Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00615 ATGATGAACTTCTCCGGCGGCGCCTTCACATTCGACGCTGCCGTCAAAACCTTCCAATCCAGAGAGATTCTCCGGTTTTACAGCGGCATTTCGGTAGTCACTGTCGGAGTTTGGTCTATGGGAAATATCATCTCCTCTGCTTTAATTACTCAGAGAATTCAGAATCTGACTGCCATAGATTTCCTGCGCTCTCTACCTCACGCACCGCCGAACGCCCAAAACAGAGAACGCACAGTGGCGGAGTTGTGTGGATTTCCATCGTCTTCAATTCGAAGCCGAAATCTCCTGTTCTTCCATTTTAGTATGTCGACTTTAACGATCCTCCTTTTTTTCTTGATTCCCTCCAACTTTGTCCGTCTTTCTCTTTGTTTCTTGCCCGATCAAAACGTCACCCTCTCCGGTGATGCGCATTTCAGAAACAATGCCATGCTTCTCACCCAAGAAACCAATTGCCTTCCCTTTTCTTCTTCCATCTCCCCTGCATCCTCTGCCTCTGTCTCTTCTGGCGTTGGCGCCGCCTTCTACAACAACCCGATTCGCTTTCTTGATTTCTCCACCAATTCCACCGCTTCTTTCTCCACTAAATTCTTCCTCACCGTCGTTCCCACCTTACTTTGCCCTTCCGCCGATGGAATCGCTTTCCTCATCACCTCCGATTCCGAATCTTTCAGCCGCTCTAATGGGTATATGGGCCTTCCCGACCCCCCGCCAAATTCCCACCACTCTTTCATCGCTGTCGAATTCGACACAAGTTTCAACGCTGATCTTGGAGACATTAATGACAACCATCTTGGCTTTGATGTCAACTCTGCGACCTCTTTGTCCTCTGTGGATTTTGGGTCCAGGGGCATTTTCCTCAAAAATGGGAGAAAGATTACCGCATGGATTGAGTACAAGGAAGACTCGAAAAAGATCCATGTCTGGGTTGGCTATTCGCAGACAAGGCCTGAAAATCCTCTTCTTGTTGTGGAGGTTGATCTTTCCAAGCAATTTAAGGAGTTCATGTATGTGGGGTTCTCTGCTTCTAACGGACGGGGCTCTGCTCTTTACATTGTTGATCAATGGAAATTTAGAACTTTTGGGTTGGTACCTTCTTTGAGTTCTGTTGATACCATTACTGAAGGAGACTGTTTCATGTGCTCATCGGAGGATTCGAGTGCGAATAGCAATCGTTCTGTCAACGCTCGTCAACGGAGGAAGATGATTGGAGAGATAACCCTTGGTTTAGGAGGTTTAATTGCATTTCTTTGCTCTATTATTGTCATTGTTGGTTTGGTTAGTTTTATCTTGATGGATAAATTGAGAGGTAGAATGTGCATATGCATAGCAACTCCTGAAACCAGTCAAGTTGAGACGAACAGAGTTCCATTGAGATTATCCCTTGGGGAGGTAAAGTTGGCTACAATGGACTTTAATGAAGATAGAATTGTTGGGAGAGGTGGTTCTGCAACTGTTTACAAAGGATGTCTTCCAGTCAGTGGAGAAGTGGCTGTTAAACGATTCGCACCAGACATGGCGAACAATCGTATGCACAATCCTTTCACCACAGAGTTTGCAACTATGGCGGGGTGCTTACGACACAAGAATTTGGTTCAGCTTCATGGATGGTGTTGTGAGGCAAACGAGTTGGTTCTTGTTTACGAGTTCTTGGCCAATGGTAGCCTCGGCGAACTTCTTCATAAGCGCTCACGGAATTCACAGTTTGTTCTTCCTTGGAAGAAAAGGGTTTCCATAGTTCTTGGGATTGCTTCTGCATTGACATATCTCCATGAAGAGTATGAGAGACAGATTATCCATAGAGATGTCAAGACCTGCAACATTATGATTGATGCAGATTTCAACGGTAAACTCGGGGATTTCGGTCTAGCAGAAGTGTATGCACGCAATTCACTCAGAAGGGAAGCAACTATACCAGCTGGAACAATGGGATATCTCGCACCTGAATACGTTTATTCTGGAGTTCCCACTGTTGAAACCGATATTTACAGCTTTGGAGTCGTGTTGCTCGAAGTAGCCTCGGGAAGGAGGGCTGTAAACGAAGAGGGGACCGTGCTGGTCGATTGGATTTGGAATCTATGGGAAACGGGGACACTAACTGAAGCATCTGATTCAAAGTTGATGGGAAACTACAATGTAGTAGAAATGGAGAGAATGCTAATGGTGGGACTGTTTTGTGTACACCCAAATTATGTTAAGAGGCCAACTGTGCGAGAAGCTGCAAAGATCCTTAAAGGGAAAGCACCACTTCCTGTACTGCCACCAAGGAAGCCAAGGGTCCGCATCAAGCCTGTTGTTCCTGATGATTCTGAGGATAGCATAGATAGTCCTCGTGACGATATTCCCAGCCTCGACGAGTGGATGACCCCCAAGAGTGAATTTTATAGCTGA 2388 45.9 