCSDPSLKGFEHVFDNLVQFGFDPYGWIYSWKKMEKKVKKMETFISVNANLYQEMEMLADLEQTLRRMKINDDLDDTNLDEFRKKVEWKQQEVKNLREMSLWKRTYDYTILLLARSLCTIFSRIKYVFGIEQSLDNDSRDMSSDSIARSQSVSALMQSMVHPSENGLTKFASGPLKRFTTKSGPISKTAKRNNVHSGPLGGSITKSGPISGPVSGANRNFNSYSGPLTGSTIRSGPIFGIDNTTNQKNWLVGGYSSLFNGKKYHQKSNRLTQVGPFKGCMIYGPSSTVVNCLISSNEHHSQLINGPKDTGKIVDPCKQLLRTHCRLLEAPPETLGAAALALHYANVIIVIEKLAASPHLIGQDARDDLYDMLPAKVRASLRAALKPYAQSLASSAYDTVLAGEWNEAMTGILEWLAPLAHNMVRWQSERSLEQQNFVSRTNMLLVQTLFFASLEKTEAIITELLVGLNYLWRFGRELNAKALSACASSRIHDEYLDINSRPTAGGVLSSTRSISPIGGSVREREPSLLHCIINTPIPEVIIDKLVGSPHMAAPKPRTTRSRSHRDVPDLEKMDGAYSWDALEWTKIEAVPRSVSRVNFDCLLQAEQVIAESEGTMDVIALGTIPLATIDKFNKIVVKTNSVSRQSEKSSSSRRLLQRRKVYDALLKCMKPARIWDLYAFKSGPSKYSNTDPKVRLLNEYFRLLGKGSVRASMGMIEDGSFTLSNELWRITDINSSYTLCQTYPFALVVPKHISDAEILQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSYLVSVQGPSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCSDGWDRTTQLVSLASLLLDPYYRTIAGFQALVEKDWLAFGHPFSDRSGTPTISGSGNMPYELSRQSSTGSFSSSPMRQPSGSFTSPASSPPPSQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSERQQCAVSEVCGCIWAYLADLRASEGISHVHYNLFYDATKHEGPLLPPAAALAPTLWPQFHLRWACPKESQAGELEVRCRKMAIKFSEMQKEKEIAERKTQEMTAAMESIKSELQNEKQLSISARNIAKSANKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKSNQKIRPASRRASHRSLPSSEDNDLSLSITVTQDDVPNDSPSHVCEALCPLRTHDKACRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGLFKANTQLGIPGILVLIVII 1473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2173158 2190138 + CmaCh15G004860.1 Cma15g00486 309636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00486 1473 MobiDBLite consensus disorder prediction 303 330 - -
Cma15g00486 1473 ProSitePatterns Tyrosine specific protein phosphatases active site. 1069 1079 IPR016130 GO:0016311|GO:0016791
Cma15g00486 1473 MobiDBLite consensus disorder prediction 1119 1166 - -
Cma15g00486 1473 PANTHER MYOTUBULARIN-RELATED 729 1457 IPR030564 -
Cma15g00486 1473 MobiDBLite consensus disorder prediction 303 322 - -
Cma15g00486 1473 ProSiteProfiles Myotubularin phosphatase domain. 826 1195 IPR010569 -
Cma15g00486 1473 CDD PTP-MTM-like 889 1183 - -
Cma15g00486 1473 Pfam Domain of unknown function (DUF3475) 50 106 IPR021864 GO:0045927
Cma15g00486 1473 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 843 1261 IPR029021 -
Cma15g00486 1473 Coils Coil 1282 1309 - -
Cma15g00486 1473 MobiDBLite consensus disorder prediction 1366 1387 - -
Cma15g00486 1473 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 729 1457 - -
Cma15g00486 1473 Coils Coil 201 221 - -
Cma15g00486 1473 Pfam Protein of unknown function (DUF668) 455 546 IPR007700 GO:0045927
Cma15g00486 1473 Pfam Myotubularin-like phosphatase domain 810 1197 IPR010569 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00486 Cma-Chr15:2173158 Cma18g01196 Cma-Chr18:9495677 1.38E-51 dispersed
Cma15g00486 Cma-Chr15:2173158 Cma04g02534 Cma-Chr4:17365265 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00486 K18081 - csv:101204839 1353.19