Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00569 ATGGAAGAGGCGATCCATCGATTTCTTGAACGATGGCTATTGTACCTTATAGTTATGTGCTTAAGCTTATCAGTCGCCGCTCTCTCTCCCGATGGAGAAGCGGTTCTTTCTCTCATTGCGGCTGCTGGTCCTTCTGCAACATCTTCTTCTTCTTCTGTTCTTGATTCTTGGAATCCATCTAGCCAAAACCCTTGTTCTTGGGAAGGAATCACTTGCTCTCCTCAGAACAGAGTCATTTCATTATCTCTCCCAAAAACGTTCCTAAACCTATCGTTTTTGCCTCCGGAGTTGTCCTCTCTATCTTCTCTGCAGCTTCTCAATCTATCCTCCACCAATGTATCTGGCTCAATCCCTCCTTCTTTTGGCCTACTCACTCATCTTCGCCTGTTGGACCTCTCCTCCAACAATCTCTATGGCCCTATTCCTCCTCAGCTTGGTTCTCTTTCATCGCTACAATTCCTTTTCCTTAATTCCAATAAACTGTCTGGTAAGATTCCTCCTCAGCTTGCCAATCTGACTTCTCTGCAAAGTCTTTGCCTCCAAGACAATCTGTTTAATGGTTCCATACCATCGCAGTTAGGTTCTTTGTTGTCTCTTCAAGAGTTTCGAATAGGAGGGAATCCATATCTTTCTGGTGACATTCCACCAGAAATTGGGCTGCTTACTAATCTCACTACATTTGGGGCGGCGGCTACTGCCCTCTCCGGCGCCTTACCGTCTACATTTGGGAACCTAATTAACCTCCAAACTTTGTCACTCTATGACACTGAGATGTCTGGTTCTATACCTCCTGAGTTGGGATTTTGTTCTGAGCTAAGGGATTTGTATTTACACATGAACAAGCTTACTGGAAATATTCCTCCTCAGTTGGGTAAGTTGCAGAAACTTACTAGTTTGTTTCTATGGGGTAATGCTCTATCAGGGTCGATACCGTCTGAAATTTCGAATTGTTCGGCTCTTGTGGTTTTTGATGCTTCAGAGAATGATATTTCTGGTGAAATCCCAAGTGATTTAGGGAAATTAGTCGTTCTTGAACAGCTTCATTTATCTGACAATTCGATTTCGGGTTCGATACCATGGCAGTTGGGGAACTGCACAAGCTTAACTGCTCTTCAGCTTGATAACAATCAATTATCAGGTGTAATTCCATCCCAACTTGGCAATTTAAAATCCCTGCAAAGCTTTTTCTTATGGGGCAATTCTGTATCAGGAACTGTACCATCTTCCTTTGGTAACTGCACTGAGTTATATGCTCTTGATCTTTCAAGAAACAAACTCTCTGGGATTATCCCAGAGGAAATTTTCAGCTTGAAGAAGTTGAGCAAGCTATTGCTCCTAGGAAATTCTTTATCTGGTGGGTTGCCTCCAAGTGTTGCAAATTGTCAATCATTGGTGAGATTGAGGCTTGGAGAAAACCAGCTTTCAGGCAAGATTCCAAAGGAGGTAGGCCAGTTGCAAAATCTTGTCTTTCTTGACTTGTATATGAATCGTTTTTCGGGTGGTCTTCCGTCTGAGATTGCTAATATTACAGTTCTTGAGCTACTTGATGTGCATAATAATTATATATCTGGGGAAATTCCTCACCAGCTTGGGGATTTGGTGAACTTGGAGCAGCTAGATCTCAGTCGGAACAGCTTCACTGGTGAAATTCCTCAGAGCTTTGGAAACTTCAGTTATTTGAATAAACTTATTCTCAGTAATAATCTACTGGCAGGGTCAATCCCAAAGTCTATTAAGAACCTGGAGAAACTAACTCTACTTGATTGGAGTAGCAACAATCTCTCTGGCAAGATACCACCAGAAATTGGTTACATGAAGAGCTTGTCTATCAGTCTGGACTTGAGCTCGAACGGGATAAGTGGAGAAATTCCCGAGTCGATATCGAGTTTGACACAGTTACAGTCACTTGATCTTTCCCATAACATGCTTTCAGGAAATATTAAAGTGTTGGGTCAGCTGACTAGTCTCACGTCCCTTAATATCTCCTACAACAATTTCTCTGGTCCAATGCCTGTAACACCATTTTTTAGAACACTATCAGAAGATGCATATTATCAAAACCTTAATCTTTGTGAATCACTTGATGGATTTACGTGTTCCTCGAGTTCATTGCGTAGAAATGGCTTGAAGTCTGCAAAAGCTGCTGCATTAATCTCGATCATTCTTGTTGCAGTTGTCGTCGTACTTTTTGCTTTGTGGATGCTAGTTTCACGAAATCGAAAGTACATGGACGAGAAATATTCAGGGATGTTGCCCTCGGCATCGGCTGCCGAGGACTTCTCTTATCCATGGACCTTCATCCCGTTTCAGAAGCTCAACTTTTCCATAGGTAACATCTTGGAATCCATGAAAGATGAAAATATAATTGGAAAAGGTTGTTCTGGTGTTGTTTATAGGGCAGATATGCCCAATGGTGAATTAGTTGCTGTAAAGAAACTATGGAAAACAAAGCAAGATGAAGAAGCAGTTGACTCTTGTGCTGCAGAGATTCAAATTCTCGGGCATATTCGACATCGTAACATCGTAAAGCTCATCGGTTATTGTTCCAATAGAAGTGTCAAGCTACTTCTCTACAACTACATTTCAAATGGTAATCTGCAACAACTCTTGCAAGGAAACAGAAATCTTGACTGGGAGACGAGGTATAAGATTGCGGTCGGGACAGCTCAGGGTCTGGCTTATCTTCATCATGATTGTGTGCCTGCAATTCTTCACAGAGATGTCAAGTGCAATAACATACTTCTAGACTCAAAGTTTGAAGCTTATTTGGCAGATTTTGGCCTGGCAAAGTTGATGAATGCTCCTAATTATCATCATGCGATTTCAAGAGTAGCCGGGTCTTACGGTTATATCGCCCCAGAATACGGATATACCATGAACATAACTGAAAAGAGCGATGTCTATAGTTATGGAGTTGTATTACTAGAGATACTAAGCGGCCGTAGTGCAATCGAGACACAAGTTGGAGATGGCCTTCACATTGTTGAGTGGGTAAAGAAGAAGATGGCAAGCTTCGAACCCGCGATAACAATACTCGACTCAAAGCTCCAAAGTTTACCAGATCAAATGGTGCAAGAAATGCTTCAAACACTTGGAATAGCAATGTTTTGTGTGAACTCCTCCCCAGCAGAAAGGCCAACAATGAAGGAAGTGGTAGCATTGTTGATGGAGGTGAAGAGTCCTCCAGAAGAATGGACCAAAACCTCCCAACCTCTAATCAAGCACTCCTCAATGAATGTCGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTCCACGATGCAGGCATGGATCTCGTGAAGCAGCAGCGAAGGAGCGGGAATAAGTGGATCTGTGCAGTCTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCGATGGCTAAAGACGTCCGTAAGTTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGACGAAAGTCGATGAGATATTTGATGAGGAAATTGTTGACGAGGATCAGCTTGATTTCAACGAGAAGAGAAAAAGACGTAGCGATTGGAGTGAGTACCTCGATCTCGAGGAAGATCGCAGCCAAACTGGAAGAGAAAACGAACGAGAATTAGGGAGTGATTTTGCTGACGGAAAGATTGTGACGGAGCTTCCAGAAGAAAAAACCAGGAAGCACTGTTCAACGAGCTGTTCAAACAGGCCGGAAAGTGGAGAAGGAAAAATATTTTACAGACCAGTTTTCCCGAAGAGGACACACATTGCCAAGAATTCAGCCATTCAAGCATCAAAATGGAGTAAAGGCGTCCGAGAAGATGATGAAAAAGTTTCGTTGAAAGCCAAGCATCATCTAAGCTCCAAAGATGAGATTCGAAACTGGGAATCGCTGTCGACAAAAGACGATGAAAATGCTTGCAGCAAGGTAGGAGGTCCTTCCAAGTGGAGTGAATACATAACTGAAGATGACAACTGCGGAGGCAGAAAGGGAGAAAATATGGGAACAGAACAGGACATGGATACCTTGAAGATGATCATAAATGATGAAATTGTTGAAGATGATATCCACCCTGATTTCAAATGA 4068 42.65 MEEAIHRFLERWLLYLIVMCLSLSVAALSPDGEAVLSLIAAAGPSATSSSSSVLDSWNPSSQNPCSWEGITCSPQNRVISLSLPKTFLNLSFLPPELSSLSSLQLLNLSSTNVSGSIPPSFGLLTHLRLLDLSSNNLYGPIPPQLGSLSSLQFLFLNSNKLSGKIPPQLANLTSLQSLCLQDNLFNGSIPSQLGSLLSLQEFRIGGNPYLSGDIPPEIGLLTNLTTFGAAATALSGALPSTFGNLINLQTLSLYDTEMSGSIPPELGFCSELRDLYLHMNKLTGNIPPQLGKLQKLTSLFLWGNALSGSIPSEISNCSALVVFDASENDISGEIPSDLGKLVVLEQLHLSDNSISGSIPWQLGNCTSLTALQLDNNQLSGVIPSQLGNLKSLQSFFLWGNSVSGTVPSSFGNCTELYALDLSRNKLSGIIPEEIFSLKKLSKLLLLGNSLSGGLPPSVANCQSLVRLRLGENQLSGKIPKEVGQLQNLVFLDLYMNRFSGGLPSEIANITVLELLDVHNNYISGEIPHQLGDLVNLEQLDLSRNSFTGEIPQSFGNFSYLNKLILSNNLLAGSIPKSIKNLEKLTLLDWSSNNLSGKIPPEIGYMKSLSISLDLSSNGISGEIPESISSLTQLQSLDLSHNMLSGNIKVLGQLTSLTSLNISYNNFSGPMPVTPFFRTLSEDAYYQNLNLCESLDGFTCSSSSLRRNGLKSAKAAALISIILVAVVVVLFALWMLVSRNRKYMDEKYSGMLPSASAAEDFSYPWTFIPFQKLNFSIGNILESMKDENIIGKGCSGVVYRADMPNGELVAVKKLWKTKQDEEAVDSCAAEIQILGHIRHRNIVKLIGYCSNRSVKLLLYNYISNGNLQQLLQGNRNLDWETRYKIAVGTAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMNAPNYHHAISRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAIETQVGDGLHIVEWVKKKMASFEPAITILDSKLQSLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEWTKTSQPLIKHSSMNVDDLHRRPVFSMLHDAGMDLVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELGSDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKNSAIQASKWSKGVREDDEKVSLKAKHHLSSKDEIRNWESLSTKDDENACSKVGGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMIINDEIVEDDIHPDFK 1355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2664219 2670702 - CmaCh15G005690.1 Cma15g00569 309719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00569 1355 Pfam MRN-interacting protein 1102 1187 IPR032739 -