MMNFSGGAFTFDAAVKTFQSREILRFYSGISVVTVGVWSMGNIISSALITQRIQNLTAIDFLRSLPHAPPNAQNRERTVAELCGFPSSSIRSRNLLFFHFSMSTLTILLFFLIPSNFVRLSLCFLPDQNVTLSGDAHFRNNAMLLTQETNCLPFSSSISPASSASVSSGVGAAFYNNPIRFLDFSTNSTASFSTKFFLTVVPTLLCPSADGIAFLITSDSESFSRSNGYMGLPDPPPNSHHSFIAVEFDTSFNADLGDINDNHLGFDVNSATSLSSVDFGSRGIFLKNGRKITAWIEYKEDSKKIHVWVGYSQTRPENPLLVVEVDLSKQFKEFMYVGFSASNGRGSALYIVDQWKFRTFGLVPSLSSVDTITEGDCFMCSSEDSSANSNRSVNARQRRKMIGEITLGLGGLIAFLCSIIVIVGLVSFILMDKLRGRMCICIATPETSQVETNRVPLRLSLGEVKLATMDFNEDRIVGRGGSATVYKGCLPVSGEVAVKRFAPDMANNRMHNPFTTEFATMAGCLRHKNLVQLHGWCCEANELVLVYEFLANGSLGELLHKRSRNSQFVLPWKKRVSIVLGIASALTYLHEEYERQIIHRDVKTCNIMIDADFNGKLGDFGLAEVYARNSLRREATIPAGTMGYLAPEYVYSGVPTVETDIYSFGVVLLEVASGRRAVNEEGTVLVDWIWNLWETGTLTEASDSKLMGNYNVVEMERMLMVGLFCVHPNYVKRPTVREAAKILKGKAPLPVLPPRKPRVRIKPVVPDDSEDSIDSPRDDIPSLDEWMTPKSEFYS 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2910497 2913501 + CmaCh15G006150.1 Cma15g00615 309765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00615 795 SUPERFAMILY Protein kinase-like (PK-like) 456 761 IPR011009 -
Cma15g00615 795 SMART serkin_6 471 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00615 795 SUPERFAMILY Concanavalin A-like lectins/glucanases 109 363 IPR013320 -
Cma15g00615 795 PANTHER - 116 761 - -
Cma15g00615 795 Gene3D Phosphorylase Kinase; domain 1 440 549 - -
Cma15g00615 795 ProSiteProfiles Protein kinase domain profile. 471 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00615 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Cma15g00615 795 Pfam Protein kinase domain 471 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma15g00615 795 Pfam Legume lectin domain 126 359 IPR001220 GO:0030246
Cma15g00615 795 CDD lectin_legume_LecRK_Arcelin_ConA 127 361 IPR001220 GO:0030246
Cma15g00615 795 Gene3D Transferase(Phosphotransferase) domain 1 550 748 - -
Cma15g00615 795 MobiDBLite consensus disorder prediction 760 785 - -
Cma15g00615 795 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 116 761 - -
Cma15g00615 795 MobiDBLite consensus disorder prediction 752 795 - -
Cma15g00615 795 ProSitePatterns Legume lectins beta-chain signature. 244 250 IPR019825 -
Cma15g00615 795 Gene3D - 117 365 - -
Cma15g00615 795 ProSitePatterns Protein kinases ATP-binding region signature. 477 499 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00615 Cma-Chr15:2910497 Cma16g00960 Cma-Chr16:7435658 8.87E-144 dispersed
Cma15g00615 Cma-Chr15:2910497 Cma04g02432 Cma-Chr4:16754469 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69144 PF00069 Pkinase 1.20E-39 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00615 - - cmos:111444851 1353.19