Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma15g00724 ATGGACTCAAGGGGCCATTCCAATGGTGGAGAACCTGAAACAAAAGAGATGGACATTAGAAATCTTTCATCTTCGCGCAACAATACTCAGTATATTCACAAGGTGGGGGTTCCACCGAAGCAAGGTTTCTTCAACGAATTTAAAGCAAGAGTGAAAGAGACTTTCTTTGCAGATGAGCCTCTGCGAACCTTCAAGGATCAATCGAAGTCCCGAAAGTTGGTCCTGGGAATTCAGGCTATCTTCCCGATATTTGAATGGGGGAGGAATTACAATCTGACAAAATTTAGAGGAGATATAATTGCTGGACTCACTATTGCAAGTCTCTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGTTTATACTCCAGTTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCTAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACAATGCTTCAAAAGGAGATTGATTACCATACACATCCAGAAGCGTATCTGCGGCTTGCATTTACAGCTACGTTTTTTGCTGGGATCACCCAAGCCACTCTAGGGATGCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAACTTAAAGGCTTTCTTGGTATTAAAAATTTTACAAAGAAAACAGACATCATCTCTGTTATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACGATAGTCATTGGAGTAGCTTTTCTAAGTTTTCTTCTATTAGCCAAGTATATTGGAAAGAAGAACAAGAGCCTTTTTTGGGTGCCTGCAATTGCTCCATTAATATCAGTCATTCTGTCCACCTTTTTTGTTTACATTACCCATGCAGACCAGAAAGGTGTCGCAATTGTGAAACACATAGAGAAAGGAATCAATCCTTCATCAGTGAAGCAGATCTACTTCACTGGTGAGTACCTCCTTAAAGGGTTCAGGATTGGCGCTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAATGTTATTGGTTCACTGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCGAATGCTATTCTAGCTGCCATCATTATCACTGCTGTGATCAACTTAATTGACATTCAGGCAGCAATTTTGCTTTGGAAGATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTTGGTGTGATATTTGCAAATGTTGAGACAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCACGGGTTGCCATTCTTGGAAAGATCCCTAGGACCACAGTATACAGGAACACCCAACAGTATCCAGAAGCAACAAGGGTTCCGGGCATTCTCATTGTGAGAGTCGACTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGGTATTGAGATGGTTGGCAGATGAGGAAGAGCAAATAAAGAAGGCTTATTCAACAAAAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTACTGACATTGACACTAGCGGAATTCATGCCCTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTAGTTTTGGCAAACCCCGGGCCTGTAGTGATTGACAAACTCCATGCATCCGATCTTGCTAATCTGATTGGCGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGGGGTCTAG 1977 42.59 MDSRGHSNGGEPETKEMDIRNLSSSRNNTQYIHKVGVPPKQGFFNEFKARVKETFFADEPLRTFKDQSKSRKLVLGIQAIFPIFEWGRNYNLTKFRGDIIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTMLQKEIDYHTHPEAYLRLAFTATFFAGITQATLGMLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMRSVFEAAHHGWNWQTIVIGVAFLSFLLLAKYIGKKNKSLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIEKGINPSSVKQIYFTGEYLLKGFRIGAVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSLTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAAIIITAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFANVETGLLIAVSISFAKILLQVTRPRVAILGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERVLRWLADEEEQIKKAYSTKTQFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGPVVIDKLHASDLANLIGEDHIFLTVAEAVSSCSPKLVEGV 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3515599 3519613 - CmaCh15G007240.1 Cma15g00724 309874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma15g00724 658 Gene3D STAS domain 507 653 IPR036513 -
Cma15g00724 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Cma15g00724 658 PANTHER SULFATE TRANSPORTER 1.3 18 658 - -
Cma15g00724 658 MobiDBLite consensus disorder prediction 1 20 - -
Cma15g00724 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cma15g00724 658 Pfam STAS domain 528 646 IPR002645 -
Cma15g00724 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Cma15g00724 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Cma15g00724 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Cma15g00724 658 PANTHER SULFATE TRANSPORTER 18 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cma15g00724 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01741 Cma-Chr14:12745410 Cma15g00724 Cma-Chr15:3515599 0 dispersed
Cma15g00724 Cma-Chr15:3515599 Cma17g00816 Cma-Chr17:6397306 0 dispersed
Cma16g00681 Cma-Chr16:3543086 Cma15g00724 Cma-Chr15:3515599 0 dispersed
Cma19g00268 Cma-Chr19:1918558 Cma15g00724 Cma-Chr15:3515599 0 transposed
Cma01g01419 Cma-Chr1:10010272 Cma15g00724 Cma-Chr15:3515599 0 wgd
Cma15g00724 Cma-Chr15:3515599 Cma04g02315 Cma-Chr4:16105844 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma15g00724 K17470 - csv:101212138 1195.65