Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00634 ATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCCGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAACGTGGAGGCAGCCGTTTACACTGTCGGCGACTCCGGTGGATGGACTTTTAACGTCCAAGGCTGGCCCAACGGCAAACTCTTTCGTGCTGGCGATACTCTCACAGGAGATTCCACCGCCGCCGGTCGCCGTCGCCTCCGCCACCACCACCTCATCTGTGGTGCTGCTCCAAGATCCAAGTCCTGCAACTCCACGGAGGAATCTTCGTTCCCCTTTACCTCTGCCTCTGCTCCCCCGCTTGGGGATGCCGATCAAGAGGCCACTCTACAACCGCCTGAACCATCGTCCTTTCCCCCGGCGCCGGTAGTTTCAGAAACTATAATGTCTTCGAGGGATCCTAACGCCATCTTCAGTGGAGGCGGTATCAGTTTTCTCAATGGAAATCAGACTGGAAAGTTCAGCTATGGGTATTCTAGTTTCAAAGGAAAAAGGGCTTCAATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGACGGGCAGATGGTCGCTTTTTTTGGCGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCACCCAGACTTTATTAAAGATACAAAGACTGCAATTATTGAGGTCTTTAAACAGACCGATGCCGATTATATTAATGAAGAGAAAGGGCAGCAGAAGGATGCTGGCTCAACTGCATCAACTGCTGTTCTGTTAGGGGATCGTCTCCTCGTTGCAAATGTTGGGGATTCCAGAGTAGTTGCGTCTAGAGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGATGAACGAGAAAGGATTGAACAAGCTGGAGGTTTCATTATTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACCATATGTTGTTGCTGATCCTGAAATACAGGTTTGTATTTTGAATGTTTATCTGTTTCCTTATGCTTTTATAATTGCTTCTGGAAATCTGGAAGAGAGCTTTGCTTTTGCTGTTTTTACCTGCTTCCTTTACACTGATGTCCACTCATCCGAACAGGAAGAAGAAATTGACGGTGTAGATTTTATTATCATTGCAAGTGATGGACTTTGGAATGTTTTATCAAATGAGGATGCTGTAGCATTGGTGCAACACATCCAAGATACAGAAGTGGCATCAAGAACACTAATCCAAGAAGCATATGCTCGAGGGAGTTCCGACAACATTACATGTGTCATCGTCTCCACCAATATGGTGAACGATACTGAGTATTACGACATTCTCGGTGTTCGTCCTTCTGCTTCCGAGGACGAGATTCGTAAAGCCTATTATCTTAAGGCGAAACAAGTCCATCCGGATAAGAATTTGAATGATCCTCAAGCTGCTGAAAGGTTTCAGGCAAGTATACTCTGGCTCATCGTGTTAGGTGAAGCCTATCAAGTTTTGAGTGATGCAGTCCAAAGAGATGCATATGATAGGAATGGGAAGCACAGTATTACTAGGGAATCCATGCTTGACCCTACTGCTGTCTTTGCACTTCTATTTGGAAGTGAATTGTTTGAGGACTATATTGGACATTTAGCTGTAGCATCAATGGCTTCATCTGAATTAGAGAGCGAAACTGGTGACAAAGACGGATTCTTACGGCATGCTGAATCTGAAGCCAAAAGACTCTCTAATGCGGGTGCTTTTCAGTTGTTACAACTTCAAGATGATATTTGCCGGCAGTATAAAATGGATGGTAGTGGCCCTGAAAATGATATTGAATCGCATATTAGATCGAATAAAGACACATTCCTCAATTCTTTGTGGAAGCTTAACGTGGTGGACATAGAACTGACTCTTATAAATGTGTGCCAGATGGTGCTACGGGATAATACTGTAAAAAGGGAAGAACTAAAAGCTCGTGCTCTGGCTCTGAAGATTCTTGGAAATATATTCCAGGAGAAGCAAGCACAAAATGGTGGAACATCAAGAAAGAAAAGTGCTGCTGCAGTAGATGACGATGGAACGAGTTCAGAGAGCAGCGACGATGAGGATGATCCCCGAAGACCACTATCTTATCGAACTCCTTTTCTTACTCAGGCAAGTTGA 2187 44.99 