Cma15g00569 1355 PRINTS Leucine-rich repeat signature 416 429 - -
Cma15g00569 1355 PRINTS Leucine-rich repeat signature 630 643 - -
Cma15g00569 1355 Pfam Protein kinase domain 785 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00569 1355 PANTHER - 12 1076 - -
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 191 284 IPR032675 -
Cma15g00569 1355 ProSiteProfiles Protein kinase domain profile. 783 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00569 1355 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
Cma15g00569 1355 SUPERFAMILY RNI-like 381 678 - -
Cma15g00569 1355 PANTHER UNNAMED PRODUCT 12 1076 - -
Cma15g00569 1355 SUPERFAMILY RNI-like 106 460 - -
Cma15g00569 1355 Pfam Leucine rich repeat 611 666 IPR001611 GO:0005515
Cma15g00569 1355 Pfam Leucine rich repeat 391 450 IPR001611 GO:0005515
Cma15g00569 1355 Gene3D Phosphorylase Kinase; domain 1 761 860 - -
Cma15g00569 1355 SMART LRR_typ_2 389 412 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 124 147 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 172 196 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 148 171 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 341 365 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 413 437 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 533 556 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 581 605 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 293 317 IPR003591 -
Cma15g00569 1355 SMART LRR_typ_2 630 653 IPR003591 -
Cma15g00569 1355 Pfam Leucine Rich Repeat 535 557 IPR001611 GO:0005515
Cma15g00569 1355 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Cma15g00569 1355 SUPERFAMILY Protein kinase-like (PK-like) 767 1056 IPR011009 -
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 43 190 IPR032675 -
Cma15g00569 1355 SMART serkin_6 783 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00569 1355 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
Cma15g00569 1355 Gene3D Transferase(Phosphotransferase) domain 1 861 1078 - -
Cma15g00569 1355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 903 915 IPR008271 GO:0004672|GO:0006468
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 285 382 IPR032675 -
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 383 479 IPR032675 -
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 480 573 IPR032675 -
Cma15g00569 1355 Gene3D Ribonuclease Inhibitor 574 701 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00569 Cma-Chr15:2664219 Cma17g00118 Cma-Chr17:586539 0 dispersed
Cma15g00569 Cma-Chr15:2664219 Cma04g02466 Cma-Chr4:16959264 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69141 PF00069 Pkinase 3.50E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00569 - - csv:101212866 1844.71