Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00604 ATGGCTGCTACTTCTCCGGCCAACATTTTCATACTTGCAGGGCAGAGCAACATGGCAGGCCGAGGCGGCGTCTCCAAAGACCCAACCACAGACAAAAACGTGTGGGATGGTTATATCCCCCCAGAATCTCAACCCAACCAATCCATCTTTCGATTCACTGCTGATATGGTATGGGAGCAAGCCCGTGAGCCACTCCACTGGGACATCGACGTTGTAAAGACCAATGGGGTTGGACCCGGCATGCCTTTTGCCAATGAGCTTTTGGCCAAAGCTGGCCCTAGCATTGGCACCATCGGTCTGGTTCCGTGTGCCATTGGAGGATCTCACTTGAGAGAATGGGTTAAAGGGACTGATAGGTACACCAAATTGGTTGAACGGATGAAACGTTCGGAAGAACATGGTGGGAAAGTTAAGGGATTCTTTTGGTATCAAGGAGAGTCCGATGCGGCGGTGGAAGAAGAAGCTAAGTCGTACGAGAGAGAGCTGAGTAAATTCTTCACGGACTTGCGTGCAGACGTGAACCATCCAGATCTACCCATCATCCTGGTGAAGATAGTGACCCATGATTTCTTCATAAGCCCAGATTTTGAGTTCAAAGACGAGGTATGGAATGCTCAGGAGGCAGTCACGCAGAAGCTACCAAACGTAAGAATGGTGGACGGTAGGGTGGCGGTGGGGAACTTTGATGAAGGGCTTAACGAAGATAGAGTATTCCCAAACTACTTCTCTACCCTTTCTCCTCTAATTTTCCCTCTCTCGCTTTCTTTCCCATGGCCTTTCCTCGTCTCTGTTGATTCCATGGCGGATATGGATTTCGTCGAGGGTGTTGGAGAGAGTTCTTCGCCGCCTCGAAGCTTCGGTGGCTTCTGTGCTGTCCACGATGTTCGGAACGATGTTTATACTCGGTTAGTTGAGCGTGGACATGAGGAGGCAGTTTCTAATCCCCAATTTCGTGAGAACTTGGATGCTCACTTCAATCGCTTGCCTCCGAGTTATGGACTTGATATTAACATGGAGAAGGTGGAAGATGTTTTGTTACATCTAAAGCTTCTTTCCCTGGCTAAGGATCCTGAGAAGTGCCCTGTTTACCACATTCGTTTTCTGGAGCACTTAAGTACTAAGTCAGATGGCAATGATGATCACGTTTTTATTGATAGTATTCTATTAAGTGGCTCATCTGATGAAGCAGCTGATAGAAGACTTCCACTGTCGCACGAGAGAACTCAAGGAAACATAATTGACTTTGAGCCTTGTTCCAAGCTTGAGGACTTAAATTTGGATGTTGGAAAGAACTCAAAGGCCATGGATGAGAGATATTATAAGGACAATTTTTCCAAAAGGCAGCGCAGTATTGCACATGTTCCAATACATGAAGTGATATTTTCAACGATTGACAAGCCAAAGCTTCTTAGCCAGCTTTCTGCTTTGCTTTCTGATATAGGACTTAACATCCGAGAAGCACATGTGTTTTCGACATCTGATGAATACTCCTTGGATGTATTTGTCGTGGATGGATGGCCTGTTGAGGAAACTGGTGGTTTGTATGAAGCTATGGAAAAAGCAGTGGCTAGATATGAGGGGTCATGGTCTGGTTCTTCACATTCTCATCCAGCAGTCAAGAAAACATTAGACGCCCAGAAAAAAACAGAAGATTGGGAAATAAATAGACGGTTACTGAAGATAGGTGAAAGAATTGCATCTGGATCTTGTGGTGATTTGTATCATGGATTATATCTTGGTCATGATGTAGCTGTCAAGATATTAAGATCTGAAGATCTAAATGATGATTTAGAGGATGAATTCAATCAAGAAGTGGCAATTCTCAGGAAGGTCCAGCACAAAAATGTAGTTCGTTTTATAGGTGCGTGTACGAACTCTCCACATTTGTGTATTGTAACAGAGTATATGCCAGGAGGGAGTCTTTATGATTACTTGCACAAGAATCATTGCGTGTTGAAGCTCTCACAACTGCTGAAGTTTGCTATTGATGTTTGTGAAGGAATGGAGTACTTACATTTAAATGACATTATTCATAGAGACTTGAAGACAGCAAACCTGCTAATGAACACTCAACATGTTGTGAAGGTGGCAGATTTTGGAGTTGCACGATACCAGAGTCAAGGAGTAATGACAGCAGAAACTGGAACATACAGATGGATGGCACCTGAGGTAATAAATCATCTGCCATATGATCAGAAAGCAGATATTTTCAGTTTTGCGATTGTGCTTTGGGAACTAGTAACAGCAAAGGTTCCGTATGATTCCATGACACCATTACAAGCCGCCCTTGGAGTAAGACAGGGACTGCGTCCAGATCTTCCCAAAAATGCTCACCCCAAATTGTTGGATTTGATGCGACGATGTTGGGATGCAGAACCTGAAAATCGGCCTCCATTTACTGAGATAAAAGTTGAACTTGAAAATCTGCTCGAAGAAGTTCAGATGTGTACAAAATATGAAGAAAATTATGCAGCAGTTAATGGCAGCTAA 2490 43.98 