MGRGSAVGSALVVAAVIGLVMMSQLENVEAAVYTVGDSGGWTFNVQGWPNGKLFRAGDTLTGDSTAAGRRRLRHHHLICGAAPRSKSCNSTEESSFPFTSASAPPLGDADQEATLQPPEPSSFPPAPVVSETIMSSRDPNAIFSGGGISFLNGNQTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTKTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFIIWAGTWRVGGILAVSRAFGDKLLKPYVVADPEIQVCILNVYLFPYAFIIASGNLEESFAFAVFTCFLYTDVHSSEQEEEIDGVDFIIIASDGLWNVLSNEDAVALVQHIQDTEVASRTLIQEAYARGSSDNITCVIVSTNMVNDTEYYDILGVRPSASEDEIRKAYYLKAKQVHPDKNLNDPQAAERFQASILWLIVLGEAYQVLSDAVQRDAYDRNGKHSITRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELESETGDKDGFLRHAESEAKRLSNAGAFQLLQLQDDICRQYKMDGSGPENDIESHIRSNKDTFLNSLWKLNVVDIELTLINVCQMVLRDNTVKREELKARALALKILGNIFQEKQAQNGGTSRKKSAAAVDDDGTSSESSDDEDDPRRPLSYRTPFLTQAS 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2995479 3007156 + CmaCh15G006340.1 Cma15g00634 309784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00634 728 Pfam DnaJ domain 454 523 IPR001623 -
Cma15g00634 728 PANTHER ALPHABET, ISOFORM E-RELATED 384 446 - -
Cma15g00634 728 ProSitePatterns PPM-type phosphatase domain signature. 191 199 IPR000222 GO:0043169
Cma15g00634 728 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 384 446 - -
Cma15g00634 728 SMART dnaj_3 453 518 IPR001623 -
Cma15g00634 728 Pfam X-domain of DnaJ-containing 596 688 IPR026894 -
Cma15g00634 728 SUPERFAMILY Cupredoxins 31 61 IPR008972 -
Cma15g00634 728 Gene3D DnaJ domain 448 540 IPR036869 -
Cma15g00634 728 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 122 350 - -
Cma15g00634 728 CDD DnaJ 454 515 IPR001623 -
Cma15g00634 728 MobiDBLite consensus disorder prediction 683 728 - -
Cma15g00634 728 PANTHER ALPHABET, ISOFORM E-RELATED 122 350 - -
Cma15g00634 728 PRINTS DnaJ domain signature 474 489 IPR001623 -
Cma15g00634 728 PRINTS DnaJ domain signature 456 474 IPR001623 -
Cma15g00634 728 PRINTS DnaJ domain signature 518 537 IPR001623 -
Cma15g00634 728 PRINTS DnaJ domain signature 498 518 IPR001623 -
Cma15g00634 728 ProSiteProfiles PPM-type phosphatase domain profile. 160 447 IPR001932 -
Cma15g00634 728 SUPERFAMILY Chaperone J-domain 448 556 IPR036869 -
Cma15g00634 728 SUPERFAMILY PP2C-like 156 446 IPR036457 -
Cma15g00634 728 MobiDBLite consensus disorder prediction 84 101 - -
Cma15g00634 728 Pfam Protein phosphatase 2C 161 346 IPR001932 -
Cma15g00634 728 Pfam Protein phosphatase 2C 391 440 IPR001932 -
Cma15g00634 728 CDD PP2Cc 159 445 IPR001932 -
Cma15g00634 728 SMART PP2C_4 150 445 IPR001932 -
Cma15g00634 728 MobiDBLite consensus disorder prediction 83 130 - -
Cma15g00634 728 Gene3D - 153 447 IPR036457 -
Cma15g00634 728 ProSiteProfiles dnaJ domain profile. 454 526 IPR001623 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma15g00634 Cma-Chr15:2995479 Cma16g00066 Cma-Chr16:282142 4.09E-100 dispersed
Cma15g00634 Cma-Chr15:2995479 Cma04g02414 Cma-Chr4:16659574 1.05E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00634 K17506 - jre:108981366 746.503