MAATSPANIFILAGQSNMAGRGGVSKDPTTDKNVWDGYIPPESQPNQSIFRFTADMVWEQAREPLHWDIDVVKTNGVGPGMPFANELLAKAGPSIGTIGLVPCAIGGSHLREWVKGTDRYTKLVERMKRSEEHGGKVKGFFWYQGESDAAVEEEAKSYERELSKFFTDLRADVNHPDLPIILVKIVTHDFFISPDFEFKDEVWNAQEAVTQKLPNVRMVDGRVAVGNFDEGLNEDRVFPNYFSTLSPLIFPLSLSFPWPFLVSVDSMADMDFVEGVGESSSPPRSFGGFCAVHDVRNDVYTRLVERGHEEAVSNPQFRENLDAHFNRLPPSYGLDINMEKVEDVLLHLKLLSLAKDPEKCPVYHIRFLEHLSTKSDGNDDHVFIDSILLSGSSDEAADRRLPLSHERTQGNIIDFEPCSKLEDLNLDVGKNSKAMDERYYKDNFSKRQRSIAHVPIHEVIFSTIDKPKLLSQLSALLSDIGLNIREAHVFSTSDEYSLDVFVVDGWPVEETGGLYEAMEKAVARYEGSWSGSSHSHPAVKKTLDAQKKTEDWEINRRLLKIGERIASGSCGDLYHGLYLGHDVAVKILRSEDLNDDLEDEFNQEVAILRKVQHKNVVRFIGACTNSPHLCIVTEYMPGGSLYDYLHKNHCVLKLSQLLKFAIDVCEGMEYLHLNDIIHRDLKTANLLMNTQHVVKVADFGVARYQSQGVMTAETGTYRWMAPEVINHLPYDQKADIFSFAIVLWELVTAKVPYDSMTPLQAALGVRQGLRPDLPKNAHPKLLDLMRRCWDAEPENRPPFTEIKVELENLLEEVQMCTKYEENYAAVNGS 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2857022 2870820 + CmaCh15G006040.1 Cma15g00604 309754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00604 829 ProSiteProfiles ACT domain profile. 458 532 IPR002912 -
Cma15g00604 829 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 279 818 - -
Cma15g00604 829 Pfam Protein tyrosine and serine/threonine kinase 559 805 IPR001245 GO:0004672|GO:0006468
Cma15g00604 829 SUPERFAMILY Protein kinase-like (PK-like) 545 811 IPR011009 -
Cma15g00604 829 Gene3D Phosphorylase Kinase; domain 1 525 636 - -
Cma15g00604 829 Gene3D SGNH hydrolase 5 241 IPR036514 -
Cma15g00604 829 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 7 221 IPR005181 -
Cma15g00604 829 SMART serkin_6 559 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00604 829 CDD STKc_MAP3K-like 565 802 - -
Cma15g00604 829 SUPERFAMILY ACT-like 457 526 IPR045865 -
Cma15g00604 829 ProSiteProfiles Protein kinase domain profile. 559 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00604 829 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 279 818 - -
Cma15g00604 829 SUPERFAMILY SGNH hydrolase 8 220 - -
Cma15g00604 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Cma15g00604 829 Gene3D Transferase(Phosphotransferase) domain 1 637 827 - -
Cma15g00604 829 PRINTS Tyrosine kinase catalytic domain signature 633 646 IPR001245 GO:0004672|GO:0006468
Cma15g00604 829 PRINTS Tyrosine kinase catalytic domain signature 734 756 IPR001245 GO:0004672|GO:0006468
Cma15g00604 829 PRINTS Tyrosine kinase catalytic domain signature 777 799 IPR001245 GO:0004672|GO:0006468
Cma15g00604 829 PRINTS Tyrosine kinase catalytic domain signature 670 688 IPR001245 GO:0004672|GO:0006468
Cma15g00604 829 PRINTS Tyrosine kinase catalytic domain signature 715 725 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01811 Cma-Chr1:12042083 Cma15g00604 Cma-Chr15:2857022 1.36E-61 dispersed
Cma15g00604 Cma-Chr15:2857022 Cma19g00758 Cma-Chr19:7517998 6.43E-167 dispersed
Cma19g00581 Cma-Chr19:6485869 Cma15g00604 Cma-Chr15:2857022 2.10E-54 dispersed
Cma15g00604 Cma-Chr15:2857022 Cma04g02442 Cma-Chr4:16801769 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69143 PF07714 PK_Tyr_Ser-Thr 1.40E-71 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00604 - - mcha:111011813 1